RNA–Protein interactions for RNA: ENST00000550846.5

PFDN5-211, Transcript of prefoldin subunit 5, humanhuman

TSL 2 BASIC

Gene PFDN5, Length 392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-211ENST00000550846 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.65□□□□□ -0.86
PFDN5-211ENST00000550846 MB21D1Q8N884 522 aa9.65□□□□□ -0.86
PFDN5-211ENST00000550846 SHCBP1Q8NEM2 672 aa9.65□□□□□ -0.86
PFDN5-211ENST00000550846 TRIM43Q96BQ3 446 aaPredicted RBP9.65□□□□□ -0.86
PFDN5-211ENST00000550846 CHMP4CQ96CF2 233 aa9.65□□□□□ -0.86
PFDN5-211ENST00000550846 MMP19Q99542 508 aa9.65□□□□□ -0.86
PFDN5-211ENST00000550846 COL25A1Q9BXS0 654 aaPredicted RBP9.65□□□□□ -0.86
PFDN5-211ENST00000550846 MROH8Q9H579 483 aa9.65□□□□□ -0.86
PFDN5-211ENST00000550846 SH2D4AQ9H788 454 aa9.65□□□□□ -0.86
PFDN5-211ENST00000550846 XPNPEP3Q9NQH7 507 aa9.65□□□□□ -0.86
PFDN5-211ENST00000550846 PDLIM7Q9NR12 457 aa9.65□□□□□ -0.86
PFDN5-211ENST00000550846 SLC5A4Q9NY91 659 aa9.65□□□□□ -0.86
PFDN5-211ENST00000550846 SWAP70Q9UH65 585 aa9.65□□□□□ -0.86
PFDN5-211ENST00000550846 TMX2Q9Y320 296 aa9.65□□□□□ -0.86
PFDN5-211ENST00000550846 SLC4A4Q9Y6R1 1079 aa9.65□□□□□ -0.86
PFDN5-211ENST00000550846 LTBP2Q14767 1821 aa9.64□□□□□ -0.87
PFDN5-211ENST00000550846 ZNF236Q9UL36 1845 aa9.64□□□□□ -0.87
PFDN5-211ENST00000550846 POTEB2H3BUK9 544 aa9.64□□□□□ -0.87
PFDN5-211ENST00000550846 WDR46O15213 610 aaKnown RBP9.64□□□□□ -0.87
PFDN5-211ENST00000550846 PQBP1O60828 265 aaKnown RBP9.64□□□□□ -0.87
PFDN5-211ENST00000550846 HMMRO75330 724 aa9.64□□□□□ -0.87
PFDN5-211ENST00000550846 IGHA2P01877 340 aa9.64□□□□□ -0.87
PFDN5-211ENST00000550846 ITGB8P26012 769 aa9.64□□□□□ -0.87
PFDN5-211ENST00000550846 TLE2Q04725 743 aa9.64□□□□□ -0.87
PFDN5-211ENST00000550846 C12orf60Q5U649 245 aa9.64□□□□□ -0.87
PFDN5-211ENST00000550846 TSHZ3Q63HK5 1081 aa9.64□□□□□ -0.87
PFDN5-211ENST00000550846 C16orf86Q6ZW13 317 aa9.64□□□□□ -0.87
PFDN5-211ENST00000550846 AMOTL1Q8IY63 956 aa9.64□□□□□ -0.87
PFDN5-211ENST00000550846 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.64□□□□□ -0.878e-7■□□□□ 9.6
PFDN5-211ENST00000550846 BAZ2AQ9UIF9 1905 aaKnown RBP9.64□□□□□ -0.87
PFDN5-211ENST00000550846 RLFQ13129 1914 aa9.63□□□□□ -0.87
PFDN5-211ENST00000550846 VWA5AO00534 786 aa9.63□□□□□ -0.87
PFDN5-211ENST00000550846 RARBP10826 455 aa9.63□□□□□ -0.87
PFDN5-211ENST00000550846 ATP5JP18859 108 aa9.63□□□□□ -0.87
PFDN5-211ENST00000550846 IRX5P78411 483 aaPredicted RBP9.63□□□□□ -0.87
PFDN5-211ENST00000550846 KCTD2Q14681 263 aa9.63□□□□□ -0.87
PFDN5-211ENST00000550846 CTR9Q6PD62 1173 aa9.63□□□□□ -0.87
PFDN5-211ENST00000550846 TMED8Q6PL24 325 aaPredicted RBP9.63□□□□□ -0.87
PFDN5-211ENST00000550846 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.63□□□□□ -0.87
PFDN5-211ENST00000550846 MYLIPQ8WY64 445 aa9.63□□□□□ -0.87
PFDN5-211ENST00000550846 DDRGK1Q96HY6 314 aa9.63□□□□□ -0.87
PFDN5-211ENST00000550846 YTHDC1Q96MU7 727 aaKnown RBP9.63□□□□□ -0.87
PFDN5-211ENST00000550846 CDX2Q99626 313 aaPredicted RBP9.63□□□□□ -0.87
PFDN5-211ENST00000550846 HAUS7Q99871 368 aa9.63□□□□□ -0.87
PFDN5-211ENST00000550846 PUS7LQ9H0K6 701 aaKnown RBP9.63□□□□□ -0.87
PFDN5-211ENST00000550846 GOPCQ9HD26 462 aa9.63□□□□□ -0.87
PFDN5-211ENST00000550846 ATP8A2Q9NTI2 1148 aa9.63□□□□□ -0.87
PFDN5-211ENST00000550846 ISY1Q9ULR0 285 aaKnown RBP9.63□□□□□ -0.87
PFDN5-211ENST00000550846 A0A1W2PQ45 241 aaPredicted RBP9.62□□□□□ -0.87
PFDN5-211ENST00000550846 A0A1W2PQY0 241 aa9.62□□□□□ -0.87
PFDN5-211ENST00000550846 PRDM1O75626 825 aa9.62□□□□□ -0.87
PFDN5-211ENST00000550846 SLC25A27O95847 323 aa9.62□□□□□ -0.87
PFDN5-211ENST00000550846 CLTBP09497 229 aa9.62□□□□□ -0.87
PFDN5-211ENST00000550846 STAT3P40763 770 aa9.62□□□□□ -0.87
PFDN5-211ENST00000550846 EPHB4P54760 987 aa9.62□□□□□ -0.87
PFDN5-211ENST00000550846 SNRNP48Q6IEG0 339 aaKnown RBP9.62□□□□□ -0.87
PFDN5-211ENST00000550846 RPAP2Q8IXW5 612 aaPredicted RBP9.62□□□□□ -0.87
PFDN5-211ENST00000550846 ABRAQ8N0Z2 381 aa9.62□□□□□ -0.87
PFDN5-211ENST00000550846 CPXCR1Q8N123 301 aa9.62□□□□□ -0.87
PFDN5-211ENST00000550846 MAFAQ8NHW3 353 aaPredicted RBP9.62□□□□□ -0.87
PFDN5-211ENST00000550846 RNPC3Q96LT9 517 aaKnown RBP9.62□□□□□ -0.87
PFDN5-211ENST00000550846 CCDC17Q96LX7 622 aa9.62□□□□□ -0.87
PFDN5-211ENST00000550846 TINF2Q9BSI4 451 aa9.62□□□□□ -0.87
PFDN5-211ENST00000550846 TTYH1Q9H313 450 aaPredicted RBP9.62□□□□□ -0.87
PFDN5-211ENST00000550846 SEMA6BQ9H3T3 888 aa9.62□□□□□ -0.87
PFDN5-211ENST00000550846 ZBTB40Q9NUA8 1239 aa9.62□□□□□ -0.87
PFDN5-211ENST00000550846 ZHX1Q9UKY1 873 aaPredicted RBP9.62□□□□□ -0.87
PFDN5-211ENST00000550846 PPP1R9AQ9ULJ8 1098 aa9.62□□□□□ -0.87
PFDN5-211ENST00000550846 EYSQ5T1H1 3165 aa9.62□□□□□ -0.87
PFDN5-211ENST00000550846 MYH8P13535 1937 aa9.62□□□□□ -0.87
PFDN5-211ENST00000550846 ZBED9Q6R2W3 1325 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 MYADML2A6NDP7 307 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 MINDY4BA8MYZ0 360 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 RAB11FIP3O75154 756 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 FOSL2P15408 326 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 RAG1P15918 1043 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 SNX17Q15036 470 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 ZNF792Q3KQV3 632 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 C20orf194Q5TEA3 1177 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 FAM109BQ6ICB4 259 aaPredicted RBP9.61□□□□□ -0.87
PFDN5-211ENST00000550846 RNF180Q86T96 592 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 RIOX2Q8IUF8 465 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 REPS2Q8NFH8 660 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 KIFC2Q96AC6 838 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 SLF1Q9BQI6 1058 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.61□□□□□ -0.87
PFDN5-211ENST00000550846 KANSL2Q9H9L4 492 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 HOMER2Q9NSB8 354 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 ZNF214Q9UL59 606 aaPredicted RBP9.61□□□□□ -0.87
PFDN5-211ENST00000550846 DDX19BQ9UMR2 479 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 PHF24Q9UPV7 400 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 CNPY2Q9Y2B0 182 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 RIPK3Q9Y572 518 aa9.61□□□□□ -0.87
PFDN5-211ENST00000550846 CTDP1Q9Y5B0 961 aaPredicted RBP9.61□□□□□ -0.87
PFDN5-211ENST00000550846 COL11A1P12107 1806 aaPredicted RBP9.61□□□□□ -0.87
PFDN5-211ENST00000550846 SYNRGQ9UMZ2 1314 aa9.6□□□□□ -0.87
PFDN5-211ENST00000550846 NDUFB10O96000 172 aa9.6□□□□□ -0.87
PFDN5-211ENST00000550846 ZNF865P0CJ78 1059 aaPredicted RBP9.6□□□□□ -0.87
PFDN5-211ENST00000550846 AKR1A1P14550 325 aa9.6□□□□□ -0.87
PFDN5-211ENST00000550846 RASA1P20936 1047 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms