RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 CCDC39Q9UFE4 941 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 PCDHA6Q9UN73 950 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 PCDHA8Q9Y5H6 950 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 MYH15Q9Y2K3 1946 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 COL11A2P13942 1736 aaPredicted RBP10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 C10orf71Q711Q0 1435 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 DDTLA6NHG4 134 aaPredicted RBP10.74□□□□□ -0.69
MTHFD1-203ENST00000553391 WNT7AO00755 349 aa10.74□□□□□ -0.69
MTHFD1-203ENST00000553391 PDHBP11177 359 aa10.74□□□□□ -0.69
MTHFD1-203ENST00000553391 CLCN1P35523 988 aa10.74□□□□□ -0.69
MTHFD1-203ENST00000553391 TGFB2P61812 414 aa10.74□□□□□ -0.69
MTHFD1-203ENST00000553391 CFAP100Q494V2 611 aa10.74□□□□□ -0.69
MTHFD1-203ENST00000553391 PPP4R3BQ5MIZ7 849 aa10.74□□□□□ -0.69
MTHFD1-203ENST00000553391 WWC2Q6AWC2 1192 aa10.74□□□□□ -0.69
MTHFD1-203ENST00000553391 TATDN1Q6P1N9 297 aa10.74□□□□□ -0.69
MTHFD1-203ENST00000553391 C11orf57Q6ZUT1 292 aaPredicted RBP10.74□□□□□ -0.69
MTHFD1-203ENST00000553391 PIBF1Q8WXW3 757 aa10.74□□□□□ -0.69
MTHFD1-203ENST00000553391 BPIFA3Q9BQP9 254 aa10.74□□□□□ -0.69
MTHFD1-203ENST00000553391 CSRNP2Q9H175 543 aa10.74□□□□□ -0.69
MTHFD1-203ENST00000553391 LAMB1P07942 1786 aa10.74□□□□□ -0.69
MTHFD1-203ENST00000553391 QSER1Q2KHR3 1735 aa10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 TTLL1O95922 423 aa10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 SARSP49591 514 aaKnown RBP10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 ATP2C1P98194 919 aaPredicted RBP10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 ASPRV1Q53RT3 343 aa10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 SPECC1Q5M775 1068 aa10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 RSBN1LQ6PCB5 846 aaPredicted RBP10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 SARM1Q6SZW1 724 aa10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 PIK3AP1Q6ZUJ8 805 aa10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 USP49Q70CQ1 688 aa10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 SIAH1Q8IUQ4 282 aa10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 DHX40Q8IX18 779 aaKnown RBP10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 ERCC4Q92889 916 aaPredicted RBP10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 GPKOWQ92917 476 aaPredicted RBP eCLIP10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 RRP36Q96EU6 259 aaKnown RBP10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 UBA5Q9GZZ9 404 aa10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 ZMYND12Q9H0C1 365 aa10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 TDRD3Q9H7E2 651 aaKnown RBP10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 DNAJC18Q9H819 358 aa10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 VAT1LQ9HCJ6 419 aa10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 NYAP2Q9P242 653 aa10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 SERTAD1Q9UHV2 236 aa10.73□□□□□ -0.69
MTHFD1-203ENST00000553391 ESYT2A0FGR8 921 aa10.72□□□□□ -0.69
MTHFD1-203ENST00000553391 SLURP2P0DP57 97 aa10.72□□□□□ -0.69
MTHFD1-203ENST00000553391 ZNF75DP51815 510 aa10.72□□□□□ -0.69
MTHFD1-203ENST00000553391 RBM5P52756 815 aaKnown RBP eCLIP10.72□□□□□ -0.69
MTHFD1-203ENST00000553391 ZNF543Q08ER8 600 aa10.72□□□□□ -0.69
MTHFD1-203ENST00000553391 PTGDRQ13258 359 aa10.72□□□□□ -0.69
MTHFD1-203ENST00000553391 IL17AQ16552 155 aa10.72□□□□□ -0.69
MTHFD1-203ENST00000553391 CERKLQ49MI3 558 aaPredicted RBP10.72□□□□□ -0.69
MTHFD1-203ENST00000553391 NT5DC1Q5TFE4 455 aa10.72□□□□□ -0.69
MTHFD1-203ENST00000553391 KANK3Q6NY19 840 aa10.72□□□□□ -0.69
MTHFD1-203ENST00000553391 SH3RF1Q7Z6J0 888 aa10.72□□□□□ -0.69
MTHFD1-203ENST00000553391 PLA2G4DQ86XP0 818 aa10.72□□□□□ -0.69
MTHFD1-203ENST00000553391 CNNM3Q8NE01 707 aa10.72□□□□□ -0.69
MTHFD1-203ENST00000553391 CCDC148Q8NFR7 591 aa10.72□□□□□ -0.69
MTHFD1-203ENST00000553391 MTMR8Q96EF0 704 aa10.72□□□□□ -0.69
MTHFD1-203ENST00000553391 PIGSQ96S52 555 aa10.72□□□□□ -0.69
MTHFD1-203ENST00000553391 CPVLQ9H3G5 476 aa10.72□□□□□ -0.69
MTHFD1-203ENST00000553391 A0A087WWV3 80 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 SMCO2A6NFE2 343 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 hCG_1984214I3L0E3 225 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 POLR2DO15514 142 aaKnown RBP10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 ACTN4O43707 911 aaKnown RBP10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 CACNB3P54284 484 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 TCP10Q12799 353 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 DDX60LQ5H9U9 1706 aaKnown RBP10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 SOGA3Q5TF21 947 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 ARL6IP4Q66PJ3 421 aaKnown RBP10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 RASGRP2Q7LDG7 609 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 HEATR3Q7Z4Q2 680 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 CEP57L1Q8IYX8 460 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 LARGE2Q8N3Y3 721 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 ZNF713Q8N859 430 aaPredicted RBP10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 MTMR14Q8NCE2 650 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 NAV1Q8NEY1 1877 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 CCDC12Q8WUD4 166 aaPredicted RBP10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 NAT10Q9H0A0 1025 aaKnown RBP10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 KANSL2Q9H9L4 492 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 JMJD4Q9H9V9 463 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 C6orf50Q9HD87 102 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 PIM2Q9P1W9 311 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 ZNRF3Q9ULT6 936 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 MTMR7Q9Y216 660 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 ZKSCAN5Q9Y2L8 839 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 PCDHA5Q9Y5H7 936 aa10.71□□□□□ -0.69
MTHFD1-203ENST00000553391 MYH1P12882 1939 aa10.7□□□□□ -0.7
MTHFD1-203ENST00000553391 CDK5RAP2Q96SN8 1893 aa10.7□□□□□ -0.7
MTHFD1-203ENST00000553391 ATRNL1Q5VV63 1379 aa10.7□□□□□ -0.7
MTHFD1-203ENST00000553391 PNMA6FA0A0J9YX94 578 aa10.7□□□□□ -0.7
MTHFD1-203ENST00000553391 SMTNL1A8MU46 457 aa10.7□□□□□ -0.7
MTHFD1-203ENST00000553391 PSMD14O00487 310 aa10.7□□□□□ -0.7
MTHFD1-203ENST00000553391 FOXN1O15353 648 aa10.7□□□□□ -0.7
MTHFD1-203ENST00000553391 ZNF500O60304 480 aaPredicted RBP10.7□□□□□ -0.7
MTHFD1-203ENST00000553391 TPM3P06753 285 aa10.7□□□□□ -0.7
MTHFD1-203ENST00000553391 GNA11P29992 359 aa10.7□□□□□ -0.7
MTHFD1-203ENST00000553391 PNOCQ13519 176 aa10.7□□□□□ -0.7
MTHFD1-203ENST00000553391 NCAPHQ15003 741 aa10.7□□□□□ -0.7
MTHFD1-203ENST00000553391 TTBK2Q6IQ55 1244 aa10.7□□□□□ -0.7
MTHFD1-203ENST00000553391 KRT25Q7Z3Z0 450 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms