RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 DIRC2Q96SL1 478 aa7.59□□□□□ -1.19
UBE2N-202ENST00000548946 NSUN3Q9H649 340 aaKnown RBP7.59□□□□□ -1.19
UBE2N-202ENST00000548946 CNNM2Q9H8M5 875 aa7.59□□□□□ -1.19
UBE2N-202ENST00000548946 SHISA3A0PJX4 238 aa7.58□□□□□ -1.2
UBE2N-202ENST00000548946 FITM1A5D6W6 292 aa7.58□□□□□ -1.2
UBE2N-202ENST00000548946 ZNF76P36508 570 aa7.58□□□□□ -1.2
UBE2N-202ENST00000548946 DUSP4Q13115 394 aa7.58□□□□□ -1.2
UBE2N-202ENST00000548946 NLRC3Q7RTR2 1065 aa7.58□□□□□ -1.2
UBE2N-202ENST00000548946 KIAA0825Q8IV33 1275 aa7.58□□□□□ -1.2
UBE2N-202ENST00000548946 SYTL5Q8TDW5 730 aaPredicted RBP7.58□□□□□ -1.2
UBE2N-202ENST00000548946 ATG4CQ96DT6 458 aa7.58□□□□□ -1.2
UBE2N-202ENST00000548946 SPON2Q9BUD6 331 aa7.58□□□□□ -1.2
UBE2N-202ENST00000548946 CLEC3AO75596 197 aa7.57□□□□□ -1.2
UBE2N-202ENST00000548946 RAP1GAPP47736 663 aa7.57□□□□□ -1.2
UBE2N-202ENST00000548946 CHRNEQ04844 493 aa7.57□□□□□ -1.2
UBE2N-202ENST00000548946 CLCQ05315 142 aa7.57□□□□□ -1.2
UBE2N-202ENST00000548946 NBPF12Q5TAG4 269 aaPredicted RBP7.57□□□□□ -1.2
UBE2N-202ENST00000548946 SYDE1Q6ZW31 735 aaPredicted RBP7.57□□□□□ -1.2
UBE2N-202ENST00000548946 SLITRK4Q8IW52 837 aa7.57□□□□□ -1.2
UBE2N-202ENST00000548946 EPB41L4BQ9H329 900 aa7.57□□□□□ -1.2
UBE2N-202ENST00000548946 DCP1AQ9NPI6 582 aaPredicted RBP7.57□□□□□ -1.2
UBE2N-202ENST00000548946 TSPAN15O95858 294 aa7.56□□□□□ -1.2
UBE2N-202ENST00000548946 TRHRP34981 398 aaPredicted RBP7.56□□□□□ -1.2
UBE2N-202ENST00000548946 TEKQ02763 1124 aa7.56□□□□□ -1.2
UBE2N-202ENST00000548946 NR0B2Q15466 257 aa7.56□□□□□ -1.2
UBE2N-202ENST00000548946 NBPF9Q3BBW0 867 aa7.56□□□□□ -1.2
UBE2N-202ENST00000548946 RNF111Q6ZNA4 994 aa7.56□□□□□ -1.2
UBE2N-202ENST00000548946 ZNF655Q8N720 491 aaPredicted RBP7.56□□□□□ -1.2
UBE2N-202ENST00000548946 DAGLBQ8NCG7 672 aa7.56□□□□□ -1.2
UBE2N-202ENST00000548946 HDAC8Q9BY41 377 aa7.56□□□□□ -1.2
UBE2N-202ENST00000548946 BACH2Q9BYV9 841 aa7.56□□□□□ -1.2
UBE2N-202ENST00000548946 METTL5Q9NRN9 209 aaKnown RBP7.56□□□□□ -1.2
UBE2N-202ENST00000548946 SMARCA4P51532 1647 aa7.56□□□□□ -1.2
UBE2N-202ENST00000548946 SSU72P8A0A1W2PR75 194 aa7.55□□□□□ -1.2
UBE2N-202ENST00000548946 NFIBO00712 420 aa7.55□□□□□ -1.2
UBE2N-202ENST00000548946 POLR2BP30876 1174 aaKnown RBP7.55□□□□□ -1.2
UBE2N-202ENST00000548946 MFAP1P55081 439 aaKnown RBP7.55□□□□□ -1.2
UBE2N-202ENST00000548946 ANKS4BQ8N8V4 417 aa7.55□□□□□ -1.2
UBE2N-202ENST00000548946 EAF1Q96JC9 268 aaPredicted RBP7.55□□□□□ -1.2
UBE2N-202ENST00000548946 C19orf44Q9H6X5 657 aa7.55□□□□□ -1.2
UBE2N-202ENST00000548946 KIF21BO75037 1637 aa7.54□□□□□ -1.2
UBE2N-202ENST00000548946 MEIS3P2A8K0S8 358 aa7.54□□□□□ -1.2
UBE2N-202ENST00000548946 NME1P15531 152 aaKnown RBP7.54□□□□□ -1.2
UBE2N-202ENST00000548946 SNX17Q15036 470 aa7.54□□□□□ -1.2
UBE2N-202ENST00000548946 LDLRAD1Q5T700 205 aa7.54□□□□□ -1.2
UBE2N-202ENST00000548946 USP48Q86UV5 1035 aa7.54□□□□□ -1.2
UBE2N-202ENST00000548946 TCTN2Q96GX1 697 aa7.54□□□□□ -1.2
UBE2N-202ENST00000548946 TOX2Q96NM4 488 aa7.54□□□□□ -1.2
UBE2N-202ENST00000548946 RNF32Q9H0A6 362 aa7.54□□□□□ -1.2
UBE2N-202ENST00000548946 SLC6A17Q9H1V8 727 aa7.54□□□□□ -1.2
UBE2N-202ENST00000548946 SP110Q9HB58 689 aa7.54□□□□□ -1.2
UBE2N-202ENST00000548946 CWC22Q9HCG8 908 aaKnown RBP7.54□□□□□ -1.2
UBE2N-202ENST00000548946 CEP164Q9UPV0 1460 aa7.54□□□□□ -1.2
UBE2N-202ENST00000548946 VPS8Q8N3P4 1428 aa7.53□□□□□ -1.2
UBE2N-202ENST00000548946 TMEM253P0C7T8 217 aa7.53□□□□□ -1.2
UBE2N-202ENST00000548946 IMPDH2P12268 514 aa7.53□□□□□ -1.2
UBE2N-202ENST00000548946 RPL10P27635 214 aaKnown RBP7.53□□□□□ -1.2
UBE2N-202ENST00000548946 PCBP3P57721 371 aaKnown RBP7.53□□□□□ -1.2
UBE2N-202ENST00000548946 TMC3Q7Z5M5 1100 aa7.53□□□□□ -1.2
UBE2N-202ENST00000548946 ANKLE2Q86XL3 938 aa7.53□□□□□ -1.2
UBE2N-202ENST00000548946 USHBP1Q8N6Y0 703 aa7.53□□□□□ -1.2
UBE2N-202ENST00000548946 ANTXR1Q9H6X2 564 aa7.53□□□□□ -1.2
UBE2N-202ENST00000548946 ZMYM5Q9UJ78 669 aa7.53□□□□□ -1.2
UBE2N-202ENST00000548946 CLIP1P30622 1438 aa7.52□□□□□ -1.2
UBE2N-202ENST00000548946 TNFRSF10CO14798 259 aa7.52□□□□□ -1.21
UBE2N-202ENST00000548946 FANCCQ00597 558 aa7.52□□□□□ -1.21
UBE2N-202ENST00000548946 IRF2BP1Q8IU81 584 aa7.52□□□□□ -1.21
UBE2N-202ENST00000548946 LINC00116Q8NCU8 138 aa7.52□□□□□ -1.21
UBE2N-202ENST00000548946 LINC01599Q8WXQ3 324 aa7.52□□□□□ -1.21
UBE2N-202ENST00000548946 DHRS1Q96LJ7 313 aa7.52□□□□□ -1.21
UBE2N-202ENST00000548946 SLC26A8Q96RN1 970 aa7.52□□□□□ -1.21
UBE2N-202ENST00000548946 FOXP3Q9BZS1 431 aa7.52□□□□□ -1.21
UBE2N-202ENST00000548946 MKRN2Q9H000 416 aaKnown RBP7.52□□□□□ -1.21
UBE2N-202ENST00000548946 GPR160Q9UJ42 338 aa7.52□□□□□ -1.21
UBE2N-202ENST00000548946 TCFL5Q9UL49 500 aa7.52□□□□□ -1.21
UBE2N-202ENST00000548946 ZNF281Q9Y2X9 895 aa7.52□□□□□ -1.21
UBE2N-202ENST00000548946 SIGLEC6O43699 453 aa7.51□□□□□ -1.21
UBE2N-202ENST00000548946 SNW1Q13573 536 aaKnown RBP7.51□□□□□ -1.21
UBE2N-202ENST00000548946 KRTAP19-4Q3LI73 84 aa7.51□□□□□ -1.21
UBE2N-202ENST00000548946 INTS3Q68E01 1043 aaKnown RBP7.51□□□□□ -1.21
UBE2N-202ENST00000548946 WAPLQ7Z5K2 1190 aa7.51□□□□□ -1.21
UBE2N-202ENST00000548946 RNF34Q969K3 372 aa7.51□□□□□ -1.21
UBE2N-202ENST00000548946 ZNF512BQ96KM6 892 aaPredicted RBP7.51□□□□□ -1.21
UBE2N-202ENST00000548946 SLC6A18Q96N87 628 aa7.51□□□□□ -1.21
UBE2N-202ENST00000548946 PRDM14Q9GZV8 571 aa7.51□□□□□ -1.21
UBE2N-202ENST00000548946 YBX2Q9Y2T7 364 aaKnown RBP7.51□□□□□ -1.21
UBE2N-202ENST00000548946 BAZ1BQ9UIG0 1483 aaKnown RBP7.5□□□□□ -1.21
UBE2N-202ENST00000548946 DHX57Q6P158 1386 aaKnown RBP7.5□□□□□ -1.21
UBE2N-202ENST00000548946 PRAMEF1O95521 474 aa7.5□□□□□ -1.21
UBE2N-202ENST00000548946 C1QTNF9P0C862 333 aa7.5□□□□□ -1.21
UBE2N-202ENST00000548946 SLC14A2Q15849 920 aa7.5□□□□□ -1.21
UBE2N-202ENST00000548946 TIGD5Q53EQ6 642 aa7.5□□□□□ -1.21
UBE2N-202ENST00000548946 TMEM192Q8IY95 271 aa7.5□□□□□ -1.21
UBE2N-202ENST00000548946 ZSCAN18Q8TBC5 510 aaPredicted RBP7.5□□□□□ -1.21
UBE2N-202ENST00000548946 KCNN1Q92952 543 aa7.5□□□□□ -1.21
UBE2N-202ENST00000548946 FERD3LQ96RJ6 166 aa7.5□□□□□ -1.21
UBE2N-202ENST00000548946 CHST7Q9NS84 486 aa7.5□□□□□ -1.21
UBE2N-202ENST00000548946 FBXL21Q9UKT6 434 aa7.5□□□□□ -1.21
UBE2N-202ENST00000548946 PCDHB12Q9Y5F1 795 aa7.5□□□□□ -1.21
UBE2N-202ENST00000548946 SYPP08247 313 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms