RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 DPP8Q6V1X1 898 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-221ENST00000553498 FOXD4L3Q6VB84 417 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-221ENST00000553498 GAS2L3Q86XJ1 694 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 SUPT20HQ8NEM7 779 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 SLC16A10Q8TF71 515 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 CNKSR1Q969H4 720 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 RTFDC1Q9BY42 306 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-221ENST00000553498 GDPD2Q9HCC8 539 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 MCM9Q9NXL9 1143 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 POLLQ9UGP5 575 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 UBR3Q6ZT12 1888 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 RANBP6O60518 1105 aaKnown RBP8.45□□□□□ -1.06
ATXN3-221ENST00000553498 CCDC192P0DO97 292 aa8.45□□□□□ -1.06
ATXN3-221ENST00000553498 CDC27P30260 824 aa8.45□□□□□ -1.06
ATXN3-221ENST00000553498 CLK2P49760 499 aaKnown RBP8.45□□□□□ -1.06
ATXN3-221ENST00000553498 HDLBPQ00341 1268 aaKnown RBP8.45□□□□□ -1.06
ATXN3-221ENST00000553498 KIF23Q02241 960 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-221ENST00000553498 HS1BP3Q53T59 392 aa8.45□□□□□ -1.06
ATXN3-221ENST00000553498 MFSD14BQ5SR56 506 aa8.45□□□□□ -1.06
ATXN3-221ENST00000553498 ADALQ6DHV7 355 aa8.45□□□□□ -1.06
ATXN3-221ENST00000553498 PTCRAQ6ISU1 281 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-221ENST00000553498 HHIPL2Q6UWX4 724 aa8.45□□□□□ -1.06
ATXN3-221ENST00000553498 RBM43Q6ZSC3 357 aaKnown RBP8.45□□□□□ -1.06
ATXN3-221ENST00000553498 CRACR2BQ8N4Y2 399 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-221ENST00000553498 ENAHQ8N8S7 591 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-221ENST00000553498 CAMKK2Q96RR4 588 aa8.45□□□□□ -1.06
ATXN3-221ENST00000553498 PPP1R9BQ96SB3 815 aa8.45□□□□□ -1.06
ATXN3-221ENST00000553498 LZTS2Q9BRK4 669 aa8.45□□□□□ -1.06
ATXN3-221ENST00000553498 NUP62CLQ9H1M0 184 aa8.45□□□□□ -1.06
ATXN3-221ENST00000553498 FOXP1Q9H334 677 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-221ENST00000553498 PKD2L1Q9P0L9 805 aa8.45□□□□□ -1.06
ATXN3-221ENST00000553498 NRXN2Q9P2S2 1712 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 MAST2Q6P0Q8 1798 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 TSPY2A6NKD2 308 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 PRPF3O43395 683 aaKnown RBP8.44□□□□□ -1.06
ATXN3-221ENST00000553498 PPP6R2O75170 966 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 BTDP43251 543 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 BAG6P46379 1132 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 PRR20EP86478 221 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 PRR20CP86479 221 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 PRR20DP86480 221 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 PRR20BP86481 221 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 PRR20AP86496 221 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 TROAPQ12815 778 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 SF3B2Q13435 895 aaKnown RBP8.44□□□□□ -1.06
ATXN3-221ENST00000553498 GNL2Q13823 731 aaKnown RBP8.44□□□□□ -1.06
ATXN3-221ENST00000553498 SF3A1Q15459 793 aaKnown RBP8.44□□□□□ -1.06
ATXN3-221ENST00000553498 MAP3K11Q16584 847 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 RILPL1Q5EBL4 403 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 SH3D19Q5HYK7 790 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 KRT40Q6A162 431 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 CCDC73Q6ZRK6 1079 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 ZNF444Q8N0Y2 327 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-221ENST00000553498 CTCFLQ8NI51 663 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-221ENST00000553498 BICD2Q8TD16 824 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 CHAMP1Q96JM3 812 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 SLC26A6Q9BXS9 759 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 VPS33BQ9H267 617 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 MKNK2Q9HBH9 465 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 BRMS1Q9HCU9 246 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 CEP131Q9UPN4 1083 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 TACC3Q9Y6A5 838 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 MYO3BQ8WXR4 1341 aa8.44□□□□□ -1.06
ATXN3-221ENST00000553498 CACNA1SQ13698 1873 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 NRG2O14511 850 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-221ENST00000553498 LCE2BO14633 110 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 BMP15O95972 392 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 MMP1P03956 469 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 POLR3DP05423 398 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-221ENST00000553498 SMARCA1P28370 1054 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 ME1P48163 572 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 RHBDL3P58872 404 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 FAM160A1Q05DH4 1040 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 LAPTM4AQ15012 233 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 SLC39A14Q15043 492 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 STK38Q15208 465 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 SKIV2LQ15477 1246 aaKnown RBP8.43□□□□□ -1.06
ATXN3-221ENST00000553498 PTPRNQ16849 979 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 STRIP1Q5VSL9 837 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 ANO1Q5XXA6 986 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 C16orf86Q6ZW13 317 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 NBPF11Q86T75 865 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 C2CD5Q86YS7 1000 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 CCDC125Q86Z20 511 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 TEX11Q8IYF3 940 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 LINC00301Q8NCQ3 95 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 SH3RF3Q8TEJ3 882 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-221ENST00000553498 FBXO41Q8TF61 875 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 USP28Q96RU2 1077 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 NUDT12Q9BQG2 462 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 TNMDQ9H2S6 317 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 CLSTN2Q9H4D0 955 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 KAT14Q9H8E8 782 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 TFIP11Q9UBB9 837 aaKnown RBP8.43□□□□□ -1.06
ATXN3-221ENST00000553498 SWAP70Q9UH65 585 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 LRRC37AA6NMS7 1700 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 A0A1B0GUL6 1792 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 LAMA4Q16363 1823 aa8.43□□□□□ -1.06
ATXN3-221ENST00000553498 SPTLC2O15270 562 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 KINO60870 393 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms