RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 SLC1A4P43007 532 aa12.63□□□□□ -0.39
LINC00661-206ENST00000552608 GUCY1B3Q02153 619 aa12.63□□□□□ -0.39
LINC00661-206ENST00000552608 NBR1Q14596 966 aa12.63□□□□□ -0.39
LINC00661-206ENST00000552608 USP17L2Q6R6M4 530 aa12.63□□□□□ -0.39
LINC00661-206ENST00000552608 CDAN1Q8IWY9 1227 aa12.63□□□□□ -0.39
LINC00661-206ENST00000552608 GMCL1Q96IK5 515 aa12.63□□□□□ -0.39
LINC00661-206ENST00000552608 SH3GLB2Q9NR46 395 aa12.63□□□□□ -0.39
LINC00661-206ENST00000552608 TMX2Q9Y320 296 aa12.63□□□□□ -0.39
LINC00661-206ENST00000552608 PHF20L1A8MW92 1017 aa12.62□□□□□ -0.39
LINC00661-206ENST00000552608 F5H6K3 240 aa12.62□□□□□ -0.39
LINC00661-206ENST00000552608 BMP3P12645 472 aa12.62□□□□□ -0.39
LINC00661-206ENST00000552608 CALML3P27482 149 aa12.62□□□□□ -0.39
LINC00661-206ENST00000552608 KLRC3Q07444 240 aa12.62□□□□□ -0.39
LINC00661-206ENST00000552608 RRP1BQ14684 758 aaKnown RBP12.62□□□□□ -0.39
LINC00661-206ENST00000552608 SCAND2PQ9GZW5 306 aaPredicted RBP12.62□□□□□ -0.39
LINC00661-206ENST00000552608 GPCPD1Q9NPB8 672 aa12.62□□□□□ -0.39
LINC00661-206ENST00000552608 PICK1Q9NRD5 415 aa12.62□□□□□ -0.39
LINC00661-206ENST00000552608 ZNF112Q9UJU3 913 aa12.62□□□□□ -0.39
LINC00661-206ENST00000552608 SCAF8Q9UPN6 1271 aaKnown RBP12.62□□□□□ -0.39
LINC00661-206ENST00000552608 FRMPD2Q68DX3 1309 aaPredicted RBP12.62□□□□□ -0.39
LINC00661-206ENST00000552608 PPP1R12BO60237 982 aaPredicted RBP12.61□□□□□ -0.39
LINC00661-206ENST00000552608 KRT2P35908 639 aa12.61□□□□□ -0.39
LINC00661-206ENST00000552608 USP14P54578 494 aa12.61□□□□□ -0.39
LINC00661-206ENST00000552608 NLRP5P59047 1200 aa12.61□□□□□ -0.39
LINC00661-206ENST00000552608 KIF23Q02241 960 aaPredicted RBP12.61□□□□□ -0.39
LINC00661-206ENST00000552608 TRAF1Q13077 416 aa12.61□□□□□ -0.39
LINC00661-206ENST00000552608 PKN1Q16512 942 aa12.61□□□□□ -0.39
LINC00661-206ENST00000552608 FOXD4L6Q3SYB3 417 aaPredicted RBP12.61□□□□□ -0.39
LINC00661-206ENST00000552608 EAPPQ56P03 285 aaPredicted RBP12.61□□□□□ -0.39
LINC00661-206ENST00000552608 OTUD7BQ6GQQ9 843 aa12.61□□□□□ -0.39
LINC00661-206ENST00000552608 GALNT17Q6IS24 598 aa12.61□□□□□ -0.39
LINC00661-206ENST00000552608 FOXD4L3Q6VB84 417 aaPredicted RBP12.61□□□□□ -0.39
LINC00661-206ENST00000552608 KRT26Q7Z3Y9 468 aa12.61□□□□□ -0.39
LINC00661-206ENST00000552608 SCYL3Q8IZE3 742 aa12.61□□□□□ -0.39
LINC00661-206ENST00000552608 AIFM3Q96NN9 605 aa12.61□□□□□ -0.39
LINC00661-206ENST00000552608 WRNIP1Q96S55 665 aa12.61□□□□□ -0.39
LINC00661-206ENST00000552608 FEZ1Q99689 392 aa12.61□□□□□ -0.39
LINC00661-206ENST00000552608 FOXP1Q9H334 677 aaPredicted RBP12.61□□□□□ -0.39
LINC00661-206ENST00000552608 TAF1DQ9H5J8 278 aaPredicted RBP12.61□□□□□ -0.39
LINC00661-206ENST00000552608 RIOX1Q9H6W3 641 aa12.61□□□□□ -0.39
LINC00661-206ENST00000552608 VCPKMTQ9H867 229 aa12.61□□□□□ -0.39
LINC00661-206ENST00000552608 NDUFB10O96000 172 aa12.6□□□□□ -0.39
LINC00661-206ENST00000552608 IREB2P48200 963 aaKnown RBP12.6□□□□□ -0.39
LINC00661-206ENST00000552608 JAG1P78504 1218 aa12.6□□□□□ -0.39
LINC00661-206ENST00000552608 DNM1Q05193 864 aaKnown RBP12.6□□□□□ -0.39
LINC00661-206ENST00000552608 IKQ13123 557 aaPredicted RBP12.6□□□□□ -0.39
LINC00661-206ENST00000552608 KCTD1Q719H9 257 aa12.6□□□□□ -0.39
LINC00661-206ENST00000552608 HOMER1Q86YM7 354 aa12.6□□□□□ -0.39
LINC00661-206ENST00000552608 SIAH1Q8IUQ4 282 aa12.6□□□□□ -0.39
LINC00661-206ENST00000552608 DIS3L2Q8IYB7 885 aaKnown RBP12.6□□□□□ -0.39
LINC00661-206ENST00000552608 PIBF1Q8WXW3 757 aa12.6□□□□□ -0.39
LINC00661-206ENST00000552608 ANP32EQ9BTT0 268 aa12.6□□□□□ -0.39
LINC00661-206ENST00000552608 PHF20Q9BVI0 1012 aa12.6□□□□□ -0.39
LINC00661-206ENST00000552608 VAT1LQ9HCJ6 419 aa12.6□□□□□ -0.39
LINC00661-206ENST00000552608 VPS54Q9P1Q0 977 aa12.6□□□□□ -0.39
LINC00661-206ENST00000552608 hCG_1642624A0A1W2PR95 340 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 CYTH3O43739 400 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 PRPF40AO75400 957 aaKnown RBP12.59□□□□□ -0.39
LINC00661-206ENST00000552608 U2AF2P26368 475 aaKnown RBP eCLIP12.59□□□□□ -0.39
LINC00661-206ENST00000552608 GNA11P29992 359 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 SHROOM1Q2M3G4 852 aaPredicted RBP12.59□□□□□ -0.39
LINC00661-206ENST00000552608 NOL9Q5SY16 702 aaKnown RBP12.59□□□□□ -0.39
LINC00661-206ENST00000552608 MYSM1Q5VVJ2 828 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 PPP1R18Q6NYC8 613 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 HEATR3Q7Z4Q2 680 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 FAM160B2Q86V87 743 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 ADGRF4Q8IZF3 695 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 TMEM87AQ8NBN3 555 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 CHURC1Q8WUH1 139 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 LPAR1Q92633 364 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 KLRG1Q96E93 195 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 SPATA32Q96LK8 384 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 PIGSQ96S52 555 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 UBA5Q9GZZ9 404 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 C6orf50Q9HD87 102 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 BARHL2Q9NY43 387 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 NOL7Q9UMY1 257 aaKnown RBP12.59□□□□□ -0.39
LINC00661-206ENST00000552608 KCNJ14Q9UNX9 436 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 CLEC11AQ9Y240 323 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 CNPY2Q9Y2B0 182 aa12.59□□□□□ -0.39
LINC00661-206ENST00000552608 BAZ2BQ9UIF8 2168 aaKnown RBP12.59□□□□□ -0.39
LINC00661-206ENST00000552608 PHIPQ8WWQ0 1821 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 OTOFQ9HC10 1997 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 PNMA6FA0A0J9YX94 578 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 A0A1W2PRG0 241 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 SSC5DA1L4H1 1573 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 GOLGA6L4A6NEF3 574 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 USP17L10C9JJH3 530 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 TMEM232C9JQI7 657 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 ADM5C9JUS6 153 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 ZBTB5O15062 677 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 FIBPO43427 364 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 MBD3O95983 291 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 INPP5BP32019 993 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 ECE1P42892 770 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 STAT2P52630 851 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 NAPAP54920 295 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 MAP3K9P80192 1104 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 BTNL9Q6UXG8 535 aa12.58□□□□□ -0.4
LINC00661-206ENST00000552608 NOSTRINQ8IVI9 506 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms