RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 PARP14Q460N5 1801 aa11.9□□□□□ -0.5
TRAFD1-207ENST00000550051 MYH8P13535 1937 aa11.9□□□□□ -0.5
TRAFD1-207ENST00000550051 TRIM43BA6NCK2 446 aa11.9□□□□□ -0.5
TRAFD1-207ENST00000550051 CYP2D6P10635 497 aa11.9□□□□□ -0.5
TRAFD1-207ENST00000550051 PLS1Q14651 629 aa11.9□□□□□ -0.5
TRAFD1-207ENST00000550051 TMEM132BQ14DG7 1078 aa11.9□□□□□ -0.5
TRAFD1-207ENST00000550051 C9orf50Q5SZB4 431 aa11.9□□□□□ -0.5
TRAFD1-207ENST00000550051 C12orf60Q5U649 245 aa11.9□□□□□ -0.5
TRAFD1-207ENST00000550051 ANO1Q5XXA6 986 aa11.9□□□□□ -0.5
TRAFD1-207ENST00000550051 NCAPG2Q86XI2 1143 aa11.9□□□□□ -0.5
TRAFD1-207ENST00000550051 LCORLQ8N3X6 602 aa11.9□□□□□ -0.5
TRAFD1-207ENST00000550051 SLC44A5Q8NCS7 719 aa11.9□□□□□ -0.5
TRAFD1-207ENST00000550051 TRIM43Q96BQ3 446 aaPredicted RBP11.9□□□□□ -0.5
TRAFD1-207ENST00000550051 ATG4CQ96DT6 458 aa11.9□□□□□ -0.5
TRAFD1-207ENST00000550051 IL1RAPL2Q9NP60 686 aa11.9□□□□□ -0.5
TRAFD1-207ENST00000550051 PDLIM7Q9NR12 457 aa11.9□□□□□ -0.5
TRAFD1-207ENST00000550051 GOLIM4O00461 696 aa11.89□□□□□ -0.51
TRAFD1-207ENST00000550051 WDR46O15213 610 aaKnown RBP11.89□□□□□ -0.51
TRAFD1-207ENST00000550051 PRR29P0C7W0 189 aa11.89□□□□□ -0.51
TRAFD1-207ENST00000550051 AKR1B1P15121 316 aa11.89□□□□□ -0.51
TRAFD1-207ENST00000550051 TLE2Q04725 743 aa11.89□□□□□ -0.51
TRAFD1-207ENST00000550051 SH3RF1Q7Z6J0 888 aa11.89□□□□□ -0.51
TRAFD1-207ENST00000550051 RIOX2Q8IUF8 465 aa11.89□□□□□ -0.51
TRAFD1-207ENST00000550051 RPAP2Q8IXW5 612 aaPredicted RBP11.89□□□□□ -0.51
TRAFD1-207ENST00000550051 KIF1BPQ96EK5 621 aa11.89□□□□□ -0.51
TRAFD1-207ENST00000550051 DYNLL2Q96FJ2 89 aa11.89□□□□□ -0.51
TRAFD1-207ENST00000550051 XPNPEP3Q9NQH7 507 aa11.89□□□□□ -0.51
TRAFD1-207ENST00000550051 PRDM5Q9NQX1 630 aaPredicted RBP11.89□□□□□ -0.51
TRAFD1-207ENST00000550051 COL11A1P12107 1806 aaPredicted RBP11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 BAZ2AQ9UIF9 1905 aaKnown RBP11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 KIAA0355O15063 1070 aa11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 IFIT2P09913 472 aaKnown RBP11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 RARBP10826 455 aa11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 ADD2P35612 726 aa11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 CDK8P49336 464 aa11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 ICA1Q05084 483 aa11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 ZNF792Q3KQV3 632 aa11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 FAM47AQ5JRC9 791 aa11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 RNF180Q86T96 592 aa11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 SPICE1Q8N0Z3 855 aa11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 FERMT2Q96AC1 680 aa11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 MMP19Q99542 508 aa11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 TINF2Q9BSI4 451 aa11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 TSEN34Q9BSV6 310 aaKnown RBP11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 ARMT1Q9H993 441 aa11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 KANSL2Q9H9L4 492 aa11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 PLXNA1Q9UIW2 1896 aa11.88□□□□□ -0.51
TRAFD1-207ENST00000550051 TMEM265A0A087WTH1 108 aa11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 USP17L12C9JPN9 530 aa11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 USP17L21D6R901 530 aa11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 VWA5AO00534 786 aa11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 PRKAB2O43741 272 aa11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 RAB11FIP3O75154 756 aa11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 EEF2P13639 858 aaKnown RBP11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 ATP5JP18859 108 aa11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 ITGB8P26012 769 aa11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 COPB2P35606 906 aa11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 STAT3P40763 770 aa11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 KCTD2Q14681 263 aa11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 C16orf86Q6ZW13 317 aa11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 MSL3Q8N5Y2 521 aaKnown RBP11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 TOX2Q96NM4 488 aa11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 TTYH1Q9H313 450 aaPredicted RBP11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 PAG1Q9NWQ8 432 aa11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 ZNF214Q9UL59 606 aaPredicted RBP11.87□□□□□ -0.51
TRAFD1-207ENST00000550051 PGK2P07205 417 aa11.86□□□□□ -0.51
TRAFD1-207ENST00000550051 CLTBP09497 229 aa11.86□□□□□ -0.51
TRAFD1-207ENST00000550051 ZNF865P0CJ78 1059 aaPredicted RBP11.86□□□□□ -0.51
TRAFD1-207ENST00000550051 MS4A1P11836 297 aa11.86□□□□□ -0.51
TRAFD1-207ENST00000550051 UBE3CQ15386 1083 aa11.86□□□□□ -0.51
TRAFD1-207ENST00000550051 ANKRD33Q7Z3H0 272 aa11.86□□□□□ -0.51
TRAFD1-207ENST00000550051 CLEC10AQ8IUN9 316 aa11.86□□□□□ -0.51
TRAFD1-207ENST00000550051 SIRT2Q8IXJ6 389 aa11.86□□□□□ -0.51
TRAFD1-207ENST00000550051 AMOTL1Q8IY63 956 aa11.86□□□□□ -0.51
TRAFD1-207ENST00000550051 REPS2Q8NFH8 660 aa11.86□□□□□ -0.51
TRAFD1-207ENST00000550051 MAFAQ8NHW3 353 aaPredicted RBP11.86□□□□□ -0.51
TRAFD1-207ENST00000550051 PANK1Q8TE04 598 aa11.86□□□□□ -0.51
TRAFD1-207ENST00000550051 DNAJC2Q99543 621 aaKnown RBP11.86□□□□□ -0.51
TRAFD1-207ENST00000550051 HAUS7Q99871 368 aa11.86□□□□□ -0.51
TRAFD1-207ENST00000550051 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.86□□□□□ -0.518e-7■■■■■ 37.5
TRAFD1-207ENST00000550051 FBXO28Q9NVF7 368 aa11.86□□□□□ -0.51
TRAFD1-207ENST00000550051 PPP1R9AQ9ULJ8 1098 aa11.86□□□□□ -0.51
TRAFD1-207ENST00000550051 ROBO3Q96MS0 1386 aa11.86□□□□□ -0.51
TRAFD1-207ENST00000550051 CYP2D7A0A087X1C5 515 aa11.85□□□□□ -0.51
TRAFD1-207ENST00000550051 A0A1W2PQ45 241 aaPredicted RBP11.85□□□□□ -0.51
TRAFD1-207ENST00000550051 A0A1W2PQY0 241 aa11.85□□□□□ -0.51
TRAFD1-207ENST00000550051 SMIM22K7EJ46 135 aa11.85□□□□□ -0.51
TRAFD1-207ENST00000550051 ADAMTS4O75173 837 aa11.85□□□□□ -0.51
TRAFD1-207ENST00000550051 HMMRO75330 724 aa11.85□□□□□ -0.51
TRAFD1-207ENST00000550051 MBD4O95243 580 aa11.85□□□□□ -0.51
TRAFD1-207ENST00000550051 PGK1P00558 417 aa11.85□□□□□ -0.51
TRAFD1-207ENST00000550051 AKR1A1P14550 325 aa11.85□□□□□ -0.51
TRAFD1-207ENST00000550051 RAG1P15918 1043 aa11.85□□□□□ -0.51
TRAFD1-207ENST00000550051 TAL1P17542 331 aaPredicted RBP11.85□□□□□ -0.51
TRAFD1-207ENST00000550051 EPHB4P54760 987 aa11.85□□□□□ -0.51
TRAFD1-207ENST00000550051 FAAP100Q0VG06 881 aa11.85□□□□□ -0.51
TRAFD1-207ENST00000550051 SLFNL1Q499Z3 407 aa11.85□□□□□ -0.51
TRAFD1-207ENST00000550051 MAMDC4Q6UXC1 1216 aa11.85□□□□□ -0.51
TRAFD1-207ENST00000550051 KLHDC9Q8NEP7 349 aa11.85□□□□□ -0.51
TRAFD1-207ENST00000550051 DDRGK1Q96HY6 314 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms