RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 MORC3Q14149 939 aa11.43□□□□□ -0.58
RAB5B-206ENST00000549505 E2F4Q16254 413 aa11.43□□□□□ -0.58
RAB5B-206ENST00000549505 TEKT1Q969V4 418 aa11.43□□□□□ -0.58
RAB5B-206ENST00000549505 DDX4Q9NQI0 724 aaKnown RBP11.43□□□□□ -0.58
RAB5B-206ENST00000549505 IMPACTQ9P2X3 320 aa11.43□□□□□ -0.58
RAB5B-206ENST00000549505 NEMFO60524 1076 aa11.42□□□□□ -0.58
RAB5B-206ENST00000549505 KCNJ6P48051 423 aa11.42□□□□□ -0.58
RAB5B-206ENST00000549505 LONRF3Q496Y0 759 aa11.42□□□□□ -0.58
RAB5B-206ENST00000549505 FOXP4Q8IVH2 680 aaPredicted RBP11.42□□□□□ -0.58
RAB5B-206ENST00000549505 CABP5Q9NP86 173 aa11.42□□□□□ -0.58
RAB5B-206ENST00000549505 USP17L3A6NCW0 530 aa11.42□□□□□ -0.58
RAB5B-206ENST00000549505 USP17L4A6NCW7 530 aa11.42□□□□□ -0.58
RAB5B-206ENST00000549505 ENTPD3O75355 529 aa11.42□□□□□ -0.58
RAB5B-206ENST00000549505 SLFN14P0C7P3 912 aa11.42□□□□□ -0.58
RAB5B-206ENST00000549505 MARCKSP29966 332 aaPredicted RBP11.42□□□□□ -0.58
RAB5B-206ENST00000549505 HOXA7P31268 230 aaPredicted RBP11.42□□□□□ -0.58
RAB5B-206ENST00000549505 LONP1P36776 959 aaKnown RBP11.42□□□□□ -0.58
RAB5B-206ENST00000549505 TTC38Q5R3I4 469 aa11.42□□□□□ -0.58
RAB5B-206ENST00000549505 USP17L1Q7RTZ2 530 aa11.42□□□□□ -0.58
RAB5B-206ENST00000549505 CMTR1Q8N1G2 835 aaKnown RBP11.42□□□□□ -0.58
RAB5B-206ENST00000549505 CCDC12Q8WUD4 166 aaPredicted RBP11.42□□□□□ -0.58
RAB5B-206ENST00000549505 SDF4Q9BRK5 362 aa11.42□□□□□ -0.58
RAB5B-206ENST00000549505 SLC26A4O43511 780 aa11.42□□□□□ -0.58
RAB5B-206ENST00000549505 STAG2Q8N3U4 1231 aa11.42□□□□□ -0.58
RAB5B-206ENST00000549505 MTMR14Q8NCE2 650 aa11.42□□□□□ -0.58
RAB5B-206ENST00000549505 PCDHA6Q9UN73 950 aa11.42□□□□□ -0.58
RAB5B-206ENST00000549505 PCDHA8Q9Y5H6 950 aa11.42□□□□□ -0.58
RAB5B-206ENST00000549505 MYL1P05976 194 aa11.41□□□□□ -0.58
RAB5B-206ENST00000549505 MSNP26038 577 aaKnown RBP11.41□□□□□ -0.58
RAB5B-206ENST00000549505 CRKP46108 304 aa11.41□□□□□ -0.58
RAB5B-206ENST00000549505 WWC2Q6AWC2 1192 aa11.41□□□□□ -0.58
RAB5B-206ENST00000549505 MLKLQ8NB16 471 aa11.41□□□□□ -0.58
RAB5B-206ENST00000549505 CLIC6Q96NY7 704 aa11.41□□□□□ -0.58
RAB5B-206ENST00000549505 JAG2Q9Y219 1238 aa11.41□□□□□ -0.58
RAB5B-206ENST00000549505 PDHBP11177 359 aa11.41□□□□□ -0.58
RAB5B-206ENST00000549505 DPCR1Q3MIW9 517 aa11.41□□□□□ -0.58
RAB5B-206ENST00000549505 KIAA1524Q8TCG1 905 aa11.41□□□□□ -0.58
RAB5B-206ENST00000549505 CEP95Q96GE4 821 aa11.41□□□□□ -0.58
RAB5B-206ENST00000549505 CSRNP2Q9H175 543 aa11.41□□□□□ -0.58
RAB5B-206ENST00000549505 TMX4Q9H1E5 349 aaPredicted RBP11.41□□□□□ -0.58
RAB5B-206ENST00000549505 KCNF1Q9H3M0 494 aa11.41□□□□□ -0.58
RAB5B-206ENST00000549505 STK32BQ9NY57 414 aa11.41□□□□□ -0.58
RAB5B-206ENST00000549505 NYAP2Q9P242 653 aa11.41□□□□□ -0.58
RAB5B-206ENST00000549505 SERPINB13Q9UIV8 391 aa11.41□□□□□ -0.58
RAB5B-206ENST00000549505 TTF2Q9UNY4 1162 aaKnown RBP11.41□□□□□ -0.58
RAB5B-206ENST00000549505 PARP1P09874 1014 aaKnown RBP11.4□□□□□ -0.58
RAB5B-206ENST00000549505 ERCC5P28715 1186 aaPredicted RBP11.4□□□□□ -0.58
RAB5B-206ENST00000549505 FKBP1CQ5VVH2 108 aa11.4□□□□□ -0.58
RAB5B-206ENST00000549505 TYW1BQ6NUM6 668 aa11.4□□□□□ -0.58
RAB5B-206ENST00000549505 SLC44A5Q8NCS7 719 aa11.4□□□□□ -0.58
RAB5B-206ENST00000549505 GMLQ99445 158 aa11.4□□□□□ -0.58
RAB5B-206ENST00000549505 CLK2P49760 499 aaKnown RBP11.4□□□□□ -0.58
RAB5B-206ENST00000549505 POSTNQ15063 836 aa11.4□□□□□ -0.58
RAB5B-206ENST00000549505 MAGEF1Q9HAY2 307 aa11.4□□□□□ -0.58
RAB5B-206ENST00000549505 USP40Q9NVE5 1235 aa11.4□□□□□ -0.58
RAB5B-206ENST00000549505 KLRF2D3W0D1 207 aa11.4□□□□□ -0.59
RAB5B-206ENST00000549505 WNT7AO00755 349 aa11.4□□□□□ -0.59
RAB5B-206ENST00000549505 ECE2O60344 883 aa11.4□□□□□ -0.59
RAB5B-206ENST00000549505 TTLL1O95922 423 aa11.4□□□□□ -0.59
RAB5B-206ENST00000549505 GRIN1Q05586 938 aa11.4□□□□□ -0.59
RAB5B-206ENST00000549505 IL17AQ16552 155 aa11.4□□□□□ -0.59
RAB5B-206ENST00000549505 POTEAQ6S8J7 498 aa11.4□□□□□ -0.59
RAB5B-206ENST00000549505 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.4□□□□□ -0.59
RAB5B-206ENST00000549505 KRT25Q7Z3Z0 450 aa11.4□□□□□ -0.59
RAB5B-206ENST00000549505 ENOX1Q8TC92 643 aaKnown RBP11.4□□□□□ -0.59
RAB5B-206ENST00000549505 GSDMAQ96QA5 445 aa11.4□□□□□ -0.59
RAB5B-206ENST00000549505 CCSER1Q9C0I3 900 aa11.4□□□□□ -0.59
RAB5B-206ENST00000549505 FER1L6Q2WGJ9 1857 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 ZNF18P17022 549 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 BMP6P22004 513 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 NLRP5P59047 1200 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 MAP3K10Q02779 954 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 PDXDC2PQ6P474 469 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 GMCL1P1Q8NEA9 526 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 FAM198AQ9UFP1 575 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 SAP30BPQ9UHR5 308 aaKnown RBP11.39□□□□□ -0.59
RAB5B-206ENST00000549505 MYH4Q9Y623 1939 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 FAM205CA6NFA0 338 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 VEGFAP15692 232 aaPredicted RBP11.39□□□□□ -0.59
RAB5B-206ENST00000549505 KCNA3P22001 575 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 ZNF543Q08ER8 600 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 DPYDQ12882 1025 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 COBLL1Q53SF7 1204 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 GPATCH4Q5T3I0 446 aaKnown RBP11.39□□□□□ -0.59
RAB5B-206ENST00000549505 CNNM4Q6P4Q7 775 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 RTKN2Q8IZC4 609 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 CNNM3Q8NE01 707 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 ZBED3Q96IU2 234 aaPredicted RBP11.39□□□□□ -0.59
RAB5B-206ENST00000549505 AK8Q96MA6 479 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 CUEDC2Q9H467 287 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 MAN1B1Q9UKM7 699 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 COL4A5P29400 1685 aa11.39□□□□□ -0.59
RAB5B-206ENST00000549505 GOLGA6L19H0YKK7 550 aa11.38□□□□□ -0.59
RAB5B-206ENST00000549505 DCAF4Q8WV16 495 aa11.38□□□□□ -0.59
RAB5B-206ENST00000549505 CCDC34Q96HJ3 373 aa11.38□□□□□ -0.59
RAB5B-206ENST00000549505 GTPBP4Q9BZE4 634 aaKnown RBP11.38□□□□□ -0.59
RAB5B-206ENST00000549505 DNAJC18Q9H819 358 aa11.38□□□□□ -0.59
RAB5B-206ENST00000549505 DACH1Q9UI36 760 aa11.38□□□□□ -0.59
RAB5B-206ENST00000549505 PCDHA5Q9Y5H7 936 aa11.38□□□□□ -0.59
RAB5B-206ENST00000549505 A0A087X0B3 334 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms