RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 PCDHAC2Q9Y5I4 1007 aa6.34□□□□□ -1.39
TMEM106C-221ENST00000553217 ITIH6Q6UXX5 1313 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 H7C1D1 291 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 ABLIM1O14639 778 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 PPP6R2O75170 966 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 ALDH1L1O75891 902 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 FSBPO95073 299 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 IGKV5-2P06315 115 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 EPB41P11171 864 aaKnown RBP6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 RPS6KB1P23443 525 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 CMA1P23946 247 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 ERCC5P28715 1186 aaPredicted RBP6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 PPP1R2P41236 205 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 GNG11P61952 73 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 RPS8P62241 208 aaKnown RBP6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 AKAP17AQ02040 695 aaKnown RBP6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 MAP2K1Q02750 393 aaPredicted RBP6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 LRMPQ12912 555 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 TNIP1Q15025 636 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 RBBP5Q15291 538 aaKnown RBP6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 IMMTQ16891 758 aaKnown RBP6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 TXNRD3Q86VQ6 643 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 PPFIBP1Q86W92 1011 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 TMTC1Q8IUR5 882 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 VSTM4Q8IW00 320 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 TEX11Q8IYF3 940 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 PLCD3Q8N3E9 789 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 ZBTB38Q8NAP3 1195 aaPredicted RBP6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 PRPF38AQ8NAV1 312 aaKnown RBP6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 CAGE1Q8TC20 777 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 WASF1Q92558 559 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 SECISBP2LQ93073 1101 aaKnown RBP6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 CCDC102AQ96A19 550 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 ZNF274Q96GC6 653 aaPredicted RBP6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 SH3GL3Q99963 347 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 PLCD4Q9BRC7 762 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 PARD6BQ9BYG5 372 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 TRIM6Q9C030 488 aaPredicted RBP6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 MCOLN1Q9GZU1 580 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 GREM2Q9H772 168 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 GDPD2Q9HCC8 539 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 LUC7LQ9NQ29 371 aaKnown RBP6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 VPS18Q9P253 973 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 SWAP70Q9UH65 585 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 L1RE1Q9UN81 338 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 PPP2R2CQ9Y2T4 447 aa6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 ZNF646O15015 1829 aaPredicted RBP6.33□□□□□ -1.4
TMEM106C-221ENST00000553217 PI4KAP2A4QPH2 592 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 GOLGA6L10A6NI86 522 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 FAM155AB1AL88 458 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 G3V3G9 751 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 BUB1BO60566 1050 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 PDE8AO60658 829 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 IFIT2P09913 472 aaKnown RBP6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 GCFC2P16383 781 aaKnown RBP6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 ECE1P42892 770 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 ME1P48163 572 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 SMTNP53814 917 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 KRT83P78385 493 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 KIF23Q02241 960 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 DGKZQ13574 1117 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 SCARF1Q14162 830 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 POLA2Q14181 598 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 CLUL1Q15846 466 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 CFAP100Q494V2 611 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 BEND6Q5SZJ8 279 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 DCAF8Q5TAQ9 597 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 EMC10Q5UCC4 262 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 ANGEL2Q5VTE6 544 aaKnown RBP6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 EMBQ6PCB8 327 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 CRELD2Q6UXH1 353 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 CDC37L1Q7L3B6 337 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 TMC6Q7Z403 805 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 DHX40Q8IX18 779 aaKnown RBP6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 CKAP2LQ8IYA6 745 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 CCDC170Q8IYT3 715 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 OTUD6BQ8N6M0 293 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 PI4KAP1Q8N8J0 262 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 NEK11Q8NG66 645 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 SMARCC2Q8TAQ2 1214 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 RHPN1Q8TCX5 695 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 CCDC12Q8WUD4 166 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 TSC1Q92574 1164 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 HOOK2Q96ED9 719 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 CDCA5Q96FF9 252 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 GDAP1L1Q96MZ0 367 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 NAPGQ99747 312 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 BEGAINQ9BUH8 593 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 METTL22Q9BUU2 404 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 C1orf115Q9H7X2 142 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 GBA2Q9HCG7 927 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 CWC25Q9NXE8 425 aaPredicted RBP6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 GGA1Q9UJY5 639 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 SUFUQ9UMX1 484 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 MYH3P11055 1940 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 PSME4Q14997 1843 aa6.32□□□□□ -1.4
TMEM106C-221ENST00000553217 FAM237AA0A1B0GTK4 181 aa6.31□□□□□ -1.4
TMEM106C-221ENST00000553217 F6X3S4 739 aa6.31□□□□□ -1.4
TMEM106C-221ENST00000553217 UBE2Q2LH0YL09 131 aa6.31□□□□□ -1.4
TMEM106C-221ENST00000553217 PFKFB2O60825 505 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms