RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 DDX12PQ92771 950 aa11.36□□□□□ -0.59
TMEM116-216ENST00000552800 DPF2Q92785 391 aa11.36□□□□□ -0.59
TMEM116-216ENST00000552800 PHKBQ93100 1093 aa11.36□□□□□ -0.59
TMEM116-216ENST00000552800 PGBD1Q96JS3 809 aa11.36□□□□□ -0.59
TMEM116-216ENST00000552800 USP28Q96RU2 1077 aa11.36□□□□□ -0.59
TMEM116-216ENST00000552800 MXD3Q9BW11 206 aa11.36□□□□□ -0.59
TMEM116-216ENST00000552800 RIOX1Q9H6W3 641 aa11.36□□□□□ -0.59
TMEM116-216ENST00000552800 SIPA1L1O43166 1804 aa11.36□□□□□ -0.59
TMEM116-216ENST00000552800 COL4A5P29400 1685 aa11.36□□□□□ -0.59
TMEM116-216ENST00000552800 FZD9O00144 591 aa11.35□□□□□ -0.59
TMEM116-216ENST00000552800 HLA-DOAP06340 250 aa11.35□□□□□ -0.59
TMEM116-216ENST00000552800 XBP1P17861 261 aa11.35□□□□□ -0.59
TMEM116-216ENST00000552800 MRE11P49959 708 aa11.35□□□□□ -0.59
TMEM116-216ENST00000552800 NPY5RQ15761 445 aa11.35□□□□□ -0.59
TMEM116-216ENST00000552800 PFKFB3Q16875 520 aaPredicted RBP11.35□□□□□ -0.59
TMEM116-216ENST00000552800 LRSAM1Q6UWE0 723 aa11.35□□□□□ -0.59
TMEM116-216ENST00000552800 FERMT3Q86UX7 667 aa11.35□□□□□ -0.59
TMEM116-216ENST00000552800 ENGASEQ8NFI3 743 aa11.35□□□□□ -0.59
TMEM116-216ENST00000552800 KCNG4Q8TDN1 519 aa11.35□□□□□ -0.59
TMEM116-216ENST00000552800 TNFRSF25Q93038 417 aa11.35□□□□□ -0.59
TMEM116-216ENST00000552800 PRMT6Q96LA8 375 aaPredicted RBP11.35□□□□□ -0.59
TMEM116-216ENST00000552800 SPATA32Q96LK8 384 aa11.35□□□□□ -0.59
TMEM116-216ENST00000552800 MYL10Q9BUA6 226 aa11.35□□□□□ -0.59
TMEM116-216ENST00000552800 SLC26A6Q9BXS9 759 aa11.35□□□□□ -0.59
TMEM116-216ENST00000552800 KAT14Q9H8E8 782 aa11.35□□□□□ -0.59
TMEM116-216ENST00000552800 NYAP2Q9P242 653 aa11.35□□□□□ -0.59
TMEM116-216ENST00000552800 HERC5Q9UII4 1024 aaKnown RBP11.35□□□□□ -0.59
TMEM116-216ENST00000552800 HDAC9Q9UKV0 1011 aa11.35□□□□□ -0.59
TMEM116-216ENST00000552800 CNTNAP5Q8WYK1 1306 aa11.35□□□□□ -0.59
TMEM116-216ENST00000552800 TESPA1A2RU30 521 aaPredicted RBP11.34□□□□□ -0.59
TMEM116-216ENST00000552800 GRXCR2A6NFK2 248 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 hCG_1984214I3L0E3 225 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 M0R2N6 131 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 PSMD14O00487 310 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 NMT2O60551 498 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 RXRAP19793 462 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 GUCY1A2P33402 732 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 DEKP35659 375 aaKnown RBP11.34□□□□□ -0.59
TMEM116-216ENST00000552800 TRAPPC10P48553 1259 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 SCNN1DP51172 638 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 CXCL9Q07325 125 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 NFIAQ12857 509 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 TRIM29Q14134 588 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 TNIP1Q15025 636 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 PTPAQ15257 358 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 CFAP100Q494V2 611 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 RILPL1Q5EBL4 403 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 CCDC183Q5T5S1 534 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 FAM173BQ6P4H8 233 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 SH3BP5LQ7L8J4 393 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 KIAA0825Q8IV33 1275 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 NOSTRINQ8IVI9 506 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 LARGE2Q8N3Y3 721 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 ZNF713Q8N859 430 aaPredicted RBP11.34□□□□□ -0.59
TMEM116-216ENST00000552800 DAGLBQ8NCG7 672 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 FAM151AQ8WW52 585 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 MTMR8Q96EF0 704 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 FUCA2Q9BTY2 467 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 TAOK3Q9H2K8 898 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 GDPD2Q9HCC8 539 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 TFIP11Q9UBB9 837 aaKnown RBP11.34□□□□□ -0.59
TMEM116-216ENST00000552800 NAP1L2Q9ULW6 460 aaPredicted RBP11.34□□□□□ -0.59
TMEM116-216ENST00000552800 LHX6Q9UPM6 363 aa11.34□□□□□ -0.59
TMEM116-216ENST00000552800 MYH8P13535 1937 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 GOLGA6L3A6NEY3 463 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 KIF28PB7ZC32 967 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 NFKBIEO00221 500 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 ZBTB7AO95365 584 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 TTLL1O95922 423 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 SCG2P13521 617 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 CMA1P23946 247 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 SAFBQ15424 915 aaKnown RBP eCLIP11.33□□□□□ -0.6
TMEM116-216ENST00000552800 AXDND1Q5T1B0 1012 aaPredicted RBP11.33□□□□□ -0.6
TMEM116-216ENST00000552800 ANO1Q5XXA6 986 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 CAVIN1Q6NZI2 390 aaKnown RBP11.33□□□□□ -0.6
TMEM116-216ENST00000552800 GAS2L3Q86XJ1 694 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 NIM1KQ8IY84 436 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 OGFOD1Q8N543 542 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 SLC44A5Q8NCS7 719 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 NUP133Q8WUM0 1156 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 SHISA4Q96DD7 197 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 CEP95Q96GE4 821 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 AIFM3Q96NN9 605 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 KANSL2Q9H9L4 492 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 GINM1Q9NU53 330 aa11.33□□□□□ -0.6
TMEM116-216ENST00000552800 DDX19AQ9NUU7 478 aaKnown RBP11.33□□□□□ -0.6
TMEM116-216ENST00000552800 V9GY48 417 aaPredicted RBP11.33□□□□□ -0.6
TMEM116-216ENST00000552800 ESYT2A0FGR8 921 aa11.32□□□□□ -0.6
TMEM116-216ENST00000552800 DDTLA6NHG4 134 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-216ENST00000552800 CTAGE5O15320 804 aa11.32□□□□□ -0.6
TMEM116-216ENST00000552800 FIBPO43427 364 aa11.32□□□□□ -0.6
TMEM116-216ENST00000552800 CYTH3O43739 400 aa11.32□□□□□ -0.6
TMEM116-216ENST00000552800 DTNBO60941 627 aa11.32□□□□□ -0.6
TMEM116-216ENST00000552800 PLEKHA8P1O95397 391 aa11.32□□□□□ -0.6
TMEM116-216ENST00000552800 CALML3P27482 149 aa11.32□□□□□ -0.6
TMEM116-216ENST00000552800 TOB1P50616 345 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-216ENST00000552800 AKAP17AQ02040 695 aaKnown RBP11.32□□□□□ -0.6
TMEM116-216ENST00000552800 SNW1Q13573 536 aaKnown RBP11.32□□□□□ -0.6
TMEM116-216ENST00000552800 SLC35G1Q2M3R5 365 aa11.32□□□□□ -0.6
TMEM116-216ENST00000552800 ASPRV1Q53RT3 343 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms