RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 VIL1P09327 827 aaKnown RBP7.89□□□□□ -1.15
HCFC2-204ENST00000550335 PDGFRBP09619 1106 aa7.89□□□□□ -1.15
HCFC2-204ENST00000550335 ELNP15502 786 aa7.89□□□□□ -1.15
HCFC2-204ENST00000550335 SDSP20132 328 aa7.89□□□□□ -1.15
HCFC2-204ENST00000550335 SOX5P35711 763 aa7.89□□□□□ -1.15
HCFC2-204ENST00000550335 CAP2P40123 477 aa7.89□□□□□ -1.15
HCFC2-204ENST00000550335 PREPP48147 710 aa7.89□□□□□ -1.15
HCFC2-204ENST00000550335 SUMO1P63165 101 aaKnown RBP7.89□□□□□ -1.15
HCFC2-204ENST00000550335 FNDC3BQ53EP0 1204 aaKnown RBP7.89□□□□□ -1.15
HCFC2-204ENST00000550335 THNSL2Q86YJ6 484 aa7.89□□□□□ -1.15
HCFC2-204ENST00000550335 PRPF38AQ8NAV1 312 aaKnown RBP7.89□□□□□ -1.15
HCFC2-204ENST00000550335 ATL2Q8NHH9 583 aa7.89□□□□□ -1.15
HCFC2-204ENST00000550335 FBLIM1Q8WUP2 373 aa7.89□□□□□ -1.15
HCFC2-204ENST00000550335 STAG1Q8WVM7 1258 aa7.89□□□□□ -1.15
HCFC2-204ENST00000550335 PCDHB12Q9Y5F1 795 aa7.89□□□□□ -1.15
HCFC2-204ENST00000550335 A0A087X0B3 334 aa7.88□□□□□ -1.15
HCFC2-204ENST00000550335 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.88□□□□□ -1.15
HCFC2-204ENST00000550335 RBAK-RBAKDNI3L0D1 243 aa7.88□□□□□ -1.15
HCFC2-204ENST00000550335 MEIS1O00470 390 aa7.88□□□□□ -1.15
HCFC2-204ENST00000550335 RFPL3O75679 317 aa7.88□□□□□ -1.15
HCFC2-204ENST00000550335 PARNO95453 639 aaKnown RBP7.88□□□□□ -1.15
HCFC2-204ENST00000550335 STAT3P40763 770 aa7.88□□□□□ -1.15
HCFC2-204ENST00000550335 CDPF1Q6NVV7 123 aa7.88□□□□□ -1.15
HCFC2-204ENST00000550335 POMZP3Q6PJE2 187 aa7.88□□□□□ -1.15
HCFC2-204ENST00000550335 LINC00114Q6XXX2 140 aa7.88□□□□□ -1.15
HCFC2-204ENST00000550335 DDX42Q86XP3 938 aaKnown RBP eCLIP7.88□□□□□ -1.15
HCFC2-204ENST00000550335 LEO1Q8WVC0 666 aaPredicted RBP7.88□□□□□ -1.15
HCFC2-204ENST00000550335 DSCC1Q9BVC3 393 aa7.88□□□□□ -1.15
HCFC2-204ENST00000550335 IRF2BPLQ9H1B7 796 aa7.88□□□□□ -1.15
HCFC2-204ENST00000550335 GSX1Q9H4S2 264 aaPredicted RBP7.88□□□□□ -1.15
HCFC2-204ENST00000550335 AKTIPQ9H8T0 292 aa7.88□□□□□ -1.15
HCFC2-204ENST00000550335 TPX2Q9ULW0 747 aaKnown RBP7.88□□□□□ -1.15
HCFC2-204ENST00000550335 GNB5O14775 395 aa7.87□□□□□ -1.15
HCFC2-204ENST00000550335 LRRN2O75325 713 aa7.87□□□□□ -1.15
HCFC2-204ENST00000550335 VAMP4O75379 141 aa7.87□□□□□ -1.15
HCFC2-204ENST00000550335 SLITRK5O94991 958 aa7.87□□□□□ -1.15
HCFC2-204ENST00000550335 FGFR1P11362 822 aa7.87□□□□□ -1.15
HCFC2-204ENST00000550335 CDKN1CP49918 316 aaPredicted RBP7.87□□□□□ -1.15
HCFC2-204ENST00000550335 NEK4P51957 841 aa7.87□□□□□ -1.15
HCFC2-204ENST00000550335 SF1Q15637 639 aaKnown RBP7.87□□□□□ -1.15
HCFC2-204ENST00000550335 ANKRD39Q53RE8 183 aa7.87□□□□□ -1.15
HCFC2-204ENST00000550335 ZNF385CQ66K41 422 aaPredicted RBP7.87□□□□□ -1.15
HCFC2-204ENST00000550335 CRACR2BQ8N4Y2 399 aaPredicted RBP7.87□□□□□ -1.15
HCFC2-204ENST00000550335 ZNF513Q8N8E2 541 aaPredicted RBP7.87□□□□□ -1.15
HCFC2-204ENST00000550335 DNAJB8Q8NHS0 232 aa7.87□□□□□ -1.15
HCFC2-204ENST00000550335 OSBP2Q969R2 916 aa7.87□□□□□ -1.15
HCFC2-204ENST00000550335 ZDHHC15Q96MV8 337 aa7.87□□□□□ -1.15
HCFC2-204ENST00000550335 TARS2Q9BW92 718 aaKnown RBP7.87□□□□□ -1.15
HCFC2-204ENST00000550335 YIPF2Q9BWQ6 316 aa7.87□□□□□ -1.15
HCFC2-204ENST00000550335 SFMBT1Q9UHJ3 866 aa7.87□□□□□ -1.15
HCFC2-204ENST00000550335 MKL2Q9ULH7 1088 aa7.87□□□□□ -1.15
HCFC2-204ENST00000550335 SNRPB2P08579 225 aaKnown RBP7.86□□□□□ -1.15
HCFC2-204ENST00000550335 ETV3P41162 512 aa7.86□□□□□ -1.15
HCFC2-204ENST00000550335 ECI1P42126 302 aa7.86□□□□□ -1.15
HCFC2-204ENST00000550335 ZNF445P59923 1031 aa7.86□□□□□ -1.15
HCFC2-204ENST00000550335 DPY19L1Q2PZI1 675 aa7.86□□□□□ -1.15
HCFC2-204ENST00000550335 WWC2Q6AWC2 1192 aa7.86□□□□□ -1.15
HCFC2-204ENST00000550335 LRRTM3Q86VH5 581 aa7.86□□□□□ -1.15
HCFC2-204ENST00000550335 JDP2Q8WYK2 163 aa7.86□□□□□ -1.15
HCFC2-204ENST00000550335 POLR3GLQ9BT43 218 aa7.86□□□□□ -1.15
HCFC2-204ENST00000550335 MRPL4Q9BYD3 311 aaKnown RBP7.86□□□□□ -1.15
HCFC2-204ENST00000550335 CEP41Q9BYV8 373 aa7.86□□□□□ -1.15
HCFC2-204ENST00000550335 PRDM14Q9GZV8 571 aa7.86□□□□□ -1.15
HCFC2-204ENST00000550335 ACSS3Q9H6R3 686 aa7.86□□□□□ -1.15
HCFC2-204ENST00000550335 GFOD1Q9NXC2 390 aa7.86□□□□□ -1.15
HCFC2-204ENST00000550335 MCM8Q9UJA3 840 aa7.86□□□□□ -1.15
HCFC2-204ENST00000550335 EMC9Q9Y3B6 208 aa7.86□□□□□ -1.15
HCFC2-204ENST00000550335 KRBA1A5PL33 1030 aa7.85□□□□□ -1.15
HCFC2-204ENST00000550335 PIK3R2O00459 728 aa7.85□□□□□ -1.15
HCFC2-204ENST00000550335 OPA1O60313 960 aa7.85□□□□□ -1.15
HCFC2-204ENST00000550335 CDK5R2Q13319 367 aa7.85□□□□□ -1.15
HCFC2-204ENST00000550335 SNW1Q13573 536 aaKnown RBP7.85□□□□□ -1.15
HCFC2-204ENST00000550335 NFKBIBQ15653 356 aa7.85□□□□□ -1.15
HCFC2-204ENST00000550335 NBPF9Q3BBW0 867 aa7.85□□□□□ -1.15
HCFC2-204ENST00000550335 SGO2Q562F6 1265 aa7.85□□□□□ -1.15
HCFC2-204ENST00000550335 GTF2IRD2BQ6EKJ0 949 aa7.85□□□□□ -1.15
HCFC2-204ENST00000550335 GTF2IRD2Q86UP8 949 aa7.85□□□□□ -1.15
HCFC2-204ENST00000550335 TRIM59Q8IWR1 403 aa7.85□□□□□ -1.15
HCFC2-204ENST00000550335 FIBCD1Q8N539 461 aa7.85□□□□□ -1.15
HCFC2-204ENST00000550335 TOP6BLQ8N6T0 577 aa7.85□□□□□ -1.15
HCFC2-204ENST00000550335 MRGPRX3Q96LB0 322 aa7.85□□□□□ -1.15
HCFC2-204ENST00000550335 SEMA6CQ9H3T2 930 aa7.85□□□□□ -1.15
HCFC2-204ENST00000550335 PRDM10Q9NQV6 1147 aa7.85□□□□□ -1.15
HCFC2-204ENST00000550335 CHPF2Q9P2E5 772 aa7.85□□□□□ -1.15
HCFC2-204ENST00000550335 CGGBP1Q9UFW8 167 aaPredicted RBP7.85□□□□□ -1.15
HCFC2-204ENST00000550335 SHOXO15266 292 aa7.84□□□□□ -1.15
HCFC2-204ENST00000550335 DYNC1LI2O43237 492 aaPredicted RBP7.84□□□□□ -1.15
HCFC2-204ENST00000550335 DLX3O60479 287 aa7.84□□□□□ -1.15
HCFC2-204ENST00000550335 CBX7O95931 251 aa7.84□□□□□ -1.15
HCFC2-204ENST00000550335 IREB2P48200 963 aaKnown RBP7.84□□□□□ -1.15
HCFC2-204ENST00000550335 ODR4Q5SWX8 454 aa7.84□□□□□ -1.15
HCFC2-204ENST00000550335 DDX46Q7L014 1031 aaKnown RBP7.84□□□□□ -1.15
HCFC2-204ENST00000550335 TMEM130Q8N3G9 435 aa7.84□□□□□ -1.15
HCFC2-204ENST00000550335 ARHGEF39Q8N4T4 335 aa7.84□□□□□ -1.15
HCFC2-204ENST00000550335 SLC7A14Q8TBB6 771 aa7.84□□□□□ -1.15
HCFC2-204ENST00000550335 RNF141Q8WVD5 230 aa7.84□□□□□ -1.15
HCFC2-204ENST00000550335 KCTD13Q8WZ19 329 aa7.84□□□□□ -1.15
HCFC2-204ENST00000550335 RCC1LQ96I51 464 aaKnown RBP7.84□□□□□ -1.15
HCFC2-204ENST00000550335 KCNF1Q9H3M0 494 aa7.84□□□□□ -1.15
HCFC2-204ENST00000550335 SLC52A2Q9HAB3 445 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms