RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 RPAP2Q8IXW5 612 aaPredicted RBP24.15■■□□□ 1.46
GATC-202ENST00000548171 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.15■■□□□ 1.46
GATC-202ENST00000548171 DIS3Q9Y2L1 958 aaKnown RBP24.15■■□□□ 1.46
GATC-202ENST00000548171 LAMA2P24043 3122 aaKnown RBP24.14■■□□□ 1.46
GATC-202ENST00000548171 HMMRO75330 724 aa24.14■■□□□ 1.45
GATC-202ENST00000548171 MBD4O95243 580 aa24.14■■□□□ 1.45
GATC-202ENST00000548171 C9orf50Q5SZB4 431 aa24.14■■□□□ 1.45
GATC-202ENST00000548171 C12orf60Q5U649 245 aa24.14■■□□□ 1.45
GATC-202ENST00000548171 CLEC10AQ8IUN9 316 aa24.14■■□□□ 1.45
GATC-202ENST00000548171 FERMT2Q96AC1 680 aa24.14■■□□□ 1.45
GATC-202ENST00000548171 DDRGK1Q96HY6 314 aa24.14■■□□□ 1.45
GATC-202ENST00000548171 CDX2Q99626 313 aaPredicted RBP24.14■■□□□ 1.45
GATC-202ENST00000548171 SEMA6BQ9H3T3 888 aa24.14■■□□□ 1.45
GATC-202ENST00000548171 KANSL2Q9H9L4 492 aa24.14■■□□□ 1.45
GATC-202ENST00000548171 XPNPEP3Q9NQH7 507 aa24.14■■□□□ 1.45
GATC-202ENST00000548171 PAG1Q9NWQ8 432 aa24.14■■□□□ 1.45
GATC-202ENST00000548171 TACC3Q9Y6A5 838 aa24.14■■□□□ 1.45
GATC-202ENST00000548171 MS4A1P11836 297 aa24.13■■□□□ 1.45
GATC-202ENST00000548171 COPB2P35606 906 aa24.13■■□□□ 1.45
GATC-202ENST00000548171 ADD2P35612 726 aa24.13■■□□□ 1.45
GATC-202ENST00000548171 CDK8P49336 464 aa24.13■■□□□ 1.45
GATC-202ENST00000548171 HNRNPUQ00839 825 aaKnown RBP eCLIP24.13■■□□□ 1.45
GATC-202ENST00000548171 KCTD2Q14681 263 aa24.13■■□□□ 1.45
GATC-202ENST00000548171 RNF180Q86T96 592 aa24.13■■□□□ 1.45
GATC-202ENST00000548171 RIOX2Q8IUF8 465 aa24.13■■□□□ 1.45
GATC-202ENST00000548171 PANK1Q8TE04 598 aa24.13■■□□□ 1.45
GATC-202ENST00000548171 MMP19Q99542 508 aa24.13■■□□□ 1.45
GATC-202ENST00000548171 TINF2Q9BSI4 451 aa24.13■■□□□ 1.45
GATC-202ENST00000548171 TRIM43BA6NCK2 446 aa24.12■■□□□ 1.45
GATC-202ENST00000548171 APBB1O00213 710 aa24.12■■□□□ 1.45
GATC-202ENST00000548171 TLE2Q04725 743 aa24.12■■□□□ 1.45
GATC-202ENST00000548171 SAMD1Q6SPF0 538 aaPredicted RBP24.12■■□□□ 1.45
GATC-202ENST00000548171 C16orf86Q6ZW13 317 aa24.12■■□□□ 1.45
GATC-202ENST00000548171 TRIM43Q96BQ3 446 aaPredicted RBP24.12■■□□□ 1.45
GATC-202ENST00000548171 GOPCQ9HD26 462 aa24.12■■□□□ 1.45
GATC-202ENST00000548171 PRKAB2O43741 272 aa24.11■■□□□ 1.45
GATC-202ENST00000548171 RAB11FIP3O75154 756 aa24.11■■□□□ 1.45
GATC-202ENST00000548171 EEF2P13639 858 aaKnown RBP24.11■■□□□ 1.45
GATC-202ENST00000548171 STAT3P40763 770 aa24.11■■□□□ 1.45
GATC-202ENST00000548171 SH3RF1Q7Z6J0 888 aa24.11■■□□□ 1.45
GATC-202ENST00000548171 GREB1LQ9C091 1923 aaPredicted RBP24.1■■□□□ 1.45
GATC-202ENST00000548171 USP17L12C9JPN9 530 aa24.1■■□□□ 1.45
GATC-202ENST00000548171 USP17L21D6R901 530 aa24.1■■□□□ 1.45
GATC-202ENST00000548171 CLTBP09497 229 aa24.1■■□□□ 1.45
GATC-202ENST00000548171 ATP5JP18859 108 aa24.1■■□□□ 1.45
GATC-202ENST00000548171 UBE3CQ15386 1083 aa24.1■■□□□ 1.45
GATC-202ENST00000548171 PPP1R9AQ9ULJ8 1098 aa24.1■■□□□ 1.45
GATC-202ENST00000548171 VWA5AO00534 786 aa24.09■■□□□ 1.45
GATC-202ENST00000548171 PGK2P07205 417 aa24.09■■□□□ 1.45
GATC-202ENST00000548171 AKR1A1P14550 325 aa24.09■■□□□ 1.45
GATC-202ENST00000548171 ZNF792Q3KQV3 632 aa24.09■■□□□ 1.45
GATC-202ENST00000548171 MAFAQ8NHW3 353 aaPredicted RBP24.09■■□□□ 1.45
GATC-202ENST00000548171 TMEM265A0A087WTH1 108 aa24.08■■□□□ 1.45
GATC-202ENST00000548171 KIAA0355O15063 1070 aa24.08■■□□□ 1.45
GATC-202ENST00000548171 MSL3Q8N5Y2 521 aaKnown RBP24.08■■□□□ 1.45
GATC-202ENST00000548171 HAUS7Q99871 368 aa24.08■■□□□ 1.45
GATC-202ENST00000548171 BOLA2Q9H3K6 86 aa24.08■■□□□ 1.45
GATC-202ENST00000548171 FBXO28Q9NVF7 368 aa24.08■■□□□ 1.45
GATC-202ENST00000548171 ZNF214Q9UL59 606 aaPredicted RBP24.08■■□□□ 1.45
GATC-202ENST00000548171 CNPY2Q9Y2B0 182 aa24.08■■□□□ 1.45
GATC-202ENST00000548171 CYP2D7A0A087X1C5 515 aa24.07■■□□□ 1.44
GATC-202ENST00000548171 A0A1W2PQ45 241 aaPredicted RBP24.07■■□□□ 1.44
GATC-202ENST00000548171 A0A1W2PQY0 241 aa24.07■■□□□ 1.44
GATC-202ENST00000548171 PGK1P00558 417 aa24.07■■□□□ 1.44
GATC-202ENST00000548171 ZNF865P0CJ78 1059 aaPredicted RBP24.07■■□□□ 1.44
GATC-202ENST00000548171 TSEN34Q9BSV6 310 aaKnown RBP24.07■■□□□ 1.44
GATC-202ENST00000548171 TTYH1Q9H313 450 aaPredicted RBP24.07■■□□□ 1.44
GATC-202ENST00000548171 SLC4A4Q9Y6R1 1079 aa24.07■■□□□ 1.44
GATC-202ENST00000548171 ZBED9Q6R2W3 1325 aa24.07■■□□□ 1.44
GATC-202ENST00000548171 RAG1P15918 1043 aa24.06■■□□□ 1.44
GATC-202ENST00000548171 SLFNL1Q499Z3 407 aa24.06■■□□□ 1.44
GATC-202ENST00000548171 ZSCAN25Q6NSZ9 544 aa24.06■■□□□ 1.44
GATC-202ENST00000548171 REPS2Q8NFH8 660 aa24.06■■□□□ 1.44
GATC-202ENST00000548171 RNPC3Q96LT9 517 aaKnown RBP24.06■■□□□ 1.44
GATC-202ENST00000548171 TOX2Q96NM4 488 aa24.06■■□□□ 1.44
GATC-202ENST00000548171 DDX19BQ9UMR2 479 aa24.06■■□□□ 1.44
GATC-202ENST00000548171 MYH4Q9Y623 1939 aa24.06■■□□□ 1.44
GATC-202ENST00000548171 SMIM22K7EJ46 135 aa24.05■■□□□ 1.44
GATC-202ENST00000548171 PQBP1O60828 265 aaKnown RBP24.05■■□□□ 1.44
GATC-202ENST00000548171 FAM83BQ5T0W9 1011 aa24.05■■□□□ 1.44
GATC-202ENST00000548171 CTR9Q6PD62 1173 aa24.05■■□□□ 1.44
GATC-202ENST00000548171 ANKRD33Q7Z3H0 272 aa24.05■■□□□ 1.44
GATC-202ENST00000548171 SIRT2Q8IXJ6 389 aa24.05■■□□□ 1.44
GATC-202ENST00000548171 BCL11AQ9H165 835 aa24.05■■□□□ 1.44
GATC-202ENST00000548171 ARPP21Q9UBL0 812 aaPredicted RBP24.05■■□□□ 1.44
GATC-202ENST00000548171 RAD21O60216 631 aa24.04■■□□□ 1.44
GATC-202ENST00000548171 ADAMTS4O75173 837 aa24.04■■□□□ 1.44
GATC-202ENST00000548171 TAL1P17542 331 aaPredicted RBP24.04■■□□□ 1.44
GATC-202ENST00000548171 ITGB8P26012 769 aa24.04■■□□□ 1.44
GATC-202ENST00000548171 FPGSQ05932 587 aa24.04■■□□□ 1.44
GATC-202ENST00000548171 NUP133Q8WUM0 1156 aa24.04■■□□□ 1.44
GATC-202ENST00000548171 MYLIPQ8WY64 445 aa24.04■■□□□ 1.44
GATC-202ENST00000548171 SLF1Q9BQI6 1058 aa24.04■■□□□ 1.44
GATC-202ENST00000548171 TEX13BQ9BXU2 312 aa24.04■■□□□ 1.44
GATC-202ENST00000548171 CHMP4BQ9H444 224 aaKnown RBP24.04■■□□□ 1.44
GATC-202ENST00000548171 ZBTB40Q9NUA8 1239 aa24.04■■□□□ 1.44
GATC-202ENST00000548171 TMEM39AQ9NV64 488 aa24.04■■□□□ 1.44
GATC-202ENST00000548171 SYNGAP1Q96PV0 1343 aa24.04■■□□□ 1.44
GATC-202ENST00000548171 MOXD2PA6NHM9 499 aa24.03■■□□□ 1.44
GATC-202ENST00000548171 FOSL2P15408 326 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms