RNA–Protein interactions for RNA: ENST00000552442.1

UBE2N-206, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 5 BASIC

Gene UBE2N, Length 607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-206ENST00000552442 SHROOM1Q2M3G4 852 aaPredicted RBP10.89□□□□□ -0.67
UBE2N-206ENST00000552442 ANKRD45Q5TZF3 282 aa10.89□□□□□ -0.67
UBE2N-206ENST00000552442 C17orf99Q6UX52 265 aa10.89□□□□□ -0.67
UBE2N-206ENST00000552442 SCUBE3Q8IX30 993 aa10.89□□□□□ -0.67
UBE2N-206ENST00000552442 KBTBD3Q8NAB2 608 aa10.89□□□□□ -0.67
UBE2N-206ENST00000552442 PROCA1Q8NCQ7 364 aaPredicted RBP10.89□□□□□ -0.67
UBE2N-206ENST00000552442 OTUD7AQ8TE49 926 aaPredicted RBP10.89□□□□□ -0.67
UBE2N-206ENST00000552442 HLA-CQ95604 372 aa10.89□□□□□ -0.67
UBE2N-206ENST00000552442 GCC1Q96CN9 775 aa10.89□□□□□ -0.67
UBE2N-206ENST00000552442 WDR18Q9BV38 432 aa10.89□□□□□ -0.67
UBE2N-206ENST00000552442 DCP1AQ9NPI6 582 aaPredicted RBP10.89□□□□□ -0.67
UBE2N-206ENST00000552442 AGTPBP1Q9UPW5 1226 aa10.89□□□□□ -0.67
UBE2N-206ENST00000552442 PTPN22Q9Y2R2 807 aa10.89□□□□□ -0.67
UBE2N-206ENST00000552442 SLC45A1Q9Y2W3 748 aa10.89□□□□□ -0.67
UBE2N-206ENST00000552442 MYH4Q9Y623 1939 aa10.89□□□□□ -0.67
UBE2N-206ENST00000552442 PRKAB2O43741 272 aa10.88□□□□□ -0.67
UBE2N-206ENST00000552442 GLRX3O76003 335 aaKnown RBP10.88□□□□□ -0.67
UBE2N-206ENST00000552442 GH2P01242 217 aa10.88□□□□□ -0.67
UBE2N-206ENST00000552442 MX1P20591 662 aa10.88□□□□□ -0.67
UBE2N-206ENST00000552442 CLK2P49760 499 aaKnown RBP10.88□□□□□ -0.67
UBE2N-206ENST00000552442 PLCD1P51178 756 aa10.88□□□□□ -0.67
UBE2N-206ENST00000552442 LACTBP83111 547 aaPredicted RBP10.88□□□□□ -0.67
UBE2N-206ENST00000552442 GUCA2AQ02747 115 aa10.88□□□□□ -0.67
UBE2N-206ENST00000552442 MTMR2Q13614 643 aa10.88□□□□□ -0.67
UBE2N-206ENST00000552442 SH3D19Q5HYK7 790 aa10.88□□□□□ -0.67
UBE2N-206ENST00000552442 TREML2Q5T2D2 321 aa10.88□□□□□ -0.67
UBE2N-206ENST00000552442 TATDN1Q6P1N9 297 aa10.88□□□□□ -0.67
UBE2N-206ENST00000552442 IL27Q8NEV9 243 aa10.88□□□□□ -0.67
UBE2N-206ENST00000552442 ZNF516Q92618 1163 aa10.88□□□□□ -0.67
UBE2N-206ENST00000552442 ARHGAP39Q9C0H5 1083 aa10.88□□□□□ -0.67
UBE2N-206ENST00000552442 ATP8A2Q9NTI2 1148 aa10.88□□□□□ -0.67
UBE2N-206ENST00000552442 PARP14Q460N5 1801 aa10.87□□□□□ -0.67
UBE2N-206ENST00000552442 TLL1O43897 1013 aa10.87□□□□□ -0.67
UBE2N-206ENST00000552442 FMNL1O95466 1100 aaPredicted RBP10.87□□□□□ -0.67
UBE2N-206ENST00000552442 ZFYP08048 801 aaPredicted RBP10.87□□□□□ -0.67
UBE2N-206ENST00000552442 CYP2D6P10635 497 aa10.87□□□□□ -0.67
UBE2N-206ENST00000552442 BCRP11274 1271 aa10.87□□□□□ -0.67
UBE2N-206ENST00000552442 NDUFV2P19404 249 aa10.87□□□□□ -0.67
UBE2N-206ENST00000552442 SHMT1P34896 483 aa10.87□□□□□ -0.67
UBE2N-206ENST00000552442 SOX10P56693 466 aa10.87□□□□□ -0.67
UBE2N-206ENST00000552442 BACE1P56817 501 aa10.87□□□□□ -0.67
UBE2N-206ENST00000552442 PABPC4Q13310 644 aaKnown RBP eCLIP10.87□□□□□ -0.675e-7■□□□□ 8.7
UBE2N-206ENST00000552442 ABCB5Q2M3G0 1257 aa10.87□□□□□ -0.67
UBE2N-206ENST00000552442 LRRFIP1Q32MZ4 808 aaKnown RBP10.87□□□□□ -0.67
UBE2N-206ENST00000552442 CERKLQ49MI3 558 aaPredicted RBP10.87□□□□□ -0.67
UBE2N-206ENST00000552442 AMOTL1Q8IY63 956 aa10.87□□□□□ -0.67
UBE2N-206ENST00000552442 EXOC6Q8TAG9 804 aa10.87□□□□□ -0.67
UBE2N-206ENST00000552442 PI4K2BQ8TCG2 481 aa10.87□□□□□ -0.67
UBE2N-206ENST00000552442 SMCR8Q8TEV9 937 aaPredicted RBP10.87□□□□□ -0.67
UBE2N-206ENST00000552442 APPBP2Q92624 585 aa10.87□□□□□ -0.67
UBE2N-206ENST00000552442 PUS7LQ9H0K6 701 aaKnown RBP10.87□□□□□ -0.67
UBE2N-206ENST00000552442 TMOD4Q9NZQ9 345 aa10.87□□□□□ -0.67
UBE2N-206ENST00000552442 SUPT16HQ9Y5B9 1047 aaKnown RBP10.87□□□□□ -0.67
UBE2N-206ENST00000552442 SLC4A4Q9Y6R1 1079 aa10.87□□□□□ -0.67
UBE2N-206ENST00000552442 GREB1LQ9C091 1923 aaPredicted RBP10.87□□□□□ -0.67
UBE2N-206ENST00000552442 CENPFP49454 3210 aa10.86□□□□□ -0.67
UBE2N-206ENST00000552442 SALL3Q9BXA9 1300 aa10.86□□□□□ -0.67
UBE2N-206ENST00000552442 C19orf81C9J6K1 198 aa10.86□□□□□ -0.67
UBE2N-206ENST00000552442 USP17L10C9JJH3 530 aa10.86□□□□□ -0.67
UBE2N-206ENST00000552442 SPTLC1O15269 473 aa10.86□□□□□ -0.67
UBE2N-206ENST00000552442 RNF113AO15541 343 aaKnown RBP10.86□□□□□ -0.67
UBE2N-206ENST00000552442 GNRH1P01148 92 aa10.86□□□□□ -0.67
UBE2N-206ENST00000552442 PSMC4P43686 418 aa10.86□□□□□ -0.67
UBE2N-206ENST00000552442 GABPAQ06546 454 aa10.86□□□□□ -0.67
UBE2N-206ENST00000552442 RAB3GAP1Q15042 981 aa10.86□□□□□ -0.67
UBE2N-206ENST00000552442 FEZ1Q99689 392 aa10.86□□□□□ -0.67
UBE2N-206ENST00000552442 FSD1Q9BTV5 496 aa10.86□□□□□ -0.67
UBE2N-206ENST00000552442 RWDD1Q9H446 243 aaPredicted RBP10.86□□□□□ -0.67
UBE2N-206ENST00000552442 CABP5Q9NP86 173 aa10.86□□□□□ -0.67
UBE2N-206ENST00000552442 ADH1BP00325 375 aa10.85□□□□□ -0.67
UBE2N-206ENST00000552442 RGS19P49795 217 aa10.85□□□□□ -0.67
UBE2N-206ENST00000552442 PRMT2P55345 433 aa10.85□□□□□ -0.67
UBE2N-206ENST00000552442 USP17L2Q6R6M4 530 aa10.85□□□□□ -0.67
UBE2N-206ENST00000552442 SLC44A5Q8NCS7 719 aa10.85□□□□□ -0.67
UBE2N-206ENST00000552442 OSBP2Q969R2 916 aa10.85□□□□□ -0.67
UBE2N-206ENST00000552442 TRIM47Q96LD4 638 aa10.85□□□□□ -0.67
UBE2N-206ENST00000552442 STRBPQ96SI9 672 aaKnown RBP10.85□□□□□ -0.67
UBE2N-206ENST00000552442 SWAP70Q9UH65 585 aa10.85□□□□□ -0.67
UBE2N-206ENST00000552442 PTCH2Q9Y6C5 1203 aa10.85□□□□□ -0.67
UBE2N-206ENST00000552442 PLXNB2O15031 1838 aa10.85□□□□□ -0.67
UBE2N-206ENST00000552442 COL11A1P12107 1806 aaPredicted RBP10.84□□□□□ -0.67
UBE2N-206ENST00000552442 RLFQ13129 1914 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 CYP2D7A0A087X1C5 515 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 USP17L12C9JPN9 530 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 USP17L21D6R901 530 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 MPHOSPH10O00566 681 aaKnown RBP10.84□□□□□ -0.67
UBE2N-206ENST00000552442 GPAA1O43292 621 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 HOXD10P28358 340 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 CTGFP29279 349 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 GCLCP48506 637 aaPredicted RBP10.84□□□□□ -0.67
UBE2N-206ENST00000552442 FCGRTP55899 365 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 IRX3P78415 501 aaPredicted RBP10.84□□□□□ -0.67
UBE2N-206ENST00000552442 SKIV2LQ15477 1246 aaKnown RBP10.84□□□□□ -0.67
UBE2N-206ENST00000552442 ZYXQ15942 572 aaKnown RBP10.84□□□□□ -0.67
UBE2N-206ENST00000552442 SLC9C1Q4G0N8 1177 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 C12orf60Q5U649 245 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 SMC5Q8IY18 1101 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 ANKRD13CQ8N6S4 541 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 ARMC5Q96C12 935 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 DYNLL2Q96FJ2 89 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms