RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 SIAH1Q8IUQ4 282 aa11.79□□□□□ -0.52
MMP19-209ENST00000552872 C17orf53Q8N3J3 647 aaPredicted RBP11.79□□□□□ -0.52
MMP19-209ENST00000552872 FAM184AQ8NB25 1140 aa11.79□□□□□ -0.52
MMP19-209ENST00000552872 PHKBQ93100 1093 aa11.79□□□□□ -0.52
MMP19-209ENST00000552872 FEZ1Q99689 392 aa11.79□□□□□ -0.52
MMP19-209ENST00000552872 GPBP1L1Q9HC44 474 aaPredicted RBP11.79□□□□□ -0.52
MMP19-209ENST00000552872 SPTLC3Q9NUV7 552 aa11.79□□□□□ -0.52
MMP19-209ENST00000552872 SLC12A7Q9Y666 1083 aa11.79□□□□□ -0.52
MMP19-209ENST00000552872 FRMPD2Q68DX3 1309 aaPredicted RBP11.79□□□□□ -0.52
MMP19-209ENST00000552872 A0A1W2PRG0 241 aa11.78□□□□□ -0.52
MMP19-209ENST00000552872 SART3Q15020 963 aaKnown RBP11.78□□□□□ -0.52
MMP19-209ENST00000552872 FOXD4L6Q3SYB3 417 aaPredicted RBP11.78□□□□□ -0.52
MMP19-209ENST00000552872 USP17L2Q6R6M4 530 aa11.78□□□□□ -0.52
MMP19-209ENST00000552872 FOXD4L3Q6VB84 417 aaPredicted RBP11.78□□□□□ -0.52
MMP19-209ENST00000552872 NEDD1Q8NHV4 660 aa11.78□□□□□ -0.52
MMP19-209ENST00000552872 KIAA1755Q5JYT7 1200 aa11.78□□□□□ -0.52
MMP19-209ENST00000552872 PNMA8AQ86V59 439 aaPredicted RBP11.78□□□□□ -0.52
MMP19-209ENST00000552872 ZNF654Q8IZM8 581 aa11.78□□□□□ -0.52
MMP19-209ENST00000552872 STAG2Q8N3U4 1231 aa11.78□□□□□ -0.52
MMP19-209ENST00000552872 GJB4Q9NTQ9 266 aa11.78□□□□□ -0.52
MMP19-209ENST00000552872 GEMIN8Q9NWZ8 242 aaKnown RBP11.78□□□□□ -0.52
MMP19-209ENST00000552872 MTMR4Q9NYA4 1195 aa11.78□□□□□ -0.52
MMP19-209ENST00000552872 OGFRQ9NZT2 677 aa11.78□□□□□ -0.52
MMP19-209ENST00000552872 SWAP70Q9UH65 585 aa11.78□□□□□ -0.52
MMP19-209ENST00000552872 ZBTB21Q9ULJ3 1066 aa11.78□□□□□ -0.52
MMP19-209ENST00000552872 USP17L5A8MUK1 530 aa11.77□□□□□ -0.52
MMP19-209ENST00000552872 USP2O75604 605 aaPredicted RBP11.77□□□□□ -0.52
MMP19-209ENST00000552872 PLEKHA8P1O95397 391 aa11.77□□□□□ -0.52
MMP19-209ENST00000552872 CAP2P40123 477 aa11.77□□□□□ -0.52
MMP19-209ENST00000552872 ICA1Q05084 483 aa11.77□□□□□ -0.52
MMP19-209ENST00000552872 GABPB1Q06547 395 aaPredicted RBP11.77□□□□□ -0.52
MMP19-209ENST00000552872 NBPF11Q86T75 865 aa11.77□□□□□ -0.52
MMP19-209ENST00000552872 PNMA1Q8ND90 353 aa11.77□□□□□ -0.52
MMP19-209ENST00000552872 KAT14Q9H8E8 782 aa11.77□□□□□ -0.52
MMP19-209ENST00000552872 ZNF287Q9HBT7 754 aa11.77□□□□□ -0.52
MMP19-209ENST00000552872 HERC5Q9UII4 1024 aaKnown RBP11.77□□□□□ -0.52
MMP19-209ENST00000552872 OTOFQ9HC10 1997 aa11.77□□□□□ -0.53
MMP19-209ENST00000552872 ZBTB43O43298 467 aa11.77□□□□□ -0.53
MMP19-209ENST00000552872 CTDNEP1O95476 244 aa11.77□□□□□ -0.53
MMP19-209ENST00000552872 METAP2P50579 478 aaKnown RBP eCLIP11.77□□□□□ -0.53
MMP19-209ENST00000552872 UVSSAQ2YD98 709 aa11.77□□□□□ -0.53
MMP19-209ENST00000552872 METTL16Q86W50 562 aaKnown RBP11.77□□□□□ -0.53
MMP19-209ENST00000552872 TMEM87BQ96K49 555 aa11.77□□□□□ -0.53
MMP19-209ENST00000552872 AGXT2Q9BYV1 514 aa11.77□□□□□ -0.53
MMP19-209ENST00000552872 TRIM75PA6NK02 468 aa11.76□□□□□ -0.53
MMP19-209ENST00000552872 GOLGA8AA7E2F4 631 aa11.76□□□□□ -0.53
MMP19-209ENST00000552872 MYCNP04198 464 aaPredicted RBP11.76□□□□□ -0.53
MMP19-209ENST00000552872 SNAP25P60880 206 aa11.76□□□□□ -0.53
MMP19-209ENST00000552872 KCTD1Q719H9 257 aa11.76□□□□□ -0.53
MMP19-209ENST00000552872 CDC37L1Q7L3B6 337 aa11.76□□□□□ -0.53
MMP19-209ENST00000552872 AIFM3Q96NN9 605 aa11.76□□□□□ -0.53
MMP19-209ENST00000552872 FAM217BQ9NTX9 383 aaPredicted RBP11.76□□□□□ -0.53
MMP19-209ENST00000552872 RIOK3O14730 519 aaKnown RBP11.76□□□□□ -0.53
MMP19-209ENST00000552872 TAL1P17542 331 aaPredicted RBP11.76□□□□□ -0.53
MMP19-209ENST00000552872 SLC16A2P36021 539 aa11.76□□□□□ -0.53
MMP19-209ENST00000552872 VGLL4Q14135 290 aa11.76□□□□□ -0.53
MMP19-209ENST00000552872 TTBK2Q6IQ55 1244 aa11.76□□□□□ -0.53
MMP19-209ENST00000552872 GTF3C6Q969F1 213 aa11.76□□□□□ -0.53
MMP19-209ENST00000552872 KLRG1Q96E93 195 aa11.76□□□□□ -0.53
MMP19-209ENST00000552872 ZNF341Q9BYN7 854 aa11.76□□□□□ -0.53
MMP19-209ENST00000552872 UBA5Q9GZZ9 404 aa11.76□□□□□ -0.53
MMP19-209ENST00000552872 TTC12Q9H892 705 aaPredicted RBP11.76□□□□□ -0.53
MMP19-209ENST00000552872 ELP3Q9H9T3 547 aa11.76□□□□□ -0.53
MMP19-209ENST00000552872 VAT1LQ9HCJ6 419 aa11.76□□□□□ -0.53
MMP19-209ENST00000552872 CABP5Q9NP86 173 aa11.76□□□□□ -0.53
MMP19-209ENST00000552872 GPCPD1Q9NPB8 672 aa11.76□□□□□ -0.53
MMP19-209ENST00000552872 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.76□□□□□ -0.53
MMP19-209ENST00000552872 GREB1LQ9C091 1923 aaPredicted RBP11.76□□□□□ -0.53
MMP19-209ENST00000552872 PITPNM2Q9BZ72 1349 aa11.75□□□□□ -0.53
MMP19-209ENST00000552872 IGKV6D-41A0A0C4DH26 115 aa11.75□□□□□ -0.53
MMP19-209ENST00000552872 TROAPQ12815 778 aa11.75□□□□□ -0.53
MMP19-209ENST00000552872 ANKRD1Q15327 319 aa11.75□□□□□ -0.53
MMP19-209ENST00000552872 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.75□□□□□ -0.53
MMP19-209ENST00000552872 CATIPQ7Z7H3 387 aa11.75□□□□□ -0.53
MMP19-209ENST00000552872 COL2A1P02458 1487 aaPredicted RBP11.75□□□□□ -0.53
MMP19-209ENST00000552872 DNAH12Q6ZR08 3092 aa11.75□□□□□ -0.53
MMP19-209ENST00000552872 CELF2O95319 508 aaKnown RBP11.75□□□□□ -0.53
MMP19-209ENST00000552872 BRD1O95696 1058 aa11.75□□□□□ -0.53
MMP19-209ENST00000552872 TTLL1O95922 423 aa11.75□□□□□ -0.53
MMP19-209ENST00000552872 PCP11498 1178 aaKnown RBP11.75□□□□□ -0.53
MMP19-209ENST00000552872 LIFRP42702 1097 aa11.75□□□□□ -0.53
MMP19-209ENST00000552872 GUCY1B3Q02153 619 aa11.75□□□□□ -0.53
MMP19-209ENST00000552872 SUPT20HL1Q3ZLR7 823 aa11.75□□□□□ -0.53
MMP19-209ENST00000552872 TMEM179Q6ZVK1 233 aa11.75□□□□□ -0.53
MMP19-209ENST00000552872 SGMS1Q86VZ5 419 aa11.75□□□□□ -0.53
MMP19-209ENST00000552872 ZC3H15Q8WU90 426 aaKnown RBP11.75□□□□□ -0.53
MMP19-209ENST00000552872 ZHX2Q9Y6X8 837 aa11.75□□□□□ -0.53
MMP19-209ENST00000552872 HTTP42858 3142 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 CCDC66A2RUB6 948 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 CTIFO43310 598 aaKnown RBP11.74□□□□□ -0.53
MMP19-209ENST00000552872 PFKFB2O60825 505 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 YY1P25490 414 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 SPP2Q13103 211 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 MAPK8IP2Q13387 824 aaPredicted RBP11.74□□□□□ -0.53
MMP19-209ENST00000552872 MTMR2Q13614 643 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 SLC35G1Q2M3R5 365 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 OTUD7BQ6GQQ9 843 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 LDHDQ86WU2 507 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 FANCBQ8NB91 859 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 USP25Q9UHP3 1055 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms