RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 MENTQ9BUN1 341 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 MIR1-1HGQ9H1L0 117 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 CACNA2D2Q9NY47 1150 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 CYP8B1Q9UNU6 501 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 EFR3BQ9Y2G0 817 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 DNMT1P26358 1616 aaKnown RBP3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 HECW1Q76N89 1606 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 KIAA0586Q9BVV6 1533 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 GPATCH8Q9UKJ3 1502 aaKnown RBP3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 ATP10BO94823 1461 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 ABCC10Q5T3U5 1492 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 TEX14Q8IWB6 1497 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 IFT140Q96RY7 1462 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 CILPO75339 1184 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 LMNB1P20700 586 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 MAOBP27338 520 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 SOX9P48436 509 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 SEZ6Q53EL9 994 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 REC114Q7Z4M0 266 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 VPS37DQ86XT2 251 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 SLITRK4Q8IW52 837 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 GPBAR1Q8TDU6 330 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 WNT8BQ93098 351 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 WDR89Q96FK6 387 aaPredicted RBP3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 SEC16BQ96JE7 1060 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 EMILIN2Q9BXX0 1053 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 LRRC3Q9BY71 257 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 SEMA6CQ9H3T2 930 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 CCDC86Q9H6F5 360 aaKnown RBP3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 OSGEPQ9NPF4 335 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 PPT2Q9UMR5 302 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 SAMM50Q9Y512 469 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 CDC42BPAQ5VT25 1732 aa3.29□□□□□ -1.88
DEPDC4-206ENST00000549100 SPATA31E1Q6ZUB1 1445 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 AKNAQ7Z591 1439 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 LOC100289279A0A1B0GTE1 492 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 OTOL1A6NHN0 477 aaPredicted RBP3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 ZNF862O60290 1169 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 TRIM37O94972 964 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 CYP11A1P05108 521 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 LIG1P18858 919 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 ARL4DP49703 201 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 HNRNPMP52272 730 aaKnown RBP eCLIP3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 SOX4Q06945 474 aaPredicted RBP3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 CNGB1Q14028 1251 aaPredicted RBP3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 MPP2Q14168 576 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 LRRC14Q15048 493 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 POU4F3Q15319 338 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 CCDC81Q6ZN84 652 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 CCDC84Q86UT8 332 aaPredicted RBP3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 DDX54Q8TDD1 881 aaKnown RBP3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 NKD1Q969G9 470 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 ARMC5Q96C12 935 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 SPATA32Q96LK8 384 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 CORO1BQ9BR76 489 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 USP26Q9BXU7 913 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 LNPKQ9C0E8 428 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 ZNF408Q9H9D4 720 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 LGR6Q9HBX8 967 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 CYP4F12Q9HCS2 524 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 BRMS1Q9HCU9 246 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 PLAGL2Q9UPG8 496 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 POLR3KQ9Y2Y1 108 aaPredicted RBP3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 MRVI1Q9Y6F6 885 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 ABCA8O94911 1581 aa3.28□□□□□ -1.88
DEPDC4-206ENST00000549100 NUP160Q12769 1436 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 DHX29Q7Z478 1369 aaKnown RBP3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 TONSLQ96HA7 1378 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 CCDC7Q96M83 1385 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 KIF7Q2M1P5 1343 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 GRIN3BO60391 1043 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 SSBP05455 408 aaKnown RBP eCLIP3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 RAB6AP20340 208 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 GLDCP23378 1020 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 MCM4P33991 863 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 ETFBP38117 255 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 ZXDAP98168 799 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 RPL6Q02878 288 aaKnown RBP3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 CLCQ05315 142 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 RBL2Q08999 1139 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 PDE3AQ14432 1141 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 INPP5AQ14642 412 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 CWF19L2Q2TBE0 894 aaKnown RBP3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 WIPI1Q5MNZ9 446 aaPredicted RBP3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 LRFN4Q6PJG9 635 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 GK5Q6ZS86 529 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 DPH6Q7L8W6 267 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 FAM169BQ8N8A8 192 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 SLC16A11Q8NCK7 471 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 PMFBP1Q8TBY8 1022 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 PLPPR2Q96GM1 343 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 ACSBG1Q96GR2 724 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 SHDQ96IW2 340 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 KRT82Q9NSB4 513 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 PCDHA4Q9UN74 947 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 PCDHGC5Q9Y5F6 944 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 ACTL7BQ9Y614 415 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 ARHGEF12Q9NZN5 1544 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 CAMSAP2Q08AD1 1489 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms