RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 ST14Q9Y5Y6 855 aa6.59□□□□□ -1.35
DEPDC4-205ENST00000548313 MRVI1Q9Y6F6 885 aa6.59□□□□□ -1.35
DEPDC4-205ENST00000548313 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.59□□□□□ -1.35
DEPDC4-205ENST00000548313 CARMIL2Q6F5E8 1435 aa6.59□□□□□ -1.36
DEPDC4-205ENST00000548313 ETFBP38117 255 aa6.58□□□□□ -1.36
DEPDC4-205ENST00000548313 ZYXQ15942 572 aaKnown RBP6.58□□□□□ -1.36
DEPDC4-205ENST00000548313 NBPF9Q3BBW0 867 aa6.58□□□□□ -1.36
DEPDC4-205ENST00000548313 ANKRD39Q53RE8 183 aa6.58□□□□□ -1.36
DEPDC4-205ENST00000548313 CDKAL1Q5VV42 579 aa6.58□□□□□ -1.36
DEPDC4-205ENST00000548313 KSR1Q8IVT5 923 aa6.58□□□□□ -1.36
DEPDC4-205ENST00000548313 ENOX1Q8TC92 643 aaKnown RBP6.58□□□□□ -1.36
DEPDC4-205ENST00000548313 LTBP3Q9NS15 1303 aa6.57□□□□□ -1.36
DEPDC4-205ENST00000548313 SMAD7O15105 426 aaKnown RBP6.57□□□□□ -1.36
DEPDC4-205ENST00000548313 LRRN2O75325 713 aa6.57□□□□□ -1.36
DEPDC4-205ENST00000548313 STK10O94804 968 aaKnown RBP6.57□□□□□ -1.36
DEPDC4-205ENST00000548313 SRFP11831 508 aa6.57□□□□□ -1.36
DEPDC4-205ENST00000548313 AOC3Q16853 763 aa6.57□□□□□ -1.36
DEPDC4-205ENST00000548313 KRTAP19-4Q3LI73 84 aa6.57□□□□□ -1.36
DEPDC4-205ENST00000548313 SREK1Q8WXA9 508 aaKnown RBP6.57□□□□□ -1.36
DEPDC4-205ENST00000548313 HSPA12BQ96MM6 686 aa6.57□□□□□ -1.36
DEPDC4-205ENST00000548313 SLC38A3Q99624 504 aa6.57□□□□□ -1.36
DEPDC4-205ENST00000548313 ASCC2Q9H1I8 757 aaPredicted RBP6.57□□□□□ -1.36
DEPDC4-205ENST00000548313 DUSP15Q9H1R2 295 aaPredicted RBP6.57□□□□□ -1.36
DEPDC4-205ENST00000548313 SEMA3GQ9NS98 782 aa6.57□□□□□ -1.36
DEPDC4-205ENST00000548313 GPATCH2Q9NW75 528 aa6.57□□□□□ -1.36
DEPDC4-205ENST00000548313 ACTR10Q9NZ32 417 aa6.57□□□□□ -1.36
DEPDC4-205ENST00000548313 PRR13Q9NZ81 148 aa6.57□□□□□ -1.36
DEPDC4-205ENST00000548313 PITPNM2Q9BZ72 1349 aa6.56□□□□□ -1.36
DEPDC4-205ENST00000548313 FAM86C2PA6NEL3 165 aa6.56□□□□□ -1.36
DEPDC4-205ENST00000548313 AUHQ13825 339 aaKnown RBP6.56□□□□□ -1.36
DEPDC4-205ENST00000548313 ZNF574Q6ZN55 896 aaPredicted RBP6.56□□□□□ -1.36
DEPDC4-205ENST00000548313 TMPRSS7Q7RTY8 843 aa6.56□□□□□ -1.36
DEPDC4-205ENST00000548313 SPRED2Q7Z698 418 aa6.56□□□□□ -1.36
DEPDC4-205ENST00000548313 FAM168AQ92567 244 aa6.56□□□□□ -1.36
DEPDC4-205ENST00000548313 MKRN2Q9H000 416 aaKnown RBP6.56□□□□□ -1.36
DEPDC4-205ENST00000548313 R3HCC1Q9Y3T6 440 aaKnown RBP6.56□□□□□ -1.36
DEPDC4-205ENST00000548313 RANGAP1P46060 587 aaPredicted RBP6.55□□□□□ -1.36
DEPDC4-205ENST00000548313 SLC7A5Q01650 507 aa6.55□□□□□ -1.36
DEPDC4-205ENST00000548313 GNPTABQ3T906 1256 aa6.55□□□□□ -1.36
DEPDC4-205ENST00000548313 CCDC144CPQ8IYA2 1237 aa6.55□□□□□ -1.36
DEPDC4-205ENST00000548313 C7orf61Q8IZ16 206 aa6.55□□□□□ -1.36
DEPDC4-205ENST00000548313 ZNF512BQ96KM6 892 aaPredicted RBP6.55□□□□□ -1.36
DEPDC4-205ENST00000548313 HIRIP3Q9BW71 556 aaPredicted RBP6.55□□□□□ -1.36
DEPDC4-205ENST00000548313 KRTAP4-11Q9BYQ6 195 aa6.55□□□□□ -1.36
DEPDC4-205ENST00000548313 LMCD1Q9NZU5 365 aa6.55□□□□□ -1.36
DEPDC4-205ENST00000548313 PCDHB12Q9Y5F1 795 aa6.55□□□□□ -1.36
DEPDC4-205ENST00000548313 C9IYK1 514 aa6.54□□□□□ -1.36
DEPDC4-205ENST00000548313 H3BS24 57 aa6.54□□□□□ -1.36
DEPDC4-205ENST00000548313 RBL2Q08999 1139 aa6.54□□□□□ -1.36
DEPDC4-205ENST00000548313 NMIQ13287 307 aaPredicted RBP6.54□□□□□ -1.36
DEPDC4-205ENST00000548313 NCAPHQ15003 741 aa6.54□□□□□ -1.36
DEPDC4-205ENST00000548313 FXNQ16595 210 aa6.54□□□□□ -1.36
DEPDC4-205ENST00000548313 SOGA3Q5TF21 947 aa6.54□□□□□ -1.36
DEPDC4-205ENST00000548313 NBPF6Q5VWK0 638 aa6.54□□□□□ -1.36
DEPDC4-205ENST00000548313 ANKS3Q6ZW76 656 aa6.54□□□□□ -1.36
DEPDC4-205ENST00000548313 TSPYL5Q86VY4 417 aaPredicted RBP6.54□□□□□ -1.36
DEPDC4-205ENST00000548313 CKAP2LQ8IYA6 745 aa6.54□□□□□ -1.36
DEPDC4-205ENST00000548313 SYTL5Q8TDW5 730 aaPredicted RBP6.54□□□□□ -1.36
DEPDC4-205ENST00000548313 UBE2FQ969M7 185 aa6.54□□□□□ -1.36
DEPDC4-205ENST00000548313 NBPF4Q96M43 638 aa6.54□□□□□ -1.36
DEPDC4-205ENST00000548313 RC3H2Q9HBD1 1191 aaKnown RBP6.54□□□□□ -1.36
DEPDC4-205ENST00000548313 ZSWIM5Q9P217 1185 aa6.54□□□□□ -1.36
DEPDC4-205ENST00000548313 KLF4O43474 513 aa6.53□□□□□ -1.36
DEPDC4-205ENST00000548313 FUT4P22083 530 aa6.53□□□□□ -1.36
DEPDC4-205ENST00000548313 GTF2F1P35269 517 aaKnown RBP eCLIP6.53□□□□□ -1.36
DEPDC4-205ENST00000548313 BNIP3Q12983 259 aa6.53□□□□□ -1.36
DEPDC4-205ENST00000548313 TCEAL1Q15170 157 aa6.53□□□□□ -1.36
DEPDC4-205ENST00000548313 CLEC16AQ2KHT3 1053 aa6.53□□□□□ -1.36
DEPDC4-205ENST00000548313 GAB4Q2WGN9 574 aa6.53□□□□□ -1.36
DEPDC4-205ENST00000548313 AXDND1Q5T1B0 1012 aaPredicted RBP6.53□□□□□ -1.36
DEPDC4-205ENST00000548313 ANGEL2Q5VTE6 544 aaKnown RBP6.53□□□□□ -1.36
DEPDC4-205ENST00000548313 VHLLQ6RSH7 139 aa6.53□□□□□ -1.36
DEPDC4-205ENST00000548313 PPFIBP1Q86W92 1011 aa6.53□□□□□ -1.36
DEPDC4-205ENST00000548313 WFDC3Q8IUB2 231 aa6.53□□□□□ -1.36
DEPDC4-205ENST00000548313 DAGLBQ8NCG7 672 aa6.53□□□□□ -1.36
DEPDC4-205ENST00000548313 BHLHE22Q8NFJ8 381 aaPredicted RBP6.53□□□□□ -1.36
DEPDC4-205ENST00000548313 DRC1Q96MC2 740 aa6.53□□□□□ -1.36
DEPDC4-205ENST00000548313 PRDM14Q9GZV8 571 aa6.53□□□□□ -1.36
DEPDC4-205ENST00000548313 FBXL21Q9UKT6 434 aa6.53□□□□□ -1.36
DEPDC4-205ENST00000548313 A0A087WZG4 1122 aa6.52□□□□□ -1.37
DEPDC4-205ENST00000548313 SIGLEC6O43699 453 aa6.52□□□□□ -1.37
DEPDC4-205ENST00000548313 TP53P04637 393 aaPredicted RBP6.52□□□□□ -1.37
DEPDC4-205ENST00000548313 TPP2P29144 1249 aaPredicted RBP6.52□□□□□ -1.37
DEPDC4-205ENST00000548313 ZNF143P52747 638 aaPredicted RBP6.52□□□□□ -1.37
DEPDC4-205ENST00000548313 TDRD10Q5VZ19 366 aaKnown RBP6.52□□□□□ -1.37
DEPDC4-205ENST00000548313 ZNF655Q8N720 491 aaPredicted RBP6.52□□□□□ -1.37
DEPDC4-205ENST00000548313 KLHL6Q8WZ60 621 aa6.52□□□□□ -1.37
DEPDC4-205ENST00000548313 ATP13A1Q9HD20 1204 aa6.52□□□□□ -1.37
DEPDC4-205ENST00000548313 PPP1R1BQ9UD71 204 aaPredicted RBP6.52□□□□□ -1.37
DEPDC4-205ENST00000548313 CD8BP10966 210 aa6.51□□□□□ -1.37
DEPDC4-205ENST00000548313 NAT2P11245 290 aa6.51□□□□□ -1.37
DEPDC4-205ENST00000548313 CD247P20963 164 aa6.51□□□□□ -1.37
DEPDC4-205ENST00000548313 IKZF1Q13422 519 aa6.51□□□□□ -1.37
DEPDC4-205ENST00000548313 RAB33AQ14088 237 aa6.51□□□□□ -1.37
DEPDC4-205ENST00000548313 LARP1BQ659C4 914 aaKnown RBP6.51□□□□□ -1.37
DEPDC4-205ENST00000548313 HEATR6Q6AI08 1181 aaKnown RBP6.51□□□□□ -1.37
DEPDC4-205ENST00000548313 KIAA1211LQ6NV74 962 aa6.51□□□□□ -1.37
DEPDC4-205ENST00000548313 PI4K2BQ8TCG2 481 aa6.51□□□□□ -1.37
DEPDC4-205ENST00000548313 FAM84AQ96KN4 292 aa6.51□□□□□ -1.37
DEPDC4-205ENST00000548313 HAUS7Q99871 368 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms