RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 CCDC85BQ15834 202 aaPredicted RBP18.61■□□□□ 0.57
CACNB3-220ENST00000551716 TNNI3KQ59H18 835 aa18.61■□□□□ 0.57
CACNB3-220ENST00000551716 MSL3Q8N5Y2 521 aaKnown RBP18.61■□□□□ 0.57
CACNB3-220ENST00000551716 MMP19Q99542 508 aa18.61■□□□□ 0.57
CACNB3-220ENST00000551716 SH2D4AQ9H788 454 aa18.61■□□□□ 0.57
CACNB3-220ENST00000551716 PIH1D3Q9NQM4 214 aaKnown RBP18.61■□□□□ 0.57
CACNB3-220ENST00000551716 CXXC1Q9P0U4 656 aaPredicted RBP18.61■□□□□ 0.57
CACNB3-220ENST00000551716 FPGT-TNNI3KV9GXZ4 949 aa18.61■□□□□ 0.57
CACNB3-220ENST00000551716 SYNGAP1Q96PV0 1343 aa18.6■□□□□ 0.57
CACNB3-220ENST00000551716 MPHOSPH10O00566 681 aaKnown RBP18.6■□□□□ 0.57
CACNB3-220ENST00000551716 ADAMTS4O75173 837 aa18.6■□□□□ 0.57
CACNB3-220ENST00000551716 IDH1O75874 414 aaKnown RBP18.6■□□□□ 0.57
CACNB3-220ENST00000551716 COPB2P35606 906 aa18.6■□□□□ 0.57
CACNB3-220ENST00000551716 PBX2P40425 430 aa18.6■□□□□ 0.57
CACNB3-220ENST00000551716 C16orf59Q7L2K0 433 aa18.6■□□□□ 0.57
CACNB3-220ENST00000551716 MIGA1Q8NAN2 632 aa18.6■□□□□ 0.57
CACNB3-220ENST00000551716 GLT1D1Q96MS3 346 aa18.6■□□□□ 0.57
CACNB3-220ENST00000551716 DBNDD2Q9BQY9 259 aa18.6■□□□□ 0.57
CACNB3-220ENST00000551716 SLC28A3Q9HAS3 691 aa18.6■□□□□ 0.57
CACNB3-220ENST00000551716 HCN4Q9Y3Q4 1203 aa18.6■□□□□ 0.57
CACNB3-220ENST00000551716 A0A1W2PRG0 241 aa18.59■□□□□ 0.57
CACNB3-220ENST00000551716 ZNF865P0CJ78 1059 aaPredicted RBP18.59■□□□□ 0.57
CACNB3-220ENST00000551716 PLCD1P51178 756 aa18.59■□□□□ 0.57
CACNB3-220ENST00000551716 ADGRE1Q14246 886 aa18.59■□□□□ 0.57
CACNB3-220ENST00000551716 ZNF792Q3KQV3 632 aa18.59■□□□□ 0.57
CACNB3-220ENST00000551716 TMEM179Q6ZVK1 233 aa18.59■□□□□ 0.57
CACNB3-220ENST00000551716 PCSK9Q8NBP7 692 aaKnown RBP18.59■□□□□ 0.57
CACNB3-220ENST00000551716 KLHDC9Q8NEP7 349 aa18.59■□□□□ 0.57
CACNB3-220ENST00000551716 FAM184BQ9ULE4 1060 aa18.59■□□□□ 0.57
CACNB3-220ENST00000551716 GRXCR1A8MXD5 290 aa18.58■□□□□ 0.56
CACNB3-220ENST00000551716 OS9Q13438 667 aaPredicted RBP18.58■□□□□ 0.56
CACNB3-220ENST00000551716 KCNA10Q16322 511 aa18.58■□□□□ 0.56
CACNB3-220ENST00000551716 ZNF365Q70YC5 407 aa18.58■□□□□ 0.56
CACNB3-220ENST00000551716 RIOX2Q8IUF8 465 aa18.58■□□□□ 0.56
CACNB3-220ENST00000551716 MAGEB6Q8N7X4 407 aa18.58■□□□□ 0.56
CACNB3-220ENST00000551716 ATG4CQ96DT6 458 aa18.58■□□□□ 0.56
CACNB3-220ENST00000551716 ARHGEF10LQ9HCE6 1279 aa18.58■□□□□ 0.56
CACNB3-220ENST00000551716 PGK2P07205 417 aa18.57■□□□□ 0.56
CACNB3-220ENST00000551716 BMP1P13497 986 aa18.57■□□□□ 0.56
CACNB3-220ENST00000551716 CSF2RAP15509 400 aa18.57■□□□□ 0.56
CACNB3-220ENST00000551716 TAL1P17542 331 aaPredicted RBP18.57■□□□□ 0.56
CACNB3-220ENST00000551716 CDK7P50613 346 aa18.57■□□□□ 0.56
CACNB3-220ENST00000551716 GABPAQ06546 454 aa18.57■□□□□ 0.56
CACNB3-220ENST00000551716 TMEM132BQ14DG7 1078 aa18.57■□□□□ 0.56
CACNB3-220ENST00000551716 HERVK_113Q902F9 699 aa18.57■□□□□ 0.56
CACNB3-220ENST00000551716 VTI1AQ96AJ9 217 aa18.57■□□□□ 0.56
CACNB3-220ENST00000551716 SPC25Q9HBM1 224 aa18.57■□□□□ 0.56
CACNB3-220ENST00000551716 ADAMTS5Q9UNA0 930 aa18.57■□□□□ 0.56
CACNB3-220ENST00000551716 PNMA6EA0A0J9YXQ4 647 aa18.56■□□□□ 0.56
CACNB3-220ENST00000551716 WDR46O15213 610 aaKnown RBP18.56■□□□□ 0.56
CACNB3-220ENST00000551716 TLR3O15455 904 aaKnown RBP18.56■□□□□ 0.56
CACNB3-220ENST00000551716 DUSP11O75319 330 aaKnown RBP18.56■□□□□ 0.56
CACNB3-220ENST00000551716 CCSAPQ6IQ19 270 aaPredicted RBP18.56■□□□□ 0.56
CACNB3-220ENST00000551716 SWAP70Q9UH65 585 aa18.56■□□□□ 0.56
CACNB3-220ENST00000551716 TMX2Q9Y320 296 aa18.56■□□□□ 0.56
CACNB3-220ENST00000551716 FOCADQ5VW36 1801 aa18.56■□□□□ 0.56
CACNB3-220ENST00000551716 SYNRGQ9UMZ2 1314 aa18.55■□□□□ 0.56
CACNB3-220ENST00000551716 FGBP02675 491 aa18.55■□□□□ 0.56
CACNB3-220ENST00000551716 CST5P28325 142 aaPredicted RBP18.55■□□□□ 0.56
CACNB3-220ENST00000551716 STAT3P40763 770 aa18.55■□□□□ 0.56
CACNB3-220ENST00000551716 VCPKMTQ9H867 229 aa18.55■□□□□ 0.56
CACNB3-220ENST00000551716 IL23AQ9NPF7 189 aa18.55■□□□□ 0.56
CACNB3-220ENST00000551716 MYO9BQ13459 2157 aa18.54■□□□□ 0.56
CACNB3-220ENST00000551716 A0A0U1RQG5 324 aaPredicted RBP18.54■□□□□ 0.56
CACNB3-220ENST00000551716 ARVCFO00192 962 aa18.54■□□□□ 0.56
CACNB3-220ENST00000551716 APBB1O00213 710 aa18.54■□□□□ 0.56
CACNB3-220ENST00000551716 IPO8O15397 1037 aaKnown RBP18.54■□□□□ 0.56
CACNB3-220ENST00000551716 TRMT2AQ8IZ69 625 aaKnown RBP18.54■□□□□ 0.56
CACNB3-220ENST00000551716 CDCA7LQ96GN5 454 aa18.54■□□□□ 0.56
CACNB3-220ENST00000551716 CRNKL1Q9BZJ0 848 aaKnown RBP18.54■□□□□ 0.56
CACNB3-220ENST00000551716 MCM9Q9NXL9 1143 aa18.54■□□□□ 0.56
CACNB3-220ENST00000551716 SMCHD1A6NHR9 2005 aa18.53■□□□□ 0.56
CACNB3-220ENST00000551716 ACRP10323 421 aa18.53■□□□□ 0.56
CACNB3-220ENST00000551716 KIAA1755Q5JYT7 1200 aa18.53■□□□□ 0.56
CACNB3-220ENST00000551716 SAMD1Q6SPF0 538 aaPredicted RBP18.53■□□□□ 0.56
CACNB3-220ENST00000551716 SPICE1Q8N0Z3 855 aa18.53■□□□□ 0.56
CACNB3-220ENST00000551716 RIOK1Q9BRS2 568 aaKnown RBP18.53■□□□□ 0.56
CACNB3-220ENST00000551716 NKX2-4Q9H2Z4 354 aa18.53■□□□□ 0.56
CACNB3-220ENST00000551716 CDK5RAP2Q96SN8 1893 aa18.52■□□□□ 0.56
CACNB3-220ENST00000551716 MAGEB6P1A0A0J9YX57 407 aa18.52■□□□□ 0.56
CACNB3-220ENST00000551716 ERC2O15083 957 aa18.52■□□□□ 0.56
CACNB3-220ENST00000551716 MAMDC4Q6UXC1 1216 aa18.52■□□□□ 0.56
CACNB3-220ENST00000551716 CCDC17Q96LX7 622 aa18.52■□□□□ 0.56
CACNB3-220ENST00000551716 NECAB3Q96P71 396 aaPredicted RBP18.52■□□□□ 0.56
CACNB3-220ENST00000551716 LRFN3Q9BTN0 628 aa18.52■□□□□ 0.56
CACNB3-220ENST00000551716 MYH1P12882 1939 aa18.51■□□□□ 0.55
CACNB3-220ENST00000551716 VWA5AO00534 786 aa18.51■□□□□ 0.55
CACNB3-220ENST00000551716 SURF6O75683 361 aaKnown RBP18.51■□□□□ 0.55
CACNB3-220ENST00000551716 ASGR1P07306 291 aa18.51■□□□□ 0.55
CACNB3-220ENST00000551716 C6orf222P0C671 652 aaPredicted RBP18.51■□□□□ 0.55
CACNB3-220ENST00000551716 ICA1Q05084 483 aa18.51■□□□□ 0.55
CACNB3-220ENST00000551716 POLA2Q14181 598 aa18.51■□□□□ 0.55
CACNB3-220ENST00000551716 TMEM31Q5JXX7 168 aa18.51■□□□□ 0.55
CACNB3-220ENST00000551716 ZNF467Q7Z7K2 595 aaPredicted RBP18.51■□□□□ 0.55
CACNB3-220ENST00000551716 SIAH1Q8IUQ4 282 aa18.51■□□□□ 0.55
CACNB3-220ENST00000551716 FAM126BQ8IXS8 530 aa18.51■□□□□ 0.55
CACNB3-220ENST00000551716 RPUSD2Q8IZ73 545 aaKnown RBP18.51■□□□□ 0.55
CACNB3-220ENST00000551716 LENG1Q96BZ8 264 aaPredicted RBP18.51■□□□□ 0.55
CACNB3-220ENST00000551716 DDX11Q96FC9 970 aa18.51■□□□□ 0.55
CACNB3-220ENST00000551716 SEZ6LQ9BYH1 1024 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms