RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 CAPN15O75808 1086 aa20.55■□□□□ 0.88
CDK4-207ENST00000550419 PRMT2P55345 433 aa20.55■□□□□ 0.88
CDK4-207ENST00000550419 ERVK-9P63128 1117 aa20.55■□□□□ 0.88
CDK4-207ENST00000550419 ERVK-24P63145 666 aa20.55■□□□□ 0.88
CDK4-207ENST00000550419 TRIM47Q96LD4 638 aa20.55■□□□□ 0.88
CDK4-207ENST00000550419 UBAC1Q9BSL1 405 aa20.55■□□□□ 0.88
CDK4-207ENST00000550419 MTA3Q9BTC8 594 aa20.55■□□□□ 0.88
CDK4-207ENST00000550419 PPP1R9AQ9ULJ8 1098 aa20.55■□□□□ 0.88
CDK4-207ENST00000550419 A0A0G2JMZ2 1700 aa20.54■□□□□ 0.88
CDK4-207ENST00000550419 BMP3P12645 472 aa20.54■□□□□ 0.88
CDK4-207ENST00000550419 PSMC4P43686 418 aa20.54■□□□□ 0.88
CDK4-207ENST00000550419 FCGRTP55899 365 aa20.54■□□□□ 0.88
CDK4-207ENST00000550419 CAP1Q01518 475 aa20.54■□□□□ 0.88
CDK4-207ENST00000550419 ENAHQ8N8S7 591 aaPredicted RBP20.54■□□□□ 0.88
CDK4-207ENST00000550419 PRPF38AQ8NAV1 312 aaKnown RBP20.54■□□□□ 0.88
CDK4-207ENST00000550419 DCAF4Q8WV16 495 aa20.54■□□□□ 0.88
CDK4-207ENST00000550419 SLF1Q9BQI6 1058 aa20.54■□□□□ 0.88
CDK4-207ENST00000550419 FEM1BQ9UK73 627 aa20.54■□□□□ 0.88
CDK4-207ENST00000550419 TRIM17Q9Y577 477 aa20.54■□□□□ 0.88
CDK4-207ENST00000550419 TNKSO95271 1327 aa20.53■□□□□ 0.88
CDK4-207ENST00000550419 CNMDO75829 334 aa20.53■□□□□ 0.88
CDK4-207ENST00000550419 HOXD10P28358 340 aa20.53■□□□□ 0.88
CDK4-207ENST00000550419 CTGFP29279 349 aa20.53■□□□□ 0.88
CDK4-207ENST00000550419 SLC1A4P43007 532 aa20.53■□□□□ 0.88
CDK4-207ENST00000550419 CCNA1P78396 465 aa20.53■□□□□ 0.88
CDK4-207ENST00000550419 CYB5R4Q7L1T6 521 aa20.53■□□□□ 0.88
CDK4-207ENST00000550419 MB21D2Q8IYB1 491 aaPredicted RBP20.53■□□□□ 0.88
CDK4-207ENST00000550419 KCNB2Q92953 911 aa20.53■□□□□ 0.88
CDK4-207ENST00000550419 NUP88Q99567 741 aaPredicted RBP20.53■□□□□ 0.88
CDK4-207ENST00000550419 ZKSCAN3Q9BRR0 538 aa20.53■□□□□ 0.88
CDK4-207ENST00000550419 ARHGAP39Q9C0H5 1083 aa20.53■□□□□ 0.88
CDK4-207ENST00000550419 FBXO28Q9NVF7 368 aa20.53■□□□□ 0.88
CDK4-207ENST00000550419 PARP14Q460N5 1801 aa20.53■□□□□ 0.88
CDK4-207ENST00000550419 EIF5BO60841 1220 aaKnown RBP20.52■□□□□ 0.88
CDK4-207ENST00000550419 SNHG28P0DPA3 235 aa20.52■□□□□ 0.88
CDK4-207ENST00000550419 FDX1P10109 184 aa20.52■□□□□ 0.88
CDK4-207ENST00000550419 ZKSCAN1P17029 563 aaPredicted RBP20.52■□□□□ 0.88
CDK4-207ENST00000550419 MCCP23508 829 aa20.52■□□□□ 0.88
CDK4-207ENST00000550419 MAPK4P31152 587 aa20.52■□□□□ 0.88
CDK4-207ENST00000550419 SEC23AQ15436 765 aa20.52■□□□□ 0.88
CDK4-207ENST00000550419 FBXO46Q6PJ61 603 aaPredicted RBP20.52■□□□□ 0.88
CDK4-207ENST00000550419 ATG4CQ96DT6 458 aa20.52■□□□□ 0.88
CDK4-207ENST00000550419 PAGR1Q9BTK6 254 aa20.52■□□□□ 0.88
CDK4-207ENST00000550419 MCOLN1Q9GZU1 580 aa20.52■□□□□ 0.88
CDK4-207ENST00000550419 BTBD7Q9P203 1132 aa20.52■□□□□ 0.88
CDK4-207ENST00000550419 VWA5AO00534 786 aa20.51■□□□□ 0.87
CDK4-207ENST00000550419 FMNL1O95466 1100 aaPredicted RBP20.51■□□□□ 0.87
CDK4-207ENST00000550419 HSPA4P34932 840 aa20.51■□□□□ 0.87
CDK4-207ENST00000550419 STAT2P52630 851 aa20.51■□□□□ 0.87
CDK4-207ENST00000550419 KRT32Q14532 448 aa20.51■□□□□ 0.87
CDK4-207ENST00000550419 SART3Q15020 963 aaKnown RBP20.51■□□□□ 0.87
CDK4-207ENST00000550419 Q3C1V9 767 aa20.51■□□□□ 0.87
CDK4-207ENST00000550419 FAM160B2Q86V87 743 aa20.51■□□□□ 0.87
CDK4-207ENST00000550419 PNMA1Q8ND90 353 aa20.51■□□□□ 0.87
CDK4-207ENST00000550419 CHURC1Q8WUH1 139 aa20.51■□□□□ 0.87
CDK4-207ENST00000550419 KAT14Q9H8E8 782 aa20.51■□□□□ 0.87
CDK4-207ENST00000550419 SRRDQ9UH36 339 aa20.51■□□□□ 0.87
CDK4-207ENST00000550419 PTPN22Q9Y2R2 807 aa20.51■□□□□ 0.87
CDK4-207ENST00000550419 ERICH2A1L162 156 aa20.5■□□□□ 0.87
CDK4-207ENST00000550419 TNPO2O14787 897 aaKnown RBP20.5■□□□□ 0.87
CDK4-207ENST00000550419 PDHBP11177 359 aa20.5■□□□□ 0.87
CDK4-207ENST00000550419 MCM5P33992 734 aa20.5■□□□□ 0.87
CDK4-207ENST00000550419 IFIT1BQ5T764 474 aaKnown RBP20.5■□□□□ 0.87
CDK4-207ENST00000550419 SHCBP1Q8NEM2 672 aa20.5■□□□□ 0.87
CDK4-207ENST00000550419 COA7Q96BR5 231 aa20.5■□□□□ 0.87
CDK4-207ENST00000550419 TMEM232C9JQI7 657 aa20.49■□□□□ 0.87
CDK4-207ENST00000550419 IFIT3O14879 490 aaKnown RBP20.49■□□□□ 0.87
CDK4-207ENST00000550419 ATP2A1O14983 1001 aa20.49■□□□□ 0.87
CDK4-207ENST00000550419 ANTXR2P58335 489 aa20.49■□□□□ 0.87
CDK4-207ENST00000550419 BTNL9Q6UXG8 535 aa20.49■□□□□ 0.87
CDK4-207ENST00000550419 REPS2Q8NFH8 660 aa20.49■□□□□ 0.87
CDK4-207ENST00000550419 SPATC1LQ9H0A9 340 aa20.49■□□□□ 0.87
CDK4-207ENST00000550419 MGAMO43451 1857 aa20.48■□□□□ 0.87
CDK4-207ENST00000550419 PEX10O60683 326 aa20.48■□□□□ 0.87
CDK4-207ENST00000550419 ZNF543Q08ER8 600 aa20.48■□□□□ 0.87
CDK4-207ENST00000550419 GPATCH4Q5T3I0 446 aaKnown RBP20.48■□□□□ 0.87
CDK4-207ENST00000550419 KCTD1Q719H9 257 aa20.48■□□□□ 0.87
CDK4-207ENST00000550419 RASEFQ8IZ41 740 aa20.48■□□□□ 0.87
CDK4-207ENST00000550419 IGDCC4Q8TDY8 1250 aa20.48■□□□□ 0.87
CDK4-207ENST00000550419 TMEM87BQ96K49 555 aa20.48■□□□□ 0.87
CDK4-207ENST00000550419 USP26Q9BXU7 913 aa20.48■□□□□ 0.87
CDK4-207ENST00000550419 PORCNQ9H237 461 aa20.48■□□□□ 0.87
CDK4-207ENST00000550419 SLC38A10Q9HBR0 1119 aa20.48■□□□□ 0.87
CDK4-207ENST00000550419 ZNF214Q9UL59 606 aaPredicted RBP20.48■□□□□ 0.87
CDK4-207ENST00000550419 WDR19Q8NEZ3 1342 aa20.48■□□□□ 0.87
CDK4-207ENST00000550419 ZBED4O75132 1171 aa20.47■□□□□ 0.87
CDK4-207ENST00000550419 HMGB1P09429 215 aaKnown RBP20.47■□□□□ 0.87
CDK4-207ENST00000550419 COPB2P35606 906 aa20.47■□□□□ 0.87
CDK4-207ENST00000550419 OAZ1P54368 228 aa20.47■□□□□ 0.87
CDK4-207ENST00000550419 TMEM132BQ14DG7 1078 aa20.47■□□□□ 0.87
CDK4-207ENST00000550419 CCAR1Q8IX12 1150 aaKnown RBP20.47■□□□□ 0.87
CDK4-207ENST00000550419 TMTC2Q8N394 836 aa20.47■□□□□ 0.87
CDK4-207ENST00000550419 KIFC2Q96AC6 838 aa20.47■□□□□ 0.87
CDK4-207ENST00000550419 NEK1Q96PY6 1258 aa20.47■□□□□ 0.87
CDK4-207ENST00000550419 MOV10L1Q9BXT6 1211 aaKnown RBP20.47■□□□□ 0.87
CDK4-207ENST00000550419 MROH8Q9H579 483 aa20.47■□□□□ 0.87
CDK4-207ENST00000550419 ZSWIM8A7E2V4 1837 aa20.47■□□□□ 0.87
CDK4-207ENST00000550419 PRC1O43663 620 aa20.46■□□□□ 0.87
CDK4-207ENST00000550419 SLC25A27O95847 323 aa20.46■□□□□ 0.87
CDK4-207ENST00000550419 IRF5Q13568 498 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms