RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 TMX2Q9Y320 296 aa14.42□□□□□ -0.1
TRAFD1-205ENST00000548277 ZNF236Q9UL36 1845 aa14.42□□□□□ -0.1
TRAFD1-205ENST00000548277 MYH4Q9Y623 1939 aa14.42□□□□□ -0.1
TRAFD1-205ENST00000548277 PGK1P00558 417 aa14.41□□□□□ -0.1
TRAFD1-205ENST00000548277 IGHA2P01877 340 aa14.41□□□□□ -0.1
TRAFD1-205ENST00000548277 EEF2P13639 858 aaKnown RBP14.41□□□□□ -0.1
TRAFD1-205ENST00000548277 ADD2P35612 726 aa14.41□□□□□ -0.1
TRAFD1-205ENST00000548277 TMED8Q6PL24 325 aaPredicted RBP14.41□□□□□ -0.1
TRAFD1-205ENST00000548277 MB21D1Q8N884 522 aa14.41□□□□□ -0.1
TRAFD1-205ENST00000548277 MMP19Q99542 508 aa14.41□□□□□ -0.1
TRAFD1-205ENST00000548277 COL25A1Q9BXS0 654 aaPredicted RBP14.41□□□□□ -0.1
TRAFD1-205ENST00000548277 COG6Q9Y2V7 657 aa14.41□□□□□ -0.1
TRAFD1-205ENST00000548277 MYO9BQ13459 2157 aa14.41□□□□□ -0.1
TRAFD1-205ENST00000548277 TRIM43BA6NCK2 446 aa14.4□□□□□ -0.1
TRAFD1-205ENST00000548277 TAL1P17542 331 aaPredicted RBP14.4□□□□□ -0.1
TRAFD1-205ENST00000548277 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.4□□□□□ -0.1
TRAFD1-205ENST00000548277 SIRT2Q8IXJ6 389 aa14.4□□□□□ -0.1
TRAFD1-205ENST00000548277 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.4□□□□□ -0.1
TRAFD1-205ENST00000548277 TRIM43Q96BQ3 446 aaPredicted RBP14.4□□□□□ -0.1
TRAFD1-205ENST00000548277 XPNPEP3Q9NQH7 507 aa14.4□□□□□ -0.1
TRAFD1-205ENST00000548277 SLC4A4Q9Y6R1 1079 aa14.4□□□□□ -0.1
TRAFD1-205ENST00000548277 TLE2Q04725 743 aa14.39□□□□□ -0.11
TRAFD1-205ENST00000548277 FAM83BQ5T0W9 1011 aa14.39□□□□□ -0.11
TRAFD1-205ENST00000548277 C12orf60Q5U649 245 aa14.39□□□□□ -0.11
TRAFD1-205ENST00000548277 FAM109BQ6ICB4 259 aaPredicted RBP14.39□□□□□ -0.11
TRAFD1-205ENST00000548277 RPAP2Q8IXW5 612 aaPredicted RBP14.39□□□□□ -0.11
TRAFD1-205ENST00000548277 AMOTL1Q8IY63 956 aa14.39□□□□□ -0.11
TRAFD1-205ENST00000548277 LENG1Q96BZ8 264 aaPredicted RBP14.39□□□□□ -0.11
TRAFD1-205ENST00000548277 CDX2Q99626 313 aaPredicted RBP14.39□□□□□ -0.11
TRAFD1-205ENST00000548277 SH2D4AQ9H788 454 aa14.39□□□□□ -0.11
TRAFD1-205ENST00000548277 PDLIM7Q9NR12 457 aa14.39□□□□□ -0.11
TRAFD1-205ENST00000548277 ATP8A2Q9NTI2 1148 aa14.39□□□□□ -0.11
TRAFD1-205ENST00000548277 ZBED9Q6R2W3 1325 aa14.39□□□□□ -0.11
TRAFD1-205ENST00000548277 WDR46O15213 610 aaKnown RBP14.38□□□□□ -0.11
TRAFD1-205ENST00000548277 SMARCA5O60264 1052 aaPredicted RBP14.38□□□□□ -0.11
TRAFD1-205ENST00000548277 HMMRO75330 724 aa14.38□□□□□ -0.11
TRAFD1-205ENST00000548277 SLC25A27O95847 323 aa14.38□□□□□ -0.11
TRAFD1-205ENST00000548277 RARBP10826 455 aa14.38□□□□□ -0.11
TRAFD1-205ENST00000548277 STAT3P40763 770 aa14.38□□□□□ -0.11
TRAFD1-205ENST00000548277 KCTD2Q14681 263 aa14.38□□□□□ -0.11
TRAFD1-205ENST00000548277 ABRAQ8N0Z2 381 aa14.38□□□□□ -0.11
TRAFD1-205ENST00000548277 DDRGK1Q96HY6 314 aa14.38□□□□□ -0.11
TRAFD1-205ENST00000548277 CCDC17Q96LX7 622 aa14.38□□□□□ -0.11
TRAFD1-205ENST00000548277 NUP88Q99567 741 aaPredicted RBP14.38□□□□□ -0.11
TRAFD1-205ENST00000548277 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.38□□□□□ -0.11
TRAFD1-205ENST00000548277 SEMA6BQ9H3T3 888 aa14.38□□□□□ -0.11
TRAFD1-205ENST00000548277 RAB11FIP3O75154 756 aa14.37□□□□□ -0.11
TRAFD1-205ENST00000548277 ATP5JP18859 108 aa14.37□□□□□ -0.11
TRAFD1-205ENST00000548277 ITGB8P26012 769 aa14.37□□□□□ -0.11
TRAFD1-205ENST00000548277 CTR9Q6PD62 1173 aa14.37□□□□□ -0.11
TRAFD1-205ENST00000548277 C16orf86Q6ZW13 317 aa14.37□□□□□ -0.11
TRAFD1-205ENST00000548277 MYLIPQ8WY64 445 aa14.37□□□□□ -0.11
TRAFD1-205ENST00000548277 TINF2Q9BSI4 451 aa14.37□□□□□ -0.11
TRAFD1-205ENST00000548277 PUS7LQ9H0K6 701 aaKnown RBP14.37□□□□□ -0.11
TRAFD1-205ENST00000548277 MINDY4BA8MYZ0 360 aa14.36□□□□□ -0.11
TRAFD1-205ENST00000548277 VWA5AO00534 786 aa14.36□□□□□ -0.11
TRAFD1-205ENST00000548277 PQBP1O60828 265 aaKnown RBP14.36□□□□□ -0.11
TRAFD1-205ENST00000548277 ZNF792Q3KQV3 632 aa14.36□□□□□ -0.11
TRAFD1-205ENST00000548277 RNF180Q86T96 592 aa14.36□□□□□ -0.11
TRAFD1-205ENST00000548277 RIOX2Q8IUF8 465 aa14.36□□□□□ -0.11
TRAFD1-205ENST00000548277 HAUS7Q99871 368 aa14.36□□□□□ -0.11
TRAFD1-205ENST00000548277 KANSL2Q9H9L4 492 aa14.36□□□□□ -0.11
TRAFD1-205ENST00000548277 GOPCQ9HD26 462 aa14.36□□□□□ -0.11
TRAFD1-205ENST00000548277 CLTBP09497 229 aa14.35□□□□□ -0.11
TRAFD1-205ENST00000548277 RAG1P15918 1043 aa14.35□□□□□ -0.11
TRAFD1-205ENST00000548277 EPHB4P54760 987 aa14.35□□□□□ -0.11
TRAFD1-205ENST00000548277 IRX5P78411 483 aaPredicted RBP14.35□□□□□ -0.11
TRAFD1-205ENST00000548277 SNX17Q15036 470 aa14.35□□□□□ -0.11
TRAFD1-205ENST00000548277 CPXCR1Q8N123 301 aa14.35□□□□□ -0.11
TRAFD1-205ENST00000548277 MAFAQ8NHW3 353 aaPredicted RBP14.35□□□□□ -0.11
TRAFD1-205ENST00000548277 CHMP4CQ96CF2 233 aa14.35□□□□□ -0.11
TRAFD1-205ENST00000548277 DDX11Q96FC9 970 aa14.35□□□□□ -0.11
TRAFD1-205ENST00000548277 TTYH1Q9H313 450 aaPredicted RBP14.35□□□□□ -0.11
TRAFD1-205ENST00000548277 MKNK2Q9HBH9 465 aa14.35□□□□□ -0.11
TRAFD1-205ENST00000548277 ZBTB40Q9NUA8 1239 aa14.35□□□□□ -0.11
TRAFD1-205ENST00000548277 PPP1R9AQ9ULJ8 1098 aa14.35□□□□□ -0.11
TRAFD1-205ENST00000548277 DDX19BQ9UMR2 479 aa14.35□□□□□ -0.11
TRAFD1-205ENST00000548277 ADAMTS5Q9UNA0 930 aa14.35□□□□□ -0.11
TRAFD1-205ENST00000548277 PHF24Q9UPV7 400 aa14.35□□□□□ -0.11
TRAFD1-205ENST00000548277 TACC3Q9Y6A5 838 aa14.35□□□□□ -0.11
TRAFD1-205ENST00000548277 A0A1W2PQ45 241 aaPredicted RBP14.34□□□□□ -0.11
TRAFD1-205ENST00000548277 A0A1W2PQY0 241 aa14.34□□□□□ -0.11
TRAFD1-205ENST00000548277 ZNF865P0CJ78 1059 aaPredicted RBP14.34□□□□□ -0.11
TRAFD1-205ENST00000548277 MS4A1P11836 297 aa14.34□□□□□ -0.11
TRAFD1-205ENST00000548277 UBE3CQ15386 1083 aa14.34□□□□□ -0.11
TRAFD1-205ENST00000548277 RNPC3Q96LT9 517 aaKnown RBP14.34□□□□□ -0.11
TRAFD1-205ENST00000548277 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.34□□□□□ -0.11
TRAFD1-205ENST00000548277 TMEM39AQ9NV64 488 aa14.34□□□□□ -0.11
TRAFD1-205ENST00000548277 ZHX1Q9UKY1 873 aaPredicted RBP14.34□□□□□ -0.11
TRAFD1-205ENST00000548277 ZNF214Q9UL59 606 aaPredicted RBP14.34□□□□□ -0.11
TRAFD1-205ENST00000548277 CNPY2Q9Y2B0 182 aa14.34□□□□□ -0.11
TRAFD1-205ENST00000548277 RIPK3Q9Y572 518 aa14.34□□□□□ -0.11
TRAFD1-205ENST00000548277 CTDP1Q9Y5B0 961 aaPredicted RBP14.34□□□□□ -0.11
TRAFD1-205ENST00000548277 AKR1A1P14550 325 aa14.33□□□□□ -0.12
TRAFD1-205ENST00000548277 SNRNP48Q6IEG0 339 aaKnown RBP14.33□□□□□ -0.12
TRAFD1-205ENST00000548277 ZSCAN25Q6NSZ9 544 aa14.33□□□□□ -0.12
TRAFD1-205ENST00000548277 REPS2Q8NFH8 660 aa14.33□□□□□ -0.12
TRAFD1-205ENST00000548277 VTI1AQ96AJ9 217 aa14.33□□□□□ -0.12
TRAFD1-205ENST00000548277 SLF1Q9BQI6 1058 aa14.33□□□□□ -0.12
TRAFD1-205ENST00000548277 RAVER2Q9HCJ3 691 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms