RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	MINPP1	Q9UNW1	487 aa		6.74	□□□□□ -1.33
RPAP3-205	ENST00000548211	USP2	O75604	605 aa	Predicted RBP	6.73	□□□□□ -1.33
RPAP3-205	ENST00000548211	INHBB	P09529	407 aa		6.73	□□□□□ -1.33
RPAP3-205	ENST00000548211	CRK	P46108	304 aa		6.73	□□□□□ -1.33
RPAP3-205	ENST00000548211	ERMP1	Q7Z2K6	904 aa		6.73	□□□□□ -1.33
RPAP3-205	ENST00000548211	SPPL2C	Q8IUH8	684 aa		6.73	□□□□□ -1.33
RPAP3-205	ENST00000548211	ANKS4B	Q8N8V4	417 aa		6.73	□□□□□ -1.33
RPAP3-205	ENST00000548211	SYTL4	Q96C24	671 aa	Predicted RBP	6.73	□□□□□ -1.33
RPAP3-205	ENST00000548211	FOXP3	Q9BZS1	431 aa		6.73	□□□□□ -1.33
RPAP3-205	ENST00000548211	ZNF552	Q9H707	407 aa	Predicted RBP	6.73	□□□□□ -1.33
RPAP3-205	ENST00000548211	PCDHB14	Q9Y5E9	798 aa		6.73	□□□□□ -1.33
RPAP3-205	ENST00000548211	RB1CC1	Q8TDY2	1594 aa		6.73	□□□□□ -1.33
RPAP3-205	ENST00000548211	PDIA4	P13667	645 aa	Known RBP	6.72	□□□□□ -1.33
RPAP3-205	ENST00000548211	CHRNE	Q04844	493 aa		6.72	□□□□□ -1.33
RPAP3-205	ENST00000548211	PWP1	Q13610	501 aa		6.72	□□□□□ -1.33
RPAP3-205	ENST00000548211	TCTN2	Q96GX1	697 aa		6.72	□□□□□ -1.33
RPAP3-205	ENST00000548211	ZNF512B	Q96KM6	892 aa	Predicted RBP	6.72	□□□□□ -1.33
RPAP3-205	ENST00000548211	TMEM82	A0PJX8	343 aa		6.71	□□□□□ -1.34
RPAP3-205	ENST00000548211	GREM1	O60565	184 aa		6.71	□□□□□ -1.34
RPAP3-205	ENST00000548211	FKTN	O75072	461 aa		6.71	□□□□□ -1.34
RPAP3-205	ENST00000548211	RAG1	P15918	1043 aa		6.71	□□□□□ -1.34
RPAP3-205	ENST00000548211	SDHB	P21912	280 aa		6.71	□□□□□ -1.34
RPAP3-205	ENST00000548211	DUSP4	Q13115	394 aa		6.71	□□□□□ -1.34
RPAP3-205	ENST00000548211	NBPF12	Q5TAG4	269 aa	Predicted RBP	6.71	□□□□□ -1.34
RPAP3-205	ENST00000548211	OVOS1	Q6IE37	1185 aa		6.71	□□□□□ -1.34
RPAP3-205	ENST00000548211	TMEM132E	Q6IEE7	984 aa		6.71	□□□□□ -1.34
RPAP3-205	ENST00000548211	WAPL	Q7Z5K2	1190 aa		6.71	□□□□□ -1.34
RPAP3-205	ENST00000548211	NLRX1	Q86UT6	975 aa		6.71	□□□□□ -1.34
RPAP3-205	ENST00000548211	SYTL5	Q8TDW5	730 aa	Predicted RBP	6.71	□□□□□ -1.34
RPAP3-205	ENST00000548211	ZMYM5	Q9UJ78	669 aa		6.71	□□□□□ -1.34
RPAP3-205	ENST00000548211	PEX10	O60683	326 aa		6.7	□□□□□ -1.34
RPAP3-205	ENST00000548211	EIF4A3	P38919	411 aa	Known RBP	6.7	□□□□□ -1.34
RPAP3-205	ENST00000548211	CHMP4BP1	P59074	171 aa		6.7	□□□□□ -1.34
RPAP3-205	ENST00000548211	KIR3DS1	Q14943	382 aa		6.7	□□□□□ -1.34
RPAP3-205	ENST00000548211	SNX17	Q15036	470 aa		6.7	□□□□□ -1.34
RPAP3-205	ENST00000548211	CWF19L2	Q2TBE0	894 aa	Known RBP	6.7	□□□□□ -1.34
RPAP3-205	ENST00000548211	NBPF9	Q3BBW0	867 aa		6.7	□□□□□ -1.34
RPAP3-205	ENST00000548211	ADGRF1	Q5T601	910 aa		6.7	□□□□□ -1.34
RPAP3-205	ENST00000548211	RNF111	Q6ZNA4	994 aa		6.7	□□□□□ -1.34
RPAP3-205	ENST00000548211	DAGLB	Q8NCG7	672 aa		6.7	□□□□□ -1.34
RPAP3-205	ENST00000548211	ZNF296	Q8WUU4	475 aa	Predicted RBP	6.7	□□□□□ -1.34
RPAP3-205	ENST00000548211	C20orf173	Q96LM9	149 aa		6.7	□□□□□ -1.34
RPAP3-205	ENST00000548211	ASCC2	Q9H1I8	757 aa	Predicted RBP	6.7	□□□□□ -1.34
RPAP3-205	ENST00000548211	ANTXR1	Q9H6X2	564 aa		6.7	□□□□□ -1.34
RPAP3-205	ENST00000548211	KCNQ5	Q9NR82	932 aa		6.7	□□□□□ -1.34
RPAP3-205	ENST00000548211	TCFL5	Q9UL49	500 aa		6.7	□□□□□ -1.34
RPAP3-205	ENST00000548211	TEX51	A0A1B0GUA7	166 aa		6.69	□□□□□ -1.34
RPAP3-205	ENST00000548211	CLC	Q05315	142 aa		6.69	□□□□□ -1.34
RPAP3-205	ENST00000548211	SSPN	Q14714	243 aa		6.69	□□□□□ -1.34
RPAP3-205	ENST00000548211	ENOX1	Q8TC92	643 aa	Known RBP	6.69	□□□□□ -1.34
RPAP3-205	ENST00000548211	MAP6	Q96JE9	813 aa		6.69	□□□□□ -1.34
RPAP3-205	ENST00000548211	HHIPL1	Q96JK4	782 aa		6.69	□□□□□ -1.34
RPAP3-205	ENST00000548211	LRRC3	Q9BY71	257 aa		6.69	□□□□□ -1.34
RPAP3-205	ENST00000548211	PRDM14	Q9GZV8	571 aa		6.69	□□□□□ -1.34
RPAP3-205	ENST00000548211	UBP1	Q9NZI7	540 aa		6.69	□□□□□ -1.34
RPAP3-205	ENST00000548211	GMIP	Q9P107	970 aa		6.69	□□□□□ -1.34
RPAP3-205	ENST00000548211	ADAMTS1	Q9UHI8	967 aa		6.69	□□□□□ -1.34
RPAP3-205	ENST00000548211	SEMA7A	O75326	666 aa		6.68	□□□□□ -1.34
RPAP3-205	ENST00000548211	ATE1	O95260	518 aa		6.68	□□□□□ -1.34
RPAP3-205	ENST00000548211	PRAMEF1	O95521	474 aa		6.68	□□□□□ -1.34
RPAP3-205	ENST00000548211	SYP	P08247	313 aa		6.68	□□□□□ -1.34
RPAP3-205	ENST00000548211	HOXA5	P20719	270 aa		6.68	□□□□□ -1.34
RPAP3-205	ENST00000548211	BBS9	Q3SYG4	887 aa		6.68	□□□□□ -1.34
RPAP3-205	ENST00000548211	SEZ6	Q53EL9	994 aa		6.68	□□□□□ -1.34
RPAP3-205	ENST00000548211	CEP128	Q6ZU80	1094 aa		6.68	□□□□□ -1.34
RPAP3-205	ENST00000548211	PANK1	Q8TE04	598 aa		6.68	□□□□□ -1.34
RPAP3-205	ENST00000548211	ATG4C	Q96DT6	458 aa		6.68	□□□□□ -1.34
RPAP3-205	ENST00000548211	PLCD4	Q9BRC7	762 aa		6.68	□□□□□ -1.34
RPAP3-205	ENST00000548211	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	6.68	□□□□□ -1.34
RPAP3-205	ENST00000548211	CNOT6	Q9ULM6	557 aa	Known RBP	6.68	□□□□□ -1.34
RPAP3-205	ENST00000548211	SUPT16H	Q9Y5B9	1047 aa	Known RBP	6.68	□□□□□ -1.34
RPAP3-205	ENST00000548211	OR14I1	A6ND48	311 aa		6.67	□□□□□ -1.34
RPAP3-205	ENST00000548211	BMP7	P18075	431 aa		6.67	□□□□□ -1.34
RPAP3-205	ENST00000548211	PCBP3	P57721	371 aa	Known RBP	6.67	□□□□□ -1.34
RPAP3-205	ENST00000548211	RNF4	P78317	190 aa		6.67	□□□□□ -1.34
RPAP3-205	ENST00000548211	MLEC	Q14165	292 aa		6.67	□□□□□ -1.34
RPAP3-205	ENST00000548211	SLC14A2	Q15849	920 aa		6.67	□□□□□ -1.34
RPAP3-205	ENST00000548211	CDCP2	Q5VXM1	449 aa		6.67	□□□□□ -1.34
RPAP3-205	ENST00000548211	GK5	Q6ZS86	529 aa		6.67	□□□□□ -1.34
RPAP3-205	ENST00000548211	TMEM192	Q8IY95	271 aa		6.67	□□□□□ -1.34
RPAP3-205	ENST00000548211	ZNF655	Q8N720	491 aa	Predicted RBP	6.67	□□□□□ -1.34
RPAP3-205	ENST00000548211	KRTAP4-11	Q9BYQ6	195 aa		6.67	□□□□□ -1.34
RPAP3-205	ENST00000548211	CNNM2	Q9H8M5	875 aa		6.67	□□□□□ -1.34
RPAP3-205	ENST00000548211	ROBO2	Q9HCK4	1378 aa		6.67	□□□□□ -1.34
RPAP3-205	ENST00000548211	ADAMTS20	P59510	1910 aa		6.66	□□□□□ -1.34
RPAP3-205	ENST00000548211		B8ZZF3	427 aa		6.66	□□□□□ -1.34
RPAP3-205	ENST00000548211	MEIS1	O00470	390 aa		6.66	□□□□□ -1.34
RPAP3-205	ENST00000548211	PRRG2	O14669	202 aa		6.66	□□□□□ -1.34
RPAP3-205	ENST00000548211	NRDC	O43847	1150 aa		6.66	□□□□□ -1.34
RPAP3-205	ENST00000548211	BUD31	P41223	144 aa	Predicted RBP	6.66	□□□□□ -1.34
RPAP3-205	ENST00000548211	EPHB3	P54753	998 aa		6.66	□□□□□ -1.34
RPAP3-205	ENST00000548211	LINC00116	Q8NCU8	138 aa		6.66	□□□□□ -1.34
RPAP3-205	ENST00000548211	GZF1	Q9H116	711 aa	Predicted RBP	6.66	□□□□□ -1.34
RPAP3-205	ENST00000548211	EHMT1	Q9H9B1	1298 aa		6.66	□□□□□ -1.34
RPAP3-205	ENST00000548211	MBD1	Q9UIS9	605 aa	Predicted RBP	6.66	□□□□□ -1.34
RPAP3-205	ENST00000548211	GGT7	Q9UJ14	662 aa		6.66	□□□□□ -1.34
RPAP3-205	ENST00000548211	KCTD3	Q9Y597	815 aa		6.66	□□□□□ -1.34
RPAP3-205	ENST00000548211	NCAN	O14594	1321 aa		6.66	□□□□□ -1.34
RPAP3-205	ENST00000548211	SSU72P8	A0A1W2PR75	194 aa		6.65	□□□□□ -1.34
RPAP3-205	ENST00000548211	SIGLEC6	O43699	453 aa		6.65	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms