RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 PTPREP23469 700 aa11.94□□□□□ -0.5
ACTN1-208ENST00000553370 ICA1Q05084 483 aa11.94□□□□□ -0.5
ACTN1-208ENST00000553370 NCAPG2Q86XI2 1143 aa11.94□□□□□ -0.5
ACTN1-208ENST00000553370 TDHQ8IZJ6 230 aa11.94□□□□□ -0.5
ACTN1-208ENST00000553370 LCORLQ8N3X6 602 aa11.94□□□□□ -0.5
ACTN1-208ENST00000553370 SENP6Q9GZR1 1112 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-208ENST00000553370 ARMT1Q9H993 441 aa11.94□□□□□ -0.5
ACTN1-208ENST00000553370 HOXC10Q9NYD6 342 aa11.94□□□□□ -0.5
ACTN1-208ENST00000553370 LTBP2Q14767 1821 aa11.93□□□□□ -0.5
ACTN1-208ENST00000553370 RAB11FIP3O75154 756 aa11.93□□□□□ -0.5
ACTN1-208ENST00000553370 CNMDO75829 334 aa11.93□□□□□ -0.5
ACTN1-208ENST00000553370 BMP8BP34820 402 aa11.93□□□□□ -0.5
ACTN1-208ENST00000553370 ATN1P54259 1190 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-208ENST00000553370 MDM2Q00987 491 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-208ENST00000553370 CAMK2BQ13554 666 aa11.93□□□□□ -0.5
ACTN1-208ENST00000553370 GRB14Q14449 540 aa11.93□□□□□ -0.5
ACTN1-208ENST00000553370 COG2Q14746 738 aa11.93□□□□□ -0.5
ACTN1-208ENST00000553370 RPAP2Q8IXW5 612 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-208ENST00000553370 SPICE1Q8N0Z3 855 aa11.93□□□□□ -0.5
ACTN1-208ENST00000553370 DEFB123Q8N688 67 aa11.93□□□□□ -0.5
ACTN1-208ENST00000553370 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.93□□□□□ -0.5
ACTN1-208ENST00000553370 USP6NLQ92738 828 aa11.93□□□□□ -0.5
ACTN1-208ENST00000553370 GDF15Q99988 308 aa11.93□□□□□ -0.5
ACTN1-208ENST00000553370 BOLA2Q9H3K6 86 aa11.93□□□□□ -0.5
ACTN1-208ENST00000553370 BTBD7Q9P203 1132 aa11.93□□□□□ -0.5
ACTN1-208ENST00000553370 DDX20Q9UHI6 824 aaKnown RBP11.93□□□□□ -0.5
ACTN1-208ENST00000553370 COG6Q9Y2V7 657 aa11.93□□□□□ -0.5
ACTN1-208ENST00000553370 CYP2D6P10635 497 aa11.92□□□□□ -0.5
ACTN1-208ENST00000553370 ADORA2AP29274 412 aa11.92□□□□□ -0.5
ACTN1-208ENST00000553370 CYP2C19P33261 490 aa11.92□□□□□ -0.5
ACTN1-208ENST00000553370 LRRC26Q2I0M4 334 aa11.92□□□□□ -0.5
ACTN1-208ENST00000553370 ZSCAN25Q6NSZ9 544 aa11.92□□□□□ -0.5
ACTN1-208ENST00000553370 LBX2Q6XYB7 198 aa11.92□□□□□ -0.5
ACTN1-208ENST00000553370 MB21D1Q8N884 522 aa11.92□□□□□ -0.5
ACTN1-208ENST00000553370 SLC44A5Q8NCS7 719 aa11.92□□□□□ -0.5
ACTN1-208ENST00000553370 LPAR1Q92633 364 aa11.92□□□□□ -0.5
ACTN1-208ENST00000553370 DYNLL2Q96FJ2 89 aa11.92□□□□□ -0.5
ACTN1-208ENST00000553370 SPATC1LQ9H0A9 340 aa11.92□□□□□ -0.5
ACTN1-208ENST00000553370 DCP1AQ9NPI6 582 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-208ENST00000553370 FLRT1Q9NZU1 646 aa11.92□□□□□ -0.5
ACTN1-208ENST00000553370 STRNO43815 780 aa11.91□□□□□ -0.5
ACTN1-208ENST00000553370 ERCC3P19447 782 aa11.91□□□□□ -0.5
ACTN1-208ENST00000553370 GUCY1A2P33402 732 aa11.91□□□□□ -0.5
ACTN1-208ENST00000553370 LHX8Q68G74 356 aa11.91□□□□□ -0.5
ACTN1-208ENST00000553370 CLEC10AQ8IUN9 316 aa11.91□□□□□ -0.5
ACTN1-208ENST00000553370 ARRDC4Q8NCT1 418 aa11.91□□□□□ -0.5
ACTN1-208ENST00000553370 GPATCH3Q96I76 525 aa11.91□□□□□ -0.5
ACTN1-208ENST00000553370 MOV10L1Q9BXT6 1211 aaKnown RBP11.91□□□□□ -0.5
ACTN1-208ENST00000553370 MROH8Q9H579 483 aa11.91□□□□□ -0.5
ACTN1-208ENST00000553370 GOPCQ9HD26 462 aa11.91□□□□□ -0.5
ACTN1-208ENST00000553370 PRDM5Q9NQX1 630 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-208ENST00000553370 ATP8A2Q9NTI2 1148 aa11.91□□□□□ -0.5
ACTN1-208ENST00000553370 ATP11BQ9Y2G3 1177 aa11.91□□□□□ -0.5
ACTN1-208ENST00000553370 CTDP1Q9Y5B0 961 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-208ENST00000553370 DNM1LO00429 736 aa11.9□□□□□ -0.5
ACTN1-208ENST00000553370 WDR46O15213 610 aaKnown RBP11.9□□□□□ -0.5
ACTN1-208ENST00000553370 COL6A1P12109 1028 aa11.9□□□□□ -0.5
ACTN1-208ENST00000553370 FCER1AP12319 257 aa11.9□□□□□ -0.5
ACTN1-208ENST00000553370 AKR1B1P15121 316 aa11.9□□□□□ -0.5
ACTN1-208ENST00000553370 ADD2P35612 726 aa11.9□□□□□ -0.5
ACTN1-208ENST00000553370 GABPAQ06546 454 aa11.9□□□□□ -0.5
ACTN1-208ENST00000553370 GJC2Q5T442 439 aaPredicted RBP11.9□□□□□ -0.5
ACTN1-208ENST00000553370 ANO1Q5XXA6 986 aa11.9□□□□□ -0.5
ACTN1-208ENST00000553370 SHCBP1Q8NEM2 672 aa11.9□□□□□ -0.5
ACTN1-208ENST00000553370 NPLOC4Q8TAT6 608 aa11.9□□□□□ -0.5
ACTN1-208ENST00000553370 CCDC17Q96LX7 622 aa11.9□□□□□ -0.5
ACTN1-208ENST00000553370 ISY1Q9ULR0 285 aaKnown RBP11.9□□□□□ -0.5
ACTN1-208ENST00000553370 SLC4A4Q9Y6R1 1079 aa11.9□□□□□ -0.5
ACTN1-208ENST00000553370 A0A1W2PRG0 241 aa11.89□□□□□ -0.51
ACTN1-208ENST00000553370 TCRBV5S4A2TA0A5A2 114 aa11.89□□□□□ -0.51
ACTN1-208ENST00000553370 PRKAB2O43741 272 aa11.89□□□□□ -0.51
ACTN1-208ENST00000553370 HOXC6P09630 235 aa11.89□□□□□ -0.51
ACTN1-208ENST00000553370 ATP5JP18859 108 aa11.89□□□□□ -0.51
ACTN1-208ENST00000553370 RTP1P59025 263 aa11.89□□□□□ -0.51
ACTN1-208ENST00000553370 KCTD2Q14681 263 aa11.89□□□□□ -0.51
ACTN1-208ENST00000553370 OLFML2BQ68BL8 750 aa11.89□□□□□ -0.51
ACTN1-208ENST00000553370 POTEEQ6S8J3 1075 aa11.89□□□□□ -0.51
ACTN1-208ENST00000553370 Q7L0L9 218 aa11.89□□□□□ -0.51
ACTN1-208ENST00000553370 ATG4CQ96DT6 458 aa11.89□□□□□ -0.51
ACTN1-208ENST00000553370 MMP19Q99542 508 aa11.89□□□□□ -0.51
ACTN1-208ENST00000553370 LRRCC1Q9C099 1032 aa11.89□□□□□ -0.51
ACTN1-208ENST00000553370 VCPKMTQ9H867 229 aa11.89□□□□□ -0.51
ACTN1-208ENST00000553370 GREB1LQ9C091 1923 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-208ENST00000553370 CYP2D7A0A087X1C5 515 aa11.88□□□□□ -0.51
ACTN1-208ENST00000553370 USP17L12C9JPN9 530 aa11.88□□□□□ -0.51
ACTN1-208ENST00000553370 USP17L21D6R901 530 aa11.88□□□□□ -0.51
ACTN1-208ENST00000553370 SLC25A27O95847 323 aa11.88□□□□□ -0.51
ACTN1-208ENST00000553370 CYBAP13498 195 aa11.88□□□□□ -0.51
ACTN1-208ENST00000553370 SLC4A3P48751 1232 aa11.88□□□□□ -0.51
ACTN1-208ENST00000553370 CDK8P49336 464 aa11.88□□□□□ -0.51
ACTN1-208ENST00000553370 LRIT3Q3SXY7 679 aa11.88□□□□□ -0.51
ACTN1-208ENST00000553370 GPR153Q6NV75 609 aa11.88□□□□□ -0.51
ACTN1-208ENST00000553370 STK11IPQ8N1F8 1099 aa11.88□□□□□ -0.51
ACTN1-208ENST00000553370 HAUS7Q99871 368 aa11.88□□□□□ -0.51
ACTN1-208ENST00000553370 MKNK2Q9HBH9 465 aa11.88□□□□□ -0.51
ACTN1-208ENST00000553370 ARPP21Q9UBL0 812 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-208ENST00000553370 DLL1O00548 723 aa11.87□□□□□ -0.51
ACTN1-208ENST00000553370 SEPT4O43236 478 aa11.87□□□□□ -0.51
ACTN1-208ENST00000553370 RARBP10826 455 aa11.87□□□□□ -0.51
ACTN1-208ENST00000553370 COPB2P35606 906 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms