RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 SHCBP1Q8NEM2 672 aa16.68■□□□□ 0.26
DDX54-210ENST00000552375 NAPBQ9H115 298 aa16.68■□□□□ 0.26
DDX54-210ENST00000552375 RANBP2P49792 3224 aaKnown RBP16.68■□□□□ 0.26
DDX54-210ENST00000552375 IGKV6D-41A0A0C4DH26 115 aa16.67■□□□□ 0.26
DDX54-210ENST00000552375 FOXP2O15409 715 aa16.67■□□□□ 0.26
DDX54-210ENST00000552375 PRDM1O75626 825 aa16.67■□□□□ 0.26
DDX54-210ENST00000552375 ANKLE1Q8NAG6 615 aa16.67■□□□□ 0.26
DDX54-210ENST00000552375 NYAP2Q9P242 653 aa16.67■□□□□ 0.26
DDX54-210ENST00000552375 COL11A1P12107 1806 aaPredicted RBP16.66■□□□□ 0.26
DDX54-210ENST00000552375 ZNF236Q9UL36 1845 aa16.66■□□□□ 0.26
DDX54-210ENST00000552375 ERCC3P19447 782 aa16.66■□□□□ 0.26
DDX54-210ENST00000552375 SDSP20132 328 aa16.66■□□□□ 0.26
DDX54-210ENST00000552375 PPARAQ07869 468 aa16.66■□□□□ 0.26
DDX54-210ENST00000552375 CACNB2Q08289 660 aaPredicted RBP16.66■□□□□ 0.26
DDX54-210ENST00000552375 FAM83BQ5T0W9 1011 aa16.66■□□□□ 0.26
DDX54-210ENST00000552375 HELLSQ9NRZ9 838 aa16.66■□□□□ 0.26
DDX54-210ENST00000552375 DIAPH3Q9NSV4 1193 aa16.66■□□□□ 0.26
DDX54-210ENST00000552375 FBXO28Q9NVF7 368 aa16.66■□□□□ 0.26
DDX54-210ENST00000552375 PPP1R9AQ9ULJ8 1098 aa16.66■□□□□ 0.26
DDX54-210ENST00000552375 RLFQ13129 1914 aa16.65■□□□□ 0.26
DDX54-210ENST00000552375 H0YGN5 161 aa16.65■□□□□ 0.26
DDX54-210ENST00000552375 RAD21O60216 631 aa16.65■□□□□ 0.26
DDX54-210ENST00000552375 NDUFB10O96000 172 aa16.65■□□□□ 0.26
DDX54-210ENST00000552375 SLC3A2P08195 630 aaKnown RBP16.65■□□□□ 0.26
DDX54-210ENST00000552375 ADORA2AP29274 412 aa16.65■□□□□ 0.26
DDX54-210ENST00000552375 PDE4BQ07343 736 aa16.65■□□□□ 0.26
DDX54-210ENST00000552375 MFSD14CQ5VZR4 134 aa16.65■□□□□ 0.26
DDX54-210ENST00000552375 SAMD1Q6SPF0 538 aaPredicted RBP16.65■□□□□ 0.26
DDX54-210ENST00000552375 CWC27Q6UX04 472 aaKnown RBP16.65■□□□□ 0.26
DDX54-210ENST00000552375 CENPQQ7L2Z9 268 aaPredicted RBP16.65■□□□□ 0.26
DDX54-210ENST00000552375 DIS3LQ8TF46 1054 aaKnown RBP16.65■□□□□ 0.26
DDX54-210ENST00000552375 DPF3Q92784 378 aa16.65■□□□□ 0.26
DDX54-210ENST00000552375 CEP95Q96GE4 821 aa16.65■□□□□ 0.26
DDX54-210ENST00000552375 CCDC136Q96JN2 1154 aa16.65■□□□□ 0.26
DDX54-210ENST00000552375 MROH8Q9H579 483 aa16.65■□□□□ 0.26
DDX54-210ENST00000552375 FLRT1Q9NZU1 646 aa16.65■□□□□ 0.26
DDX54-210ENST00000552375 OGDHLQ9ULD0 1010 aa16.65■□□□□ 0.26
DDX54-210ENST00000552375 SYNPO2Q9UMS6 1093 aa16.65■□□□□ 0.26
DDX54-210ENST00000552375 ADAMTS5Q9UNA0 930 aa16.65■□□□□ 0.26
DDX54-210ENST00000552375 CCDC171Q6TFL3 1326 aa16.65■□□□□ 0.26
DDX54-210ENST00000552375 STRNO43815 780 aa16.64■□□□□ 0.25
DDX54-210ENST00000552375 CCND3P30281 292 aaPredicted RBP16.64■□□□□ 0.25
DDX54-210ENST00000552375 PLS1Q14651 629 aa16.64■□□□□ 0.25
DDX54-210ENST00000552375 TMEM132BQ14DG7 1078 aa16.64■□□□□ 0.25
DDX54-210ENST00000552375 MCMDC2Q4G0Z9 681 aa16.64■□□□□ 0.25
DDX54-210ENST00000552375 NECAB2Q7Z6G3 386 aa16.64■□□□□ 0.25
DDX54-210ENST00000552375 TICAM2Q86XR7 235 aa16.64■□□□□ 0.25
DDX54-210ENST00000552375 ZNF444Q8N0Y2 327 aaPredicted RBP16.64■□□□□ 0.25
DDX54-210ENST00000552375 PAWRQ96IZ0 340 aaKnown RBP16.64■□□□□ 0.25
DDX54-210ENST00000552375 TRIOBPQ9H2D6 2365 aa16.63■□□□□ 0.25
DDX54-210ENST00000552375 F5H6K3 240 aa16.63■□□□□ 0.25
DDX54-210ENST00000552375 VWA5AO00534 786 aa16.63■□□□□ 0.25
DDX54-210ENST00000552375 SLC25A27O95847 323 aa16.63■□□□□ 0.25
DDX54-210ENST00000552375 CTDSPL2Q05D32 466 aa16.63■□□□□ 0.25
DDX54-210ENST00000552375 KLRC3Q07444 240 aa16.63■□□□□ 0.25
DDX54-210ENST00000552375 NCAPG2Q86XI2 1143 aa16.63■□□□□ 0.25
DDX54-210ENST00000552375 ABRAQ8N0Z2 381 aa16.63■□□□□ 0.25
DDX54-210ENST00000552375 NEDD1Q8NHV4 660 aa16.63■□□□□ 0.25
DDX54-210ENST00000552375 NPLOC4Q8TAT6 608 aa16.63■□□□□ 0.25
DDX54-210ENST00000552375 NUP88Q99567 741 aaPredicted RBP16.63■□□□□ 0.25
DDX54-210ENST00000552375 MTMR4Q9NYA4 1195 aa16.63■□□□□ 0.25
DDX54-210ENST00000552375 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.63■□□□□ 0.25
DDX54-210ENST00000552375 TTLL1O95922 423 aa16.62■□□□□ 0.25
DDX54-210ENST00000552375 IGHA2P01877 340 aa16.62■□□□□ 0.25
DDX54-210ENST00000552375 TSPY3P0CV98 308 aa16.62■□□□□ 0.25
DDX54-210ENST00000552375 TSPY8P0CW00 308 aa16.62■□□□□ 0.25
DDX54-210ENST00000552375 COPB2P35606 906 aa16.62■□□□□ 0.25
DDX54-210ENST00000552375 MNX1P50219 401 aaPredicted RBP16.62■□□□□ 0.25
DDX54-210ENST00000552375 HABP4Q5JVS0 413 aaKnown RBP16.62■□□□□ 0.25
DDX54-210ENST00000552375 OLFML2BQ68BL8 750 aa16.62■□□□□ 0.25
DDX54-210ENST00000552375 DPP9Q86TI2 863 aa16.62■□□□□ 0.25
DDX54-210ENST00000552375 LRRC47Q8N1G4 583 aaKnown RBP16.62■□□□□ 0.25
DDX54-210ENST00000552375 GMCL1P1Q8NEA9 526 aa16.62■□□□□ 0.25
DDX54-210ENST00000552375 REPS2Q8NFH8 660 aa16.62■□□□□ 0.25
DDX54-210ENST00000552375 SLF1Q9BQI6 1058 aa16.62■□□□□ 0.25
DDX54-210ENST00000552375 NBPF3Q9H094 633 aa16.62■□□□□ 0.25
DDX54-210ENST00000552375 CLIP2Q9UDT6 1046 aa16.62■□□□□ 0.25
DDX54-210ENST00000552375 ZNF214Q9UL59 606 aaPredicted RBP16.62■□□□□ 0.25
DDX54-210ENST00000552375 NR2E3Q9Y5X4 410 aa16.62■□□□□ 0.25
DDX54-210ENST00000552375 CYP2C19P33261 490 aa16.61■□□□□ 0.25
DDX54-210ENST00000552375 LHX8Q68G74 356 aa16.61■□□□□ 0.25
DDX54-210ENST00000552375 RIOX2Q8IUF8 465 aa16.61■□□□□ 0.25
DDX54-210ENST00000552375 MKL1Q969V6 931 aa16.61■□□□□ 0.25
DDX54-210ENST00000552375 IL25Q9H293 177 aa16.61■□□□□ 0.25
DDX54-210ENST00000552375 SLC5A4Q9NY91 659 aa16.61■□□□□ 0.25
DDX54-210ENST00000552375 EVI5O60447 810 aa16.6■□□□□ 0.25
DDX54-210ENST00000552375 MSCO60682 206 aa16.6■□□□□ 0.25
DDX54-210ENST00000552375 COBLO75128 1261 aa16.6■□□□□ 0.25
DDX54-210ENST00000552375 HSPD1P10809 573 aaKnown RBP16.6■□□□□ 0.25
DDX54-210ENST00000552375 FCER1AP12319 257 aa16.6■□□□□ 0.25
DDX54-210ENST00000552375 CYBAP13498 195 aa16.6■□□□□ 0.25
DDX54-210ENST00000552375 STAT3P40763 770 aa16.6■□□□□ 0.25
DDX54-210ENST00000552375 HAND2P61296 217 aa16.6■□□□□ 0.25
DDX54-210ENST00000552375 TFAP4Q01664 338 aa16.6■□□□□ 0.25
DDX54-210ENST00000552375 ALX1Q15699 326 aa16.6■□□□□ 0.25
DDX54-210ENST00000552375 FAM47AQ5JRC9 791 aa16.6■□□□□ 0.25
DDX54-210ENST00000552375 PPP4R3BQ5MIZ7 849 aa16.6■□□□□ 0.25
DDX54-210ENST00000552375 TEX13BQ9BXU2 312 aa16.6■□□□□ 0.25
DDX54-210ENST00000552375 C11orf49Q9H6J7 331 aa16.6■□□□□ 0.25
DDX54-210ENST00000552375 INCENPQ9NQS7 918 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms