RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 FASTKD5Q7L8L6 764 aaKnown RBP10.5□□□□□ -0.73
CACNB3-215ENST00000550190 PRRT2Q7Z6L0 340 aaPredicted RBP10.5□□□□□ -0.73
CACNB3-215ENST00000550190 FBXL16Q8N461 479 aa10.5□□□□□ -0.73
CACNB3-215ENST00000550190 DCAF4Q8WV16 495 aa10.5□□□□□ -0.73
CACNB3-215ENST00000550190 ZNF274Q96GC6 653 aaPredicted RBP10.5□□□□□ -0.73
CACNB3-215ENST00000550190 HHIPL1Q96JK4 782 aa10.5□□□□□ -0.73
CACNB3-215ENST00000550190 CAPNS2Q96L46 248 aa10.5□□□□□ -0.73
CACNB3-215ENST00000550190 TANGO6Q9C0B7 1094 aa10.5□□□□□ -0.73
CACNB3-215ENST00000550190 RPAP3Q9H6T3 665 aaPredicted RBP10.5□□□□□ -0.73
CACNB3-215ENST00000550190 SYNPO2Q9UMS6 1093 aa10.5□□□□□ -0.73
CACNB3-215ENST00000550190 MYH6P13533 1939 aa10.5□□□□□ -0.73
CACNB3-215ENST00000550190 MANSC4A6NHS7 340 aaPredicted RBP10.49□□□□□ -0.73
CACNB3-215ENST00000550190 TMEM232C9JQI7 657 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 WDR46O15213 610 aaKnown RBP10.49□□□□□ -0.73
CACNB3-215ENST00000550190 DHX16O60231 1041 aaKnown RBP10.49□□□□□ -0.73
CACNB3-215ENST00000550190 AOC2O75106 756 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 LARGE1O95461 756 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 HSPA6P17066 643 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 VCAM1P19320 739 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 MCM2P49736 904 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 KIF23Q02241 960 aaPredicted RBP10.49□□□□□ -0.73
CACNB3-215ENST00000550190 TROAPQ12815 778 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 GRM4Q14833 912 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 ME3Q16798 604 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 RTN1Q16799 776 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 TREML2Q5T2D2 321 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 TTBK2Q6IQ55 1244 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 HSCBQ8IWL3 235 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 STAG2Q8N3U4 1231 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 NECAB1Q8N987 351 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 FANCBQ8NB91 859 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 IL27Q8NEV9 243 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 LPAR1Q92633 364 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 ZSCAN31Q96LW9 406 aaPredicted RBP10.49□□□□□ -0.73
CACNB3-215ENST00000550190 VAT1LQ9HCJ6 419 aa10.49□□□□□ -0.73
CACNB3-215ENST00000550190 BAZ2BQ9UIF8 2168 aaKnown RBP10.48□□□□□ -0.73
CACNB3-215ENST00000550190 USP17L15C9J2P7 530 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 USP17L13C9JLJ4 530 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 USP17L11C9JVI0 530 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 KLRF2D3W0D1 207 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 USP17L18D6R9N7 530 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 USP17L22D6RA61 530 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 USP17L17D6RBQ6 530 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 USP17L19D6RCP7 530 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 USP17L20D6RJB6 530 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 CDC27P30260 824 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 KIF5BP33176 963 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 ADD1P35611 737 aaKnown RBP10.48□□□□□ -0.73
CACNB3-215ENST00000550190 SLC16A2P36021 539 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 ANP32AP39687 249 aaKnown RBP10.48□□□□□ -0.73
CACNB3-215ENST00000550190 EVCP57679 992 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 ZNF543Q08ER8 600 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 USP17L24Q0WX57 530 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 ASPRV1Q53RT3 343 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 GPATCH4Q5T3I0 446 aaKnown RBP10.48□□□□□ -0.73
CACNB3-215ENST00000550190 CCDC83Q8IWF9 413 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 CMTR1Q8N1G2 835 aaKnown RBP10.48□□□□□ -0.73
CACNB3-215ENST00000550190 CCDC82Q8N4S0 544 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 PROCA1Q8NCQ7 364 aaPredicted RBP10.48□□□□□ -0.73
CACNB3-215ENST00000550190 PIBF1Q8WXW3 757 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 BRI3BPQ8WY22 251 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 KIFC2Q96AC6 838 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 GMCL1Q96IK5 515 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 MS4A4AQ96JQ5 239 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 C12orf42Q96LP6 360 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 ZIC5Q96T25 663 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 UBA5Q9GZZ9 404 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 CPVLQ9H3G5 476 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 NCOA5Q9HCD5 579 aaKnown RBP10.48□□□□□ -0.73
CACNB3-215ENST00000550190 RBM28Q9NW13 759 aaKnown RBP10.48□□□□□ -0.73
CACNB3-215ENST00000550190 MAD2L2Q9UI95 211 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 HPS5Q9UPZ3 1129 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 PARP14Q460N5 1801 aa10.48□□□□□ -0.73
CACNB3-215ENST00000550190 WDR33Q9C0J8 1336 aaKnown RBP10.48□□□□□ -0.73
CACNB3-215ENST00000550190 COL11A1P12107 1806 aaPredicted RBP10.47□□□□□ -0.73
CACNB3-215ENST00000550190 CCDC196A0A1B0GTZ2 297 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 PALM3A6NDB9 673 aaPredicted RBP10.47□□□□□ -0.73
CACNB3-215ENST00000550190 CPLX1O14810 134 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 PFKFB2O60825 505 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 DTNBO60941 627 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 FLOT1O75955 427 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 PLEKHA8P1O95397 391 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 SNHG28P0DPA3 235 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 OSBPP22059 807 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 VEGFBP49765 207 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 GNAQP50148 359 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 STAT2P52630 851 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 IRX3P78415 501 aaPredicted RBP10.47□□□□□ -0.73
CACNB3-215ENST00000550190 SCRN1Q12765 414 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 SREBF2Q12772 1141 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 NOGQ13253 232 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 PABPC4Q13310 644 aaKnown RBP eCLIP10.47□□□□□ -0.73
CACNB3-215ENST00000550190 MOGSQ13724 837 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 GPAT2Q6NUI2 795 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 CATSPERGQ6ZRH7 1159 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 CHURC1Q8WUH1 139 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 SNX21Q969T3 373 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 TMX3Q96JJ7 454 aa10.47□□□□□ -0.73
CACNB3-215ENST00000550190 IPO9Q96P70 1041 aaKnown RBP10.47□□□□□ -0.73
CACNB3-215ENST00000550190 MAP3K14Q99558 947 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms