RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 ROBO3Q96MS0 1386 aa11.31□□□□□ -0.6
USP15-208ENST00000548524 MAPK4P31152 587 aa11.31□□□□□ -0.6
USP15-208ENST00000548524 PPARAQ07869 468 aa11.31□□□□□ -0.6
USP15-208ENST00000548524 NMIQ13287 307 aaPredicted RBP11.31□□□□□ -0.6
USP15-208ENST00000548524 COG2Q14746 738 aa11.31□□□□□ -0.6
USP15-208ENST00000548524 Q3C1V9 767 aa11.31□□□□□ -0.6
USP15-208ENST00000548524 WDR78Q5VTH9 848 aa11.31□□□□□ -0.6
USP15-208ENST00000548524 TMEM92Q6UXU6 159 aa11.31□□□□□ -0.6
USP15-208ENST00000548524 SIAH1Q8IUQ4 282 aa11.31□□□□□ -0.6
USP15-208ENST00000548524 SPICE1Q8N0Z3 855 aa11.31□□□□□ -0.6
USP15-208ENST00000548524 GOPCQ9HD26 462 aa11.31□□□□□ -0.6
USP15-208ENST00000548524 WDR70Q9NW82 654 aa11.31□□□□□ -0.6
USP15-208ENST00000548524 HOXC10Q9NYD6 342 aa11.31□□□□□ -0.6
USP15-208ENST00000548524 ATAD5Q96QE3 1844 aa11.3□□□□□ -0.6
USP15-208ENST00000548524 A0A0D9SFI3 127 aa11.3□□□□□ -0.6
USP15-208ENST00000548524 C2orf72A6NCS6 295 aa11.3□□□□□ -0.6
USP15-208ENST00000548524 SPDYE16A6NNV3 312 aaPredicted RBP11.3□□□□□ -0.6
USP15-208ENST00000548524 WDR46O15213 610 aaKnown RBP11.3□□□□□ -0.6
USP15-208ENST00000548524 FLOT1O75955 427 aa11.3□□□□□ -0.6
USP15-208ENST00000548524 ELNP15502 786 aa11.3□□□□□ -0.6
USP15-208ENST00000548524 EN2P19622 333 aaPredicted RBP11.3□□□□□ -0.6
USP15-208ENST00000548524 SDSP20132 328 aa11.3□□□□□ -0.6
USP15-208ENST00000548524 MFAP1P55081 439 aaKnown RBP11.3□□□□□ -0.6
USP15-208ENST00000548524 MTFR1Q15390 333 aa11.3□□□□□ -0.6
USP15-208ENST00000548524 KIAA1755Q5JYT7 1200 aa11.3□□□□□ -0.6
USP15-208ENST00000548524 VPS53Q5VIR6 699 aa11.3□□□□□ -0.6
USP15-208ENST00000548524 PLEKHH3Q7Z736 793 aa11.3□□□□□ -0.6
USP15-208ENST00000548524 PXYLP1Q8TE99 480 aa11.3□□□□□ -0.6
USP15-208ENST00000548524 NUDT12Q9BQG2 462 aa11.3□□□□□ -0.6
USP15-208ENST00000548524 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.3□□□□□ -0.6
USP15-208ENST00000548524 GPHNQ9NQX3 736 aaPredicted RBP11.3□□□□□ -0.6
USP15-208ENST00000548524 DIAPH3Q9NSV4 1193 aa11.3□□□□□ -0.6
USP15-208ENST00000548524 LOC285556D6RIA3 1793 aa11.3□□□□□ -0.6
USP15-208ENST00000548524 HIP1O00291 1037 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 CNMDO75829 334 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 INHAP05111 366 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 TSPY3P0CV98 308 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 TSPY8P0CW00 308 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 CCL5P13501 91 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 CYP2B6P20813 491 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 CTDSPL2Q05D32 466 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 LBX2Q6XYB7 198 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 GPR142Q7Z601 462 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 SOCS4Q8WXH5 440 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 RNF208Q9H0X6 261 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 PORCNQ9H237 461 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 BTBD7Q9P203 1132 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 NYAP2Q9P242 653 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 CLIP2Q9UDT6 1046 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 GJD2Q9UKL4 321 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 CCDC171Q6TFL3 1326 aa11.29□□□□□ -0.6
USP15-208ENST00000548524 TSPY2A6NKD2 308 aa11.28□□□□□ -0.6
USP15-208ENST00000548524 FOXP2O15409 715 aa11.28□□□□□ -0.6
USP15-208ENST00000548524 TFAP4Q01664 338 aa11.28□□□□□ -0.6
USP15-208ENST00000548524 PLS1Q14651 629 aa11.28□□□□□ -0.6
USP15-208ENST00000548524 ALX1Q15699 326 aa11.28□□□□□ -0.6
USP15-208ENST00000548524 FAM47AQ5JRC9 791 aa11.28□□□□□ -0.6
USP15-208ENST00000548524 POTEEQ6S8J3 1075 aa11.28□□□□□ -0.6
USP15-208ENST00000548524 ZNF589Q86UQ0 364 aaPredicted RBP11.28□□□□□ -0.6
USP15-208ENST00000548524 MB21D1Q8N884 522 aa11.28□□□□□ -0.6
USP15-208ENST00000548524 NEDD1Q8NHV4 660 aa11.28□□□□□ -0.6
USP15-208ENST00000548524 NKX2-3Q8TAU0 364 aa11.28□□□□□ -0.6
USP15-208ENST00000548524 ATG4CQ96DT6 458 aa11.28□□□□□ -0.6
USP15-208ENST00000548524 SCUBE2Q9NQ36 999 aa11.28□□□□□ -0.6
USP15-208ENST00000548524 TOMM22Q9NS69 142 aa11.28□□□□□ -0.6
USP15-208ENST00000548524 IVNS1ABPQ9Y6Y0 642 aa11.28□□□□□ -0.6
USP15-208ENST00000548524 ZSWIM8A7E2V4 1837 aa11.28□□□□□ -0.6
USP15-208ENST00000548524 PTPRFP10586 1907 aa11.27□□□□□ -0.6
USP15-208ENST00000548524 IGKV6D-41A0A0C4DH26 115 aa11.27□□□□□ -0.61
USP15-208ENST00000548524 F5H6K3 240 aa11.27□□□□□ -0.61
USP15-208ENST00000548524 RANBP6O60518 1105 aaKnown RBP11.27□□□□□ -0.61
USP15-208ENST00000548524 TTLL1O95922 423 aa11.27□□□□□ -0.61
USP15-208ENST00000548524 FGAP02671 866 aa11.27□□□□□ -0.61
USP15-208ENST00000548524 HMGCRP04035 888 aa11.27□□□□□ -0.61
USP15-208ENST00000548524 HSPD1P10809 573 aaKnown RBP11.27□□□□□ -0.61
USP15-208ENST00000548524 RGS2P41220 211 aa11.27□□□□□ -0.61
USP15-208ENST00000548524 KLRC3Q07444 240 aa11.27□□□□□ -0.61
USP15-208ENST00000548524 RRP12Q5JTH9 1297 aaKnown RBP11.27□□□□□ -0.61
USP15-208ENST00000548524 PPP4R3BQ5MIZ7 849 aa11.27□□□□□ -0.61
USP15-208ENST00000548524 FAM83BQ5T0W9 1011 aa11.27□□□□□ -0.61
USP15-208ENST00000548524 LHX8Q68G74 356 aa11.27□□□□□ -0.61
USP15-208ENST00000548524 CWC27Q6UX04 472 aaKnown RBP11.27□□□□□ -0.61
USP15-208ENST00000548524 MAMSTRQ6ZN01 415 aa11.27□□□□□ -0.61
USP15-208ENST00000548524 CEP95Q96GE4 821 aa11.27□□□□□ -0.61
USP15-208ENST00000548524 DDX27Q96GQ7 796 aaKnown RBP11.27□□□□□ -0.61
USP15-208ENST00000548524 SPATC1LQ9H0A9 340 aa11.27□□□□□ -0.61
USP15-208ENST00000548524 UNC93B1Q9H1C4 597 aa11.27□□□□□ -0.61
USP15-208ENST00000548524 MTMR4Q9NYA4 1195 aa11.27□□□□□ -0.61
USP15-208ENST00000548524 ANAPC4Q9UJX5 808 aa11.27□□□□□ -0.61
USP15-208ENST00000548524 ISY1Q9ULR0 285 aaKnown RBP11.27□□□□□ -0.61
USP15-208ENST00000548524 HTTP42858 3142 aa11.26□□□□□ -0.61
USP15-208ENST00000548524 NDUFB10O96000 172 aa11.26□□□□□ -0.61
USP15-208ENST00000548524 GJB1P08034 283 aa11.26□□□□□ -0.61
USP15-208ENST00000548524 ZKSCAN1P17029 563 aaPredicted RBP11.26□□□□□ -0.61
USP15-208ENST00000548524 PTPREP23469 700 aa11.26□□□□□ -0.61
USP15-208ENST00000548524 MORN1Q5T089 497 aa11.26□□□□□ -0.61
USP15-208ENST00000548524 TTC22Q5TAA0 569 aa11.26□□□□□ -0.61
USP15-208ENST00000548524 NCAPG2Q86XI2 1143 aa11.26□□□□□ -0.61
USP15-208ENST00000548524 TRMT44Q8IYL2 757 aaKnown RBP11.26□□□□□ -0.61
USP15-208ENST00000548524 LRRC47Q8N1G4 583 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms