RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 TECTAO75443 2155 aa12.69□□□□□ -0.38
SLC48A1-209ENST00000552003 PDS5AQ29RF7 1337 aaKnown RBP12.68□□□□□ -0.38
SLC48A1-209ENST00000552003 CACNA1GO43497 2377 aa12.68□□□□□ -0.38
SLC48A1-209ENST00000552003 POTEB3A0JP26 581 aa12.68□□□□□ -0.38
SLC48A1-209ENST00000552003 APBB1O00213 710 aa12.68□□□□□ -0.38
SLC48A1-209ENST00000552003 ADCY6O43306 1168 aa12.68□□□□□ -0.38
SLC48A1-209ENST00000552003 CD4P01730 458 aa12.68□□□□□ -0.38
SLC48A1-209ENST00000552003 CA3P07451 260 aa12.68□□□□□ -0.38
SLC48A1-209ENST00000552003 TIMM10P62072 90 aa12.68□□□□□ -0.38
SLC48A1-209ENST00000552003 POTEBQ6S5H4 581 aa12.68□□□□□ -0.38
SLC48A1-209ENST00000552003 ERICH6Q7L0X2 663 aa12.68□□□□□ -0.38
SLC48A1-209ENST00000552003 MAPKAPK5Q8IW41 473 aa12.68□□□□□ -0.38
SLC48A1-209ENST00000552003 USP44Q9H0E7 712 aa12.68□□□□□ -0.38
SLC48A1-209ENST00000552003 KCNH6Q9H252 994 aa12.68□□□□□ -0.38
SLC48A1-209ENST00000552003 GINM1Q9NU53 330 aa12.68□□□□□ -0.38
SLC48A1-209ENST00000552003 RIF1Q5UIP0 2472 aaKnown RBP12.68□□□□□ -0.38
SLC48A1-209ENST00000552003 COL4A4P53420 1690 aaPredicted RBP12.67□□□□□ -0.38
SLC48A1-209ENST00000552003 ST18O60284 1047 aa12.67□□□□□ -0.38
SLC48A1-209ENST00000552003 PGK2P07205 417 aa12.67□□□□□ -0.38
SLC48A1-209ENST00000552003 IL9P15248 144 aa12.67□□□□□ -0.38
SLC48A1-209ENST00000552003 GRB10Q13322 594 aa12.67□□□□□ -0.38
SLC48A1-209ENST00000552003 KIAA1755Q5JYT7 1200 aa12.67□□□□□ -0.38
SLC48A1-209ENST00000552003 HFE2Q6ZVN8 426 aa12.67□□□□□ -0.38
SLC48A1-209ENST00000552003 FOXP4Q8IVH2 680 aaPredicted RBP12.67□□□□□ -0.38
SLC48A1-209ENST00000552003 SHCBP1Q8NEM2 672 aa12.67□□□□□ -0.38
SLC48A1-209ENST00000552003 PRSS33Q8NF86 280 aa12.67□□□□□ -0.38
SLC48A1-209ENST00000552003 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.67□□□□□ -0.38
SLC48A1-209ENST00000552003 KIAA1683Q9H0B3 1180 aa12.67□□□□□ -0.38
SLC48A1-209ENST00000552003 WNT8AQ9H1J5 351 aa12.67□□□□□ -0.38
SLC48A1-209ENST00000552003 DHX36Q9H2U1 1008 aaKnown RBP12.67□□□□□ -0.38
SLC48A1-209ENST00000552003 FLT1P17948 1338 aa12.66□□□□□ -0.38
SLC48A1-209ENST00000552003 MOXD2PA6NHM9 499 aa12.66□□□□□ -0.38
SLC48A1-209ENST00000552003 ARVCFO00192 962 aa12.66□□□□□ -0.38
SLC48A1-209ENST00000552003 GTPBP6O43824 516 aaPredicted RBP12.66□□□□□ -0.38
SLC48A1-209ENST00000552003 MAP4K4O95819 1239 aaPredicted RBP12.66□□□□□ -0.38
SLC48A1-209ENST00000552003 GUCY1A2P33402 732 aa12.66□□□□□ -0.38
SLC48A1-209ENST00000552003 CCL23P55773 120 aa12.66□□□□□ -0.38
SLC48A1-209ENST00000552003 CCDC27Q2M243 656 aa12.66□□□□□ -0.38
SLC48A1-209ENST00000552003 SPTY2D1Q68D10 685 aaPredicted RBP12.66□□□□□ -0.38
SLC48A1-209ENST00000552003 ADGRA1Q86SQ6 560 aa12.66□□□□□ -0.38
SLC48A1-209ENST00000552003 TGFBRAP1Q8WUH2 860 aa12.66□□□□□ -0.38
SLC48A1-209ENST00000552003 NUP133Q8WUM0 1156 aa12.66□□□□□ -0.38
SLC48A1-209ENST00000552003 TINF2Q9BSI4 451 aa12.66□□□□□ -0.38
SLC48A1-209ENST00000552003 HMG20BQ9P0W2 317 aa12.66□□□□□ -0.38
SLC48A1-209ENST00000552003 CEP126Q9P2H0 1117 aa12.66□□□□□ -0.38
SLC48A1-209ENST00000552003 NRBP1Q9UHY1 535 aa12.66□□□□□ -0.38
SLC48A1-209ENST00000552003 SCN5AQ14524 2016 aa12.66□□□□□ -0.38
SLC48A1-209ENST00000552003 ELP1O95163 1332 aa12.65□□□□□ -0.38
SLC48A1-209ENST00000552003 IL16Q14005 1332 aa12.65□□□□□ -0.38
SLC48A1-209ENST00000552003 PARP14Q460N5 1801 aa12.65□□□□□ -0.38
SLC48A1-209ENST00000552003 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.65□□□□□ -0.38
SLC48A1-209ENST00000552003 A0A1W2PRG0 241 aa12.65□□□□□ -0.38
SLC48A1-209ENST00000552003 ASGR1P07306 291 aa12.65□□□□□ -0.38
SLC48A1-209ENST00000552003 AKR1A1P14550 325 aa12.65□□□□□ -0.38
SLC48A1-209ENST00000552003 TAP1Q03518 808 aa12.65□□□□□ -0.38
SLC48A1-209ENST00000552003 TTLL4Q14679 1199 aa12.65□□□□□ -0.38
SLC48A1-209ENST00000552003 ZNF792Q3KQV3 632 aa12.65□□□□□ -0.38
SLC48A1-209ENST00000552003 IER5LQ5T953 404 aa12.65□□□□□ -0.38
SLC48A1-209ENST00000552003 ABRAQ8N0Z2 381 aa12.65□□□□□ -0.38
SLC48A1-209ENST00000552003 ARNTL2Q8WYA1 636 aa12.65□□□□□ -0.38
SLC48A1-209ENST00000552003 FEZ1Q99689 392 aa12.65□□□□□ -0.38
SLC48A1-209ENST00000552003 SAP30BPQ9UHR5 308 aaKnown RBP12.65□□□□□ -0.38
SLC48A1-209ENST00000552003 PA2G4Q9UQ80 394 aaKnown RBP12.65□□□□□ -0.38
SLC48A1-209ENST00000552003 SLC4A7Q9Y6M7 1214 aa12.65□□□□□ -0.38
SLC48A1-209ENST00000552003 COL11A1P12107 1806 aaPredicted RBP12.65□□□□□ -0.39
SLC48A1-209ENST00000552003 EPG5Q9HCE0 2579 aa12.64□□□□□ -0.39
SLC48A1-209ENST00000552003 RBAK-RBAKDNI3L0D1 243 aa12.64□□□□□ -0.39
SLC48A1-209ENST00000552003 CTAGE5O15320 804 aa12.64□□□□□ -0.39
SLC48A1-209ENST00000552003 CIAO1O76071 339 aa12.64□□□□□ -0.39
SLC48A1-209ENST00000552003 ALADP13716 330 aa12.64□□□□□ -0.39
SLC48A1-209ENST00000552003 ATP2A2P16615 1042 aaKnown RBP12.64□□□□□ -0.39
SLC48A1-209ENST00000552003 CSPP1Q1MSJ5 1256 aa12.64□□□□□ -0.39
SLC48A1-209ENST00000552003 TATDN1Q6P1N9 297 aa12.64□□□□□ -0.39
SLC48A1-209ENST00000552003 NCAPG2Q86XI2 1143 aa12.64□□□□□ -0.39
SLC48A1-209ENST00000552003 CRACR2BQ8N4Y2 399 aaPredicted RBP12.64□□□□□ -0.39
SLC48A1-209ENST00000552003 AATFQ9NY61 560 aaKnown RBP eCLIP12.64□□□□□ -0.39
SLC48A1-209ENST00000552003 PTPRSQ13332 1948 aa12.64□□□□□ -0.39
SLC48A1-209ENST00000552003 MROH7Q68CQ1 1323 aa12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 MYO5AQ9Y4I1 1855 aaKnown RBP12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 MCM3APO60318 1980 aa12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 SNAI1O95863 264 aaPredicted RBP12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 LDHCP07864 332 aa12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 CST5P28325 142 aaPredicted RBP12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 USP14P54578 494 aa12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 FOXK2Q01167 660 aa12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 POLA2Q14181 598 aa12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 COG2Q14746 738 aa12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 RAB3GAP1Q15042 981 aa12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 TMEM67Q5HYA8 995 aa12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 TET1Q8NFU7 2136 aa12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 SCLYQ96I15 445 aa12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 GLT1D1Q96MS3 346 aa12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 MROH8Q9H579 483 aa12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 UBE2ZQ9H832 354 aaPredicted RBP12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 ALG13Q9NP73 1137 aaKnown RBP12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 FAM186AA6NE01 2351 aa12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 ZFHX4Q86UP3 3567 aa12.63□□□□□ -0.39
SLC48A1-209ENST00000552003 GRIN2DO15399 1336 aa12.62□□□□□ -0.39
SLC48A1-209ENST00000552003 MYH1P12882 1939 aa12.62□□□□□ -0.39
SLC48A1-209ENST00000552003 A0A0U1RQG5 324 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms