RNA–Protein interactions for RNA: ENST00000553038.5

ACTR6-213, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 1 (best)

Gene ACTR6, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-213ENST00000553038 GPC2Q8N158 579 aa16.19■□□□□ 0.18
ACTR6-213ENST00000553038 LZTS2Q9BRK4 669 aa16.19■□□□□ 0.18
ACTR6-213ENST00000553038 TSPY26PQ9H489 355 aa16.19■□□□□ 0.18
ACTR6-213ENST00000553038 GOLPH3LQ9H4A5 285 aa16.19■□□□□ 0.18
ACTR6-213ENST00000553038 KANSL2Q9H9L4 492 aa16.19■□□□□ 0.18
ACTR6-213ENST00000553038 HACL1Q9UJ83 578 aa16.19■□□□□ 0.18
ACTR6-213ENST00000553038 PCDHA7Q9UN72 937 aa16.19■□□□□ 0.18
ACTR6-213ENST00000553038 MMP1P03956 469 aa16.19■□□□□ 0.18
ACTR6-213ENST00000553038 CCAR1Q8IX12 1150 aaKnown RBP16.19■□□□□ 0.18
ACTR6-213ENST00000553038 OXER1Q8TDS5 423 aa16.19■□□□□ 0.18
ACTR6-213ENST00000553038 VAT1LQ9HCJ6 419 aa16.19■□□□□ 0.18
ACTR6-213ENST00000553038 BRMS1Q9HCU9 246 aa16.19■□□□□ 0.18
ACTR6-213ENST00000553038 SIPA1L1O43166 1804 aa16.19■□□□□ 0.18
ACTR6-213ENST00000553038 MYH6P13533 1939 aa16.18■□□□□ 0.18
ACTR6-213ENST00000553038 EEF2P13639 858 aaKnown RBP16.18■□□□□ 0.18
ACTR6-213ENST00000553038 VEGFAP15692 232 aaPredicted RBP16.18■□□□□ 0.18
ACTR6-213ENST00000553038 ME1P48163 572 aa16.18■□□□□ 0.18
ACTR6-213ENST00000553038 NASPP49321 788 aaPredicted RBP16.18■□□□□ 0.18
ACTR6-213ENST00000553038 ANO1Q5XXA6 986 aa16.18■□□□□ 0.18
ACTR6-213ENST00000553038 CDAN1Q8IWY9 1227 aa16.18■□□□□ 0.18
ACTR6-213ENST00000553038 GPCPD1Q9NPB8 672 aa16.18■□□□□ 0.18
ACTR6-213ENST00000553038 POLR3EQ9NVU0 708 aa16.18■□□□□ 0.18
ACTR6-213ENST00000553038 BAZ2BQ9UIF8 2168 aaKnown RBP16.18■□□□□ 0.18
ACTR6-213ENST00000553038 ASTN2O75129 1339 aaPredicted RBP16.18■□□□□ 0.18
ACTR6-213ENST00000553038 PALM3A6NDB9 673 aaPredicted RBP16.18■□□□□ 0.18
ACTR6-213ENST00000553038 PDHBP11177 359 aa16.18■□□□□ 0.18
ACTR6-213ENST00000553038 SCG2P13521 617 aa16.18■□□□□ 0.18
ACTR6-213ENST00000553038 LMOD1P29536 600 aaPredicted RBP16.18■□□□□ 0.18
ACTR6-213ENST00000553038 STK38Q15208 465 aa16.18■□□□□ 0.18
ACTR6-213ENST00000553038 C9orf131Q5VYM1 1079 aa16.18■□□□□ 0.18
ACTR6-213ENST00000553038 HOMER1Q86YM7 354 aa16.18■□□□□ 0.18
ACTR6-213ENST00000553038 DIS3L2Q8IYB7 885 aaKnown RBP16.18■□□□□ 0.18
ACTR6-213ENST00000553038 RNF214Q8ND24 703 aa16.18■□□□□ 0.18
ACTR6-213ENST00000553038 NAP1L5Q96NT1 182 aaPredicted RBP16.18■□□□□ 0.18
ACTR6-213ENST00000553038 CPVLQ9H3G5 476 aa16.18■□□□□ 0.18
ACTR6-213ENST00000553038 GPRC5DQ9NZD1 345 aa16.18■□□□□ 0.18
ACTR6-213ENST00000553038 SEC63Q9UGP8 760 aaKnown RBP16.18■□□□□ 0.18
ACTR6-213ENST00000553038 ESPNB1AK53 854 aa16.17■□□□□ 0.18
ACTR6-213ENST00000553038 LETM1O95202 739 aaPredicted RBP16.17■□□□□ 0.18
ACTR6-213ENST00000553038 NLRP5P59047 1200 aa16.17■□□□□ 0.18
ACTR6-213ENST00000553038 NR5A1Q13285 461 aa16.17■□□□□ 0.18
ACTR6-213ENST00000553038 ASPRV1Q53RT3 343 aa16.17■□□□□ 0.18
ACTR6-213ENST00000553038 HEATR3Q7Z4Q2 680 aa16.17■□□□□ 0.18
ACTR6-213ENST00000553038 METTL16Q86W50 562 aaKnown RBP16.17■□□□□ 0.18
ACTR6-213ENST00000553038 FUCA2Q9BTY2 467 aa16.17■□□□□ 0.18
ACTR6-213ENST00000553038 NUP62CLQ9H1M0 184 aa16.17■□□□□ 0.18
ACTR6-213ENST00000553038 SPTLC2O15270 562 aa16.16■□□□□ 0.18
ACTR6-213ENST00000553038 DDNO94850 711 aaPredicted RBP16.16■□□□□ 0.18
ACTR6-213ENST00000553038 YEATS4O95619 227 aa16.16■□□□□ 0.18
ACTR6-213ENST00000553038 NOVP48745 357 aa16.16■□□□□ 0.18
ACTR6-213ENST00000553038 SF3A1Q15459 793 aaKnown RBP16.16■□□□□ 0.18
ACTR6-213ENST00000553038 PFKFB3Q16875 520 aaPredicted RBP16.16■□□□□ 0.18
ACTR6-213ENST00000553038 SLC35G1Q2M3R5 365 aa16.16■□□□□ 0.18
ACTR6-213ENST00000553038 RRP36Q96EU6 259 aaKnown RBP16.16■□□□□ 0.18
ACTR6-213ENST00000553038 UBA5Q9GZZ9 404 aa16.16■□□□□ 0.18
ACTR6-213ENST00000553038 MARCKSP29966 332 aaPredicted RBP16.16■□□□□ 0.18
ACTR6-213ENST00000553038 KRT2P35908 639 aa16.16■□□□□ 0.18
ACTR6-213ENST00000553038 TOB1P50616 345 aaPredicted RBP16.16■□□□□ 0.18
ACTR6-213ENST00000553038 ANGEL2Q5VTE6 544 aaKnown RBP16.16■□□□□ 0.18
ACTR6-213ENST00000553038 NOSTRINQ8IVI9 506 aa16.16■□□□□ 0.18
ACTR6-213ENST00000553038 TRPM4Q8TD43 1214 aa16.16■□□□□ 0.18
ACTR6-213ENST00000553038 GPKOWQ92917 476 aaPredicted RBP eCLIP16.16■□□□□ 0.18
ACTR6-213ENST00000553038 NYAP2Q9P242 653 aa16.16■□□□□ 0.18
ACTR6-213ENST00000553038 EPS15P42566 896 aa16.15■□□□□ 0.18
ACTR6-213ENST00000553038 SNW1Q13573 536 aaKnown RBP16.15■□□□□ 0.18
ACTR6-213ENST00000553038 PTPAQ15257 358 aa16.15■□□□□ 0.18
ACTR6-213ENST00000553038 CKAP2LQ8IYA6 745 aa16.15■□□□□ 0.18
ACTR6-213ENST00000553038 FSIP1Q8NA03 581 aa16.15■□□□□ 0.18
ACTR6-213ENST00000553038 DEFB129Q9H1M3 183 aa16.15■□□□□ 0.18
ACTR6-213ENST00000553038 CLSTN2Q9H4D0 955 aa16.15■□□□□ 0.18
ACTR6-213ENST00000553038 ARHGEF10LQ9HCE6 1279 aa16.15■□□□□ 0.18
ACTR6-213ENST00000553038 FAM205CA6NFA0 338 aa16.14■□□□□ 0.17
ACTR6-213ENST00000553038 RRP9O43818 475 aaKnown RBP16.14■□□□□ 0.17
ACTR6-213ENST00000553038 SLC1A4P43007 532 aa16.14■□□□□ 0.17
ACTR6-213ENST00000553038 IKQ13123 557 aaPredicted RBP16.14■□□□□ 0.17
ACTR6-213ENST00000553038 RRP1BQ14684 758 aaKnown RBP16.14■□□□□ 0.17
ACTR6-213ENST00000553038 SLC39A14Q15043 492 aa16.14■□□□□ 0.17
ACTR6-213ENST00000553038 SLFN13Q68D06 897 aa16.14■□□□□ 0.17
ACTR6-213ENST00000553038 ADALQ6DHV7 355 aa16.14■□□□□ 0.17
ACTR6-213ENST00000553038 KCTD1Q719H9 257 aa16.14■□□□□ 0.17
ACTR6-213ENST00000553038 APOBEC3FQ8IUX4 373 aaKnown RBP16.14■□□□□ 0.17
ACTR6-213ENST00000553038 ENGASEQ8NFI3 743 aa16.14■□□□□ 0.17
ACTR6-213ENST00000553038 TRIM44Q96DX7 344 aaPredicted RBP16.14■□□□□ 0.17
ACTR6-213ENST00000553038 PHF20Q9BVI0 1012 aa16.14■□□□□ 0.17
ACTR6-213ENST00000553038 SPZ1Q9BXG8 430 aa16.14■□□□□ 0.17
ACTR6-213ENST00000553038 FOXP1Q9H334 677 aaPredicted RBP16.14■□□□□ 0.17
ACTR6-213ENST00000553038 DDX19AQ9NUU7 478 aaKnown RBP16.14■□□□□ 0.17
ACTR6-213ENST00000553038 ADAMTS3O15072 1205 aa16.14■□□□□ 0.17
ACTR6-213ENST00000553038 EARS2Q5JPH6 523 aaKnown RBP16.14■□□□□ 0.17
ACTR6-213ENST00000553038 AXDND1Q5T1B0 1012 aaPredicted RBP16.14■□□□□ 0.17
ACTR6-213ENST00000553038 KCNG4Q8TDN1 519 aa16.14■□□□□ 0.17
ACTR6-213ENST00000553038 TNMDQ9H2S6 317 aa16.14■□□□□ 0.17
ACTR6-213ENST00000553038 GGA3Q9NZ52 723 aa16.14■□□□□ 0.17
ACTR6-213ENST00000553038 A0A1B0GVL5 298 aa16.13■□□□□ 0.17
ACTR6-213ENST00000553038 CYTH3O43739 400 aa16.13■□□□□ 0.17
ACTR6-213ENST00000553038 TBC1D12O60347 775 aa16.13■□□□□ 0.17
ACTR6-213ENST00000553038 ATP2B1P20020 1258 aa16.13■□□□□ 0.17
ACTR6-213ENST00000553038 JAG1P78504 1218 aa16.13■□□□□ 0.17
ACTR6-213ENST00000553038 ZNF543Q08ER8 600 aa16.13■□□□□ 0.17
ACTR6-213ENST00000553038 NPY5RQ15761 445 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms