RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 BMP3P12645 472 aa19.05■□□□□ 0.64
CHMP1A-209ENST00000550872 SLC1A4P43007 532 aa19.05■□□□□ 0.64
CHMP1A-209ENST00000550872 RGS19P49795 217 aa19.05■□□□□ 0.64
CHMP1A-209ENST00000550872 ANTXR2P58335 489 aa19.05■□□□□ 0.64
CHMP1A-209ENST00000550872 ADCK5Q3MIX3 580 aa19.05■□□□□ 0.64
CHMP1A-209ENST00000550872 IFIT1BQ5T764 474 aaKnown RBP19.05■□□□□ 0.64
CHMP1A-209ENST00000550872 ANKRD13CQ8N6S4 541 aa19.05■□□□□ 0.64
CHMP1A-209ENST00000550872 SNX14Q9Y5W7 946 aa19.05■□□□□ 0.64
CHMP1A-209ENST00000550872 PRC1O43663 620 aa19.04■□□□□ 0.64
CHMP1A-209ENST00000550872 BCRP11274 1271 aa19.04■□□□□ 0.64
CHMP1A-209ENST00000550872 DSG3P32926 999 aa19.04■□□□□ 0.64
CHMP1A-209ENST00000550872 SEC23AQ15436 765 aa19.04■□□□□ 0.64
CHMP1A-209ENST00000550872 C8orf34Q49A92 452 aa19.04■□□□□ 0.64
CHMP1A-209ENST00000550872 TMEM67Q5HYA8 995 aa19.04■□□□□ 0.64
CHMP1A-209ENST00000550872 GTF3C2Q8WUA4 911 aaPredicted RBP19.04■□□□□ 0.64
CHMP1A-209ENST00000550872 GMCL1Q96IK5 515 aa19.04■□□□□ 0.64
CHMP1A-209ENST00000550872 PAGR1Q9BTK6 254 aa19.04■□□□□ 0.64
CHMP1A-209ENST00000550872 FBXO28Q9NVF7 368 aa19.04■□□□□ 0.64
CHMP1A-209ENST00000550872 SPDYE16A6NNV3 312 aaPredicted RBP19.03■□□□□ 0.64
CHMP1A-209ENST00000550872 SEC24BO95487 1268 aa19.03■□□□□ 0.64
CHMP1A-209ENST00000550872 COL9A3Q14050 684 aaPredicted RBP19.03■□□□□ 0.64
CHMP1A-209ENST00000550872 WTAPQ15007 396 aa19.03■□□□□ 0.64
CHMP1A-209ENST00000550872 CCDC96Q2M329 555 aa19.03■□□□□ 0.64
CHMP1A-209ENST00000550872 PNMA1Q8ND90 353 aa19.03■□□□□ 0.64
CHMP1A-209ENST00000550872 DCAF4Q8WV16 495 aa19.03■□□□□ 0.64
CHMP1A-209ENST00000550872 MTA3Q9BTC8 594 aa19.03■□□□□ 0.64
CHMP1A-209ENST00000550872 RBPJLQ9UBG7 517 aa19.03■□□□□ 0.64
CHMP1A-209ENST00000550872 TMEM232C9JQI7 657 aa19.02■□□□□ 0.64
CHMP1A-209ENST00000550872 ECM2O94769 699 aaPredicted RBP19.02■□□□□ 0.64
CHMP1A-209ENST00000550872 KIF22Q14807 665 aa19.02■□□□□ 0.64
CHMP1A-209ENST00000550872 FAM110CQ1W6H9 321 aa19.02■□□□□ 0.64
CHMP1A-209ENST00000550872 KCTD1Q719H9 257 aa19.02■□□□□ 0.64
CHMP1A-209ENST00000550872 IGDCC4Q8TDY8 1250 aa19.02■□□□□ 0.64
CHMP1A-209ENST00000550872 ATG4CQ96DT6 458 aa19.02■□□□□ 0.64
CHMP1A-209ENST00000550872 ERO1AQ96HE7 468 aa19.02■□□□□ 0.64
CHMP1A-209ENST00000550872 TMEM87BQ96K49 555 aa19.02■□□□□ 0.64
CHMP1A-209ENST00000550872 JAKMIP1Q96N16 626 aaKnown RBP19.02■□□□□ 0.64
CHMP1A-209ENST00000550872 SLF1Q9BQI6 1058 aa19.02■□□□□ 0.64
CHMP1A-209ENST00000550872 FEM1BQ9UK73 627 aa19.02■□□□□ 0.64
CHMP1A-209ENST00000550872 PPP1R9AQ9ULJ8 1098 aa19.02■□□□□ 0.64
CHMP1A-209ENST00000550872 RABGAP1Q9Y3P9 1069 aa19.02■□□□□ 0.64
CHMP1A-209ENST00000550872 MYPNQ86TC9 1320 aa19.01■□□□□ 0.63
CHMP1A-209ENST00000550872 PEX10O60683 326 aa19.01■□□□□ 0.63
CHMP1A-209ENST00000550872 HMGB1P09429 215 aaKnown RBP19.01■□□□□ 0.63
CHMP1A-209ENST00000550872 PSMA5P28066 241 aa19.01■□□□□ 0.63
CHMP1A-209ENST00000550872 IKQ13123 557 aaPredicted RBP19.01■□□□□ 0.63
CHMP1A-209ENST00000550872 LBX2Q6XYB7 198 aa19.01■□□□□ 0.63
CHMP1A-209ENST00000550872 DHX32Q7L7V1 743 aaKnown RBP19.01■□□□□ 0.63
CHMP1A-209ENST00000550872 RASGRP2Q7LDG7 609 aa19.01■□□□□ 0.63
CHMP1A-209ENST00000550872 GPRC5AQ8NFJ5 357 aa19.01■□□□□ 0.63
CHMP1A-209ENST00000550872 CD99L2Q8TCZ2 262 aa19.01■□□□□ 0.63
CHMP1A-209ENST00000550872 CHURC1Q8WUH1 139 aa19.01■□□□□ 0.63
CHMP1A-209ENST00000550872 MCOLN1Q9GZU1 580 aa19.01■□□□□ 0.63
CHMP1A-209ENST00000550872 TXNRD2Q9NNW7 524 aa19.01■□□□□ 0.63
CHMP1A-209ENST00000550872 MORF4L1Q9UBU8 362 aa19.01■□□□□ 0.63
CHMP1A-209ENST00000550872 CCDC85CA6NKD9 419 aa19■□□□□ 0.63
CHMP1A-209ENST00000550872 PDHBP11177 359 aa19■□□□□ 0.63
CHMP1A-209ENST00000550872 LACTBP83111 547 aaPredicted RBP19■□□□□ 0.63
CHMP1A-209ENST00000550872 POTEEQ6S8J3 1075 aa19■□□□□ 0.63
CHMP1A-209ENST00000550872 FAM160B2Q86V87 743 aa19■□□□□ 0.63
CHMP1A-209ENST00000550872 TMTC2Q8N394 836 aa19■□□□□ 0.63
CHMP1A-209ENST00000550872 MB21D1Q8N884 522 aa19■□□□□ 0.63
CHMP1A-209ENST00000550872 PRPF38AQ8NAV1 312 aaKnown RBP19■□□□□ 0.63
CHMP1A-209ENST00000550872 KIFC2Q96AC6 838 aa19■□□□□ 0.63
CHMP1A-209ENST00000550872 LRRC2Q9BYS8 371 aa19■□□□□ 0.63
CHMP1A-209ENST00000550872 SENP2Q9HC62 589 aa19■□□□□ 0.63
CHMP1A-209ENST00000550872 GPCPD1Q9NPB8 672 aa19■□□□□ 0.63
CHMP1A-209ENST00000550872 GPHNQ9NQX3 736 aaPredicted RBP19■□□□□ 0.63
CHMP1A-209ENST00000550872 FRMPD2Q68DX3 1309 aaPredicted RBP19■□□□□ 0.63
CHMP1A-209ENST00000550872 SH2B2O14492 632 aaPredicted RBP18.99■□□□□ 0.63
CHMP1A-209ENST00000550872 SNHG28P0DPA3 235 aa18.99■□□□□ 0.63
CHMP1A-209ENST00000550872 STAT2P52630 851 aa18.99■□□□□ 0.63
CHMP1A-209ENST00000550872 ERVK-9P63128 1117 aa18.99■□□□□ 0.63
CHMP1A-209ENST00000550872 ERVK-24P63145 666 aa18.99■□□□□ 0.63
CHMP1A-209ENST00000550872 EXOSC10Q01780 885 aaKnown RBP18.99■□□□□ 0.63
CHMP1A-209ENST00000550872 ZNF543Q08ER8 600 aa18.99■□□□□ 0.63
CHMP1A-209ENST00000550872 ARHGEF6Q15052 776 aa18.99■□□□□ 0.63
CHMP1A-209ENST00000550872 Q3C1V9 767 aa18.99■□□□□ 0.63
CHMP1A-209ENST00000550872 BLOC1S2Q6QNY1 142 aa18.99■□□□□ 0.63
CHMP1A-209ENST00000550872 NFXL1Q6ZNB6 911 aa18.99■□□□□ 0.63
CHMP1A-209ENST00000550872 TCEANC2Q96MN5 208 aa18.99■□□□□ 0.63
CHMP1A-209ENST00000550872 LY9Q9HBG7 655 aa18.99■□□□□ 0.63
CHMP1A-209ENST00000550872 BTBD7Q9P203 1132 aa18.99■□□□□ 0.63
CHMP1A-209ENST00000550872 CTDP1Q9Y5B0 961 aaPredicted RBP18.99■□□□□ 0.63
CHMP1A-209ENST00000550872 WDR19Q8NEZ3 1342 aa18.99■□□□□ 0.63
CHMP1A-209ENST00000550872 RLFQ13129 1914 aa18.98■□□□□ 0.63
CHMP1A-209ENST00000550872 VWA5AO00534 786 aa18.98■□□□□ 0.63
CHMP1A-209ENST00000550872 PLA2G6O60733 806 aa18.98■□□□□ 0.63
CHMP1A-209ENST00000550872 CNMDO75829 334 aa18.98■□□□□ 0.63
CHMP1A-209ENST00000550872 CPA1P15085 419 aa18.98■□□□□ 0.63
CHMP1A-209ENST00000550872 CASTP20810 708 aaKnown RBP18.98■□□□□ 0.63
CHMP1A-209ENST00000550872 PSMC4P43686 418 aa18.98■□□□□ 0.63
CHMP1A-209ENST00000550872 TTBK2Q6IQ55 1244 aa18.98■□□□□ 0.63
CHMP1A-209ENST00000550872 CATIPQ7Z7H3 387 aa18.98■□□□□ 0.63
CHMP1A-209ENST00000550872 CCAR1Q8IX12 1150 aaKnown RBP18.98■□□□□ 0.63
CHMP1A-209ENST00000550872 ARHGAP39Q9C0H5 1083 aa18.98■□□□□ 0.63
CHMP1A-209ENST00000550872 ADAMTS5Q9UNA0 930 aa18.98■□□□□ 0.63
CHMP1A-209ENST00000550872 CCDC69A6NI79 296 aa18.97■□□□□ 0.63
CHMP1A-209ENST00000550872 ZBED4O75132 1171 aa18.97■□□□□ 0.63
CHMP1A-209ENST00000550872 FMNL1O95466 1100 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms