RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 PGK2P07205 417 aa20.43■□□□□ 0.86
CACNB3-222ENST00000552465 RLBP1P12271 317 aa20.43■□□□□ 0.86
CACNB3-222ENST00000552465 RAG1P15918 1043 aa20.43■□□□□ 0.86
CACNB3-222ENST00000552465 TAL1P17542 331 aaPredicted RBP20.43■□□□□ 0.86
CACNB3-222ENST00000552465 DIS3Q9Y2L1 958 aaKnown RBP20.43■□□□□ 0.86
CACNB3-222ENST00000552465 A0A0G2JMZ2 1700 aa20.43■□□□□ 0.86
CACNB3-222ENST00000552465 DNAH12Q6ZR08 3092 aa20.42■□□□□ 0.86
CACNB3-222ENST00000552465 A0A1W2PQ45 241 aaPredicted RBP20.42■□□□□ 0.86
CACNB3-222ENST00000552465 A0A1W2PQY0 241 aa20.42■□□□□ 0.86
CACNB3-222ENST00000552465 CCER2I3L3R5 266 aa20.42■□□□□ 0.86
CACNB3-222ENST00000552465 PQBP1O60828 265 aaKnown RBP20.42■□□□□ 0.86
CACNB3-222ENST00000552465 ZNF792Q3KQV3 632 aa20.42■□□□□ 0.86
CACNB3-222ENST00000552465 RIOX2Q8IUF8 465 aa20.42■□□□□ 0.86
CACNB3-222ENST00000552465 SYMPKQ92797 1274 aaKnown RBP20.42■□□□□ 0.86
CACNB3-222ENST00000552465 CCDC17Q96LX7 622 aa20.42■□□□□ 0.86
CACNB3-222ENST00000552465 IL1RAPL2Q9NP60 686 aa20.42■□□□□ 0.86
CACNB3-222ENST00000552465 GOLIM4O00461 696 aa20.41■□□□□ 0.86
CACNB3-222ENST00000552465 ZNF865P0CJ78 1059 aaPredicted RBP20.41■□□□□ 0.86
CACNB3-222ENST00000552465 FPGSQ05932 587 aa20.41■□□□□ 0.86
CACNB3-222ENST00000552465 KCTD2Q14681 263 aa20.41■□□□□ 0.86
CACNB3-222ENST00000552465 ARMT1Q9H993 441 aa20.41■□□□□ 0.86
CACNB3-222ENST00000552465 TMEM39AQ9NV64 488 aa20.41■□□□□ 0.86
CACNB3-222ENST00000552465 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.4■□□□□ 0.86
CACNB3-222ENST00000552465 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.4■□□□□ 0.86
CACNB3-222ENST00000552465 PRKAB2O43741 272 aa20.4■□□□□ 0.86
CACNB3-222ENST00000552465 AKR1A1P14550 325 aa20.4■□□□□ 0.86
CACNB3-222ENST00000552465 STAT3P40763 770 aa20.4■□□□□ 0.86
CACNB3-222ENST00000552465 FAAP100Q0VG06 881 aa20.4■□□□□ 0.86
CACNB3-222ENST00000552465 GRIN2CQ14957 1233 aa20.4■□□□□ 0.86
CACNB3-222ENST00000552465 ANKRD33Q7Z3H0 272 aa20.4■□□□□ 0.86
CACNB3-222ENST00000552465 RHPN1Q8TCX5 695 aa20.4■□□□□ 0.86
CACNB3-222ENST00000552465 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.4■□□□□ 0.86
CACNB3-222ENST00000552465 TOX2Q96NM4 488 aa20.4■□□□□ 0.86
CACNB3-222ENST00000552465 DNAJC2Q99543 621 aaKnown RBP20.4■□□□□ 0.86
CACNB3-222ENST00000552465 TSEN34Q9BSV6 310 aaKnown RBP20.4■□□□□ 0.86
CACNB3-222ENST00000552465 FBXO28Q9NVF7 368 aa20.4■□□□□ 0.86
CACNB3-222ENST00000552465 ROBO3Q96MS0 1386 aa20.39■□□□□ 0.85
CACNB3-222ENST00000552465 SMIM22K7EJ46 135 aa20.39■□□□□ 0.85
CACNB3-222ENST00000552465 VWA5AO00534 786 aa20.39■□□□□ 0.85
CACNB3-222ENST00000552465 ADAMTS4O75173 837 aa20.39■□□□□ 0.85
CACNB3-222ENST00000552465 EEF2P13639 858 aaKnown RBP20.39■□□□□ 0.85
CACNB3-222ENST00000552465 CDK8P49336 464 aa20.39■□□□□ 0.85
CACNB3-222ENST00000552465 HSP90AB4PQ58FF6 505 aa20.39■□□□□ 0.85
CACNB3-222ENST00000552465 ATP8A2Q9NTI2 1148 aa20.39■□□□□ 0.85
CACNB3-222ENST00000552465 NAV1Q8NEY1 1877 aa20.39■□□□□ 0.85
CACNB3-222ENST00000552465 DCDC2CA8MYV0 355 aa20.38■□□□□ 0.85
CACNB3-222ENST00000552465 C12orf60Q5U649 245 aa20.38■□□□□ 0.85
CACNB3-222ENST00000552465 LENG1Q96BZ8 264 aaPredicted RBP20.38■□□□□ 0.85
CACNB3-222ENST00000552465 KANSL2Q9H9L4 492 aa20.38■□□□□ 0.85
CACNB3-222ENST00000552465 ZNF214Q9UL59 606 aaPredicted RBP20.38■□□□□ 0.85
CACNB3-222ENST00000552465 PPP1R9AQ9ULJ8 1098 aa20.38■□□□□ 0.85
CACNB3-222ENST00000552465 CNPY2Q9Y2B0 182 aa20.38■□□□□ 0.85
CACNB3-222ENST00000552465 CYP2D7A0A087X1C5 515 aa20.37■□□□□ 0.85
CACNB3-222ENST00000552465 DNAJB2P25686 324 aa20.37■□□□□ 0.85
CACNB3-222ENST00000552465 COPB2P35606 906 aa20.37■□□□□ 0.85
CACNB3-222ENST00000552465 ACLYP53396 1101 aa20.37■□□□□ 0.85
CACNB3-222ENST00000552465 SLFNL1Q499Z3 407 aa20.37■□□□□ 0.85
CACNB3-222ENST00000552465 CLASRPQ8N2M8 674 aaKnown RBP20.37■□□□□ 0.85
CACNB3-222ENST00000552465 REPS2Q8NFH8 660 aa20.37■□□□□ 0.85
CACNB3-222ENST00000552465 NUP133Q8WUM0 1156 aa20.37■□□□□ 0.85
CACNB3-222ENST00000552465 STARD7Q9NQZ5 370 aa20.37■□□□□ 0.85
CACNB3-222ENST00000552465 LAMA2P24043 3122 aaKnown RBP20.36■□□□□ 0.85
CACNB3-222ENST00000552465 USP17L12C9JPN9 530 aa20.36■□□□□ 0.85
CACNB3-222ENST00000552465 USP17L21D6R901 530 aa20.36■□□□□ 0.85
CACNB3-222ENST00000552465 MBD4O95243 580 aa20.36■□□□□ 0.85
CACNB3-222ENST00000552465 C16orf86Q6ZW13 317 aa20.36■□□□□ 0.85
CACNB3-222ENST00000552465 MSL3Q8N5Y2 521 aaKnown RBP20.36■□□□□ 0.85
CACNB3-222ENST00000552465 USP38Q8NB14 1042 aa20.36■□□□□ 0.85
CACNB3-222ENST00000552465 KLHDC9Q8NEP7 349 aa20.36■□□□□ 0.85
CACNB3-222ENST00000552465 ZNF576Q9H609 170 aa20.36■□□□□ 0.85
CACNB3-222ENST00000552465 GOPCQ9HD26 462 aa20.36■□□□□ 0.85
CACNB3-222ENST00000552465 TIMP1P01033 207 aa20.35■□□□□ 0.85
CACNB3-222ENST00000552465 IFIT2P09913 472 aaKnown RBP20.35■□□□□ 0.85
CACNB3-222ENST00000552465 ADD2P35612 726 aa20.35■□□□□ 0.85
CACNB3-222ENST00000552465 KCNA10Q16322 511 aa20.35■□□□□ 0.85
CACNB3-222ENST00000552465 TJAP1Q5JTD0 557 aa20.35■□□□□ 0.85
CACNB3-222ENST00000552465 FAM83BQ5T0W9 1011 aa20.35■□□□□ 0.85
CACNB3-222ENST00000552465 CCSAPQ6IQ19 270 aaPredicted RBP20.35■□□□□ 0.85
CACNB3-222ENST00000552465 AMOTL1Q8IY63 956 aa20.35■□□□□ 0.85
CACNB3-222ENST00000552465 FAM184BQ9ULE4 1060 aa20.35■□□□□ 0.85
CACNB3-222ENST00000552465 SMCHD1A6NHR9 2005 aa20.35■□□□□ 0.85
CACNB3-222ENST00000552465 SYNRGQ9UMZ2 1314 aa20.34■□□□□ 0.85
CACNB3-222ENST00000552465 MOXD2PA6NHM9 499 aa20.34■□□□□ 0.85
CACNB3-222ENST00000552465 SNAI1O95863 264 aaPredicted RBP20.34■□□□□ 0.85
CACNB3-222ENST00000552465 TIFAQ96CG3 184 aa20.34■□□□□ 0.85
CACNB3-222ENST00000552465 KIF1BPQ96EK5 621 aa20.34■□□□□ 0.85
CACNB3-222ENST00000552465 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.34■□□□□ 0.85
CACNB3-222ENST00000552465 PAG1Q9NWQ8 432 aa20.34■□□□□ 0.85
CACNB3-222ENST00000552465 TBX21Q9UL17 535 aa20.34■□□□□ 0.85
CACNB3-222ENST00000552465 SYNGAP1Q96PV0 1343 aa20.33■□□□□ 0.85
CACNB3-222ENST00000552465 APBB1O00213 710 aa20.33■□□□□ 0.85
CACNB3-222ENST00000552465 RAD21O60216 631 aa20.33■□□□□ 0.85
CACNB3-222ENST00000552465 MFSD5Q6N075 450 aa20.33■□□□□ 0.85
CACNB3-222ENST00000552465 MAMDC4Q6UXC1 1216 aa20.33■□□□□ 0.85
CACNB3-222ENST00000552465 C16orf59Q7L2K0 433 aa20.33■□□□□ 0.85
CACNB3-222ENST00000552465 ZNFX1Q9P2E3 1918 aaKnown RBP20.32■□□□□ 0.84
CACNB3-222ENST00000552465 DUSP11O75319 330 aaKnown RBP20.32■□□□□ 0.84
CACNB3-222ENST00000552465 CDK7P50613 346 aa20.32■□□□□ 0.84
CACNB3-222ENST00000552465 DDX11Q96FC9 970 aa20.32■□□□□ 0.84
CACNB3-222ENST00000552465 DDRGK1Q96HY6 314 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms