RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 ATG4CQ96DT6 458 aa10.91□□□□□ -0.66
UBE2N-203ENST00000549490 CDCA7LQ96GN5 454 aa10.91□□□□□ -0.66
UBE2N-203ENST00000549490 SLC28A3Q9HAS3 691 aa10.91□□□□□ -0.66
UBE2N-203ENST00000549490 YBX2Q9Y2T7 364 aaKnown RBP10.91□□□□□ -0.66
UBE2N-203ENST00000549490 SYNRGQ9UMZ2 1314 aa10.9□□□□□ -0.66
UBE2N-203ENST00000549490 MOXD2PA6NHM9 499 aa10.9□□□□□ -0.66
UBE2N-203ENST00000549490 USP5P45974 858 aa10.9□□□□□ -0.66
UBE2N-203ENST00000549490 PLCD1P51178 756 aa10.9□□□□□ -0.66
UBE2N-203ENST00000549490 ZNF792Q3KQV3 632 aa10.9□□□□□ -0.66
UBE2N-203ENST00000549490 ALDH1L2Q3SY69 923 aa10.9□□□□□ -0.66
UBE2N-203ENST00000549490 TTC6Q86TZ1 520 aa10.9□□□□□ -0.66
UBE2N-203ENST00000549490 TMEM199Q8N511 208 aa10.9□□□□□ -0.66
UBE2N-203ENST00000549490 MIGA1Q8NAN2 632 aa10.9□□□□□ -0.66
UBE2N-203ENST00000549490 HERVK_113Q902F9 699 aa10.9□□□□□ -0.66
UBE2N-203ENST00000549490 MMP19Q99542 508 aa10.9□□□□□ -0.66
UBE2N-203ENST00000549490 PIH1D3Q9NQM4 214 aaKnown RBP10.9□□□□□ -0.66
UBE2N-203ENST00000549490 SMC4Q9NTJ3 1288 aa10.9□□□□□ -0.66
UBE2N-203ENST00000549490 MUC6Q6W4X9 2439 aa10.9□□□□□ -0.66
UBE2N-203ENST00000549490 REV3LO60673 3130 aa10.9□□□□□ -0.66
UBE2N-203ENST00000549490 ROBO3Q96MS0 1386 aa10.9□□□□□ -0.67
UBE2N-203ENST00000549490 ELP1O95163 1332 aa10.89□□□□□ -0.67
UBE2N-203ENST00000549490 MYADML2A6NDP7 307 aa10.89□□□□□ -0.67
UBE2N-203ENST00000549490 ERC2O15083 957 aa10.89□□□□□ -0.67
UBE2N-203ENST00000549490 FLOT1O75955 427 aa10.89□□□□□ -0.67
UBE2N-203ENST00000549490 SLC25A27O95847 323 aa10.89□□□□□ -0.67
UBE2N-203ENST00000549490 ZAP70P43403 619 aa10.89□□□□□ -0.67
UBE2N-203ENST00000549490 IRX5P78411 483 aaPredicted RBP10.89□□□□□ -0.67
UBE2N-203ENST00000549490 TMEM132BQ14DG7 1078 aa10.89□□□□□ -0.67
UBE2N-203ENST00000549490 TTC39AQ5SRH9 613 aa10.89□□□□□ -0.67
UBE2N-203ENST00000549490 ALYREFQ86V81 257 aaKnown RBP10.89□□□□□ -0.67
UBE2N-203ENST00000549490 PPP1R12CQ9BZL4 782 aa10.89□□□□□ -0.67
UBE2N-203ENST00000549490 IL23AQ9NPF7 189 aa10.89□□□□□ -0.67
UBE2N-203ENST00000549490 C11orf16Q9NQ32 467 aa10.89□□□□□ -0.67
UBE2N-203ENST00000549490 NOB1Q9ULX3 412 aaKnown RBP10.89□□□□□ -0.67
UBE2N-203ENST00000549490 DIS3Q9Y2L1 958 aaKnown RBP10.89□□□□□ -0.67
UBE2N-203ENST00000549490 MYO9BQ13459 2157 aa10.89□□□□□ -0.67
UBE2N-203ENST00000549490 MROH7Q68CQ1 1323 aa10.88□□□□□ -0.67
UBE2N-203ENST00000549490 APBB1O00213 710 aa10.88□□□□□ -0.67
UBE2N-203ENST00000549490 IGSF3O75054 1194 aa10.88□□□□□ -0.67
UBE2N-203ENST00000549490 FGBP02675 491 aa10.88□□□□□ -0.67
UBE2N-203ENST00000549490 CYP2C18P33260 490 aa10.88□□□□□ -0.67
UBE2N-203ENST00000549490 RABGGTBP53611 331 aa10.88□□□□□ -0.67
UBE2N-203ENST00000549490 GABPAQ06546 454 aa10.88□□□□□ -0.67
UBE2N-203ENST00000549490 G3BP1Q13283 466 aaKnown RBP eCLIP10.88□□□□□ -0.673e-9■■■□□ 17.9
UBE2N-203ENST00000549490 SKIV2LQ15477 1246 aaKnown RBP10.88□□□□□ -0.67
UBE2N-203ENST00000549490 SAMD1Q6SPF0 538 aaPredicted RBP10.88□□□□□ -0.67
UBE2N-203ENST00000549490 KHSRPQ92945 711 aaKnown RBP eCLIP10.88□□□□□ -0.677e-7■□□□□ 11.2
UBE2N-203ENST00000549490 GLT1D1Q96MS3 346 aa10.88□□□□□ -0.67
UBE2N-203ENST00000549490 DBNDD2Q9BQY9 259 aa10.88□□□□□ -0.67
UBE2N-203ENST00000549490 FAM184BQ9ULE4 1060 aa10.88□□□□□ -0.67
UBE2N-203ENST00000549490 CNPY2Q9Y2B0 182 aa10.88□□□□□ -0.67
UBE2N-203ENST00000549490 E9PSI1 815 aa10.87□□□□□ -0.67
UBE2N-203ENST00000549490 ARVCFO00192 962 aa10.87□□□□□ -0.67
UBE2N-203ENST00000549490 MPHOSPH10O00566 681 aaKnown RBP10.87□□□□□ -0.67
UBE2N-203ENST00000549490 TLL1O43897 1013 aa10.87□□□□□ -0.67
UBE2N-203ENST00000549490 GPR37L1O60883 481 aa10.87□□□□□ -0.67
UBE2N-203ENST00000549490 MYOGP15173 224 aa10.87□□□□□ -0.67
UBE2N-203ENST00000549490 EVX2Q03828 476 aa10.87□□□□□ -0.67
UBE2N-203ENST00000549490 KCTD2Q14681 263 aa10.87□□□□□ -0.67
UBE2N-203ENST00000549490 CCDC158Q5M9N0 1113 aa10.87□□□□□ -0.67
UBE2N-203ENST00000549490 PPP2R2DQ66LE6 453 aa10.87□□□□□ -0.67
UBE2N-203ENST00000549490 OTOP2Q7RTS6 562 aa10.87□□□□□ -0.67
UBE2N-203ENST00000549490 CERS3Q8IU89 383 aa10.87□□□□□ -0.67
UBE2N-203ENST00000549490 RIOX2Q8IUF8 465 aa10.87□□□□□ -0.67
UBE2N-203ENST00000549490 SIAH1Q8IUQ4 282 aa10.87□□□□□ -0.67
UBE2N-203ENST00000549490 FAM126BQ8IXS8 530 aa10.87□□□□□ -0.67
UBE2N-203ENST00000549490 SPICE1Q8N0Z3 855 aa10.87□□□□□ -0.67
UBE2N-203ENST00000549490 VTI1AQ96AJ9 217 aa10.87□□□□□ -0.67
UBE2N-203ENST00000549490 ZNF512BQ96KM6 892 aaPredicted RBP10.87□□□□□ -0.67
UBE2N-203ENST00000549490 API5Q9BZZ5 524 aaKnown RBP10.87□□□□□ -0.67
UBE2N-203ENST00000549490 MTIF3Q9H2K0 278 aaKnown RBP10.87□□□□□ -0.67
UBE2N-203ENST00000549490 TRANK1O15050 2925 aa10.87□□□□□ -0.67
UBE2N-203ENST00000549490 PNMA6EA0A0J9YXQ4 647 aa10.86□□□□□ -0.67
UBE2N-203ENST00000549490 A0A0U1RQG5 324 aaPredicted RBP10.86□□□□□ -0.67
UBE2N-203ENST00000549490 FAM86C2PA6NEL3 165 aa10.86□□□□□ -0.67
UBE2N-203ENST00000549490 DUSP11O75319 330 aaKnown RBP10.86□□□□□ -0.67
UBE2N-203ENST00000549490 IDH1O75874 414 aaKnown RBP10.86□□□□□ -0.67
UBE2N-203ENST00000549490 SNAI1O95863 264 aaPredicted RBP10.86□□□□□ -0.67
UBE2N-203ENST00000549490 CD4P01730 458 aa10.86□□□□□ -0.67
UBE2N-203ENST00000549490 ASGR1P07306 291 aa10.86□□□□□ -0.67
UBE2N-203ENST00000549490 GNAI3P08754 354 aa10.86□□□□□ -0.67
UBE2N-203ENST00000549490 CST5P28325 142 aaPredicted RBP10.86□□□□□ -0.67
UBE2N-203ENST00000549490 TNNI3KQ59H18 835 aa10.86□□□□□ -0.67
UBE2N-203ENST00000549490 FAM9BQ8IZU0 186 aa10.86□□□□□ -0.67
UBE2N-203ENST00000549490 GPR108Q9NPR9 543 aa10.86□□□□□ -0.67
UBE2N-203ENST00000549490 ADAMTS5Q9UNA0 930 aa10.86□□□□□ -0.67
UBE2N-203ENST00000549490 TMX2Q9Y320 296 aa10.86□□□□□ -0.67
UBE2N-203ENST00000549490 MTCH2Q9Y6C9 303 aa10.86□□□□□ -0.67
UBE2N-203ENST00000549490 FPGT-TNNI3KV9GXZ4 949 aa10.86□□□□□ -0.67
UBE2N-203ENST00000549490 PLXNA1Q9UIW2 1896 aa10.86□□□□□ -0.67
UBE2N-203ENST00000549490 SMCHD1A6NHR9 2005 aa10.85□□□□□ -0.67
UBE2N-203ENST00000549490 TCF20Q9UGU0 1960 aaKnown RBP10.85□□□□□ -0.67
UBE2N-203ENST00000549490 RFXAPO00287 272 aa10.85□□□□□ -0.67
UBE2N-203ENST00000549490 TLR3O15455 904 aaKnown RBP10.85□□□□□ -0.67
UBE2N-203ENST00000549490 ADCY6O43306 1168 aa10.85□□□□□ -0.67
UBE2N-203ENST00000549490 POLR3DP05423 398 aaPredicted RBP10.85□□□□□ -0.67
UBE2N-203ENST00000549490 C6orf222P0C671 652 aaPredicted RBP10.85□□□□□ -0.67
UBE2N-203ENST00000549490 POU3F3P20264 500 aaPredicted RBP10.85□□□□□ -0.67
UBE2N-203ENST00000549490 STAT3P40763 770 aa10.85□□□□□ -0.67
UBE2N-203ENST00000549490 SLFN5Q08AF3 891 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms