RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.48□□□□□ -0.25
RNF41-203ENST00000547967 RAD21O60216 631 aa13.47□□□□□ -0.25
RNF41-203ENST00000547967 RAD17O75943 681 aa13.47□□□□□ -0.25
RNF41-203ENST00000547967 DPEP1P16444 411 aa13.47□□□□□ -0.25
RNF41-203ENST00000547967 PTGDRQ13258 359 aa13.47□□□□□ -0.25
RNF41-203ENST00000547967 SHROOM1Q2M3G4 852 aaPredicted RBP13.47□□□□□ -0.25
RNF41-203ENST00000547967 CEP57L1Q8IYX8 460 aa13.47□□□□□ -0.25
RNF41-203ENST00000547967 EPSTI1Q96J88 318 aa13.47□□□□□ -0.25
RNF41-203ENST00000547967 ZNF277Q9NRM2 450 aaPredicted RBP13.47□□□□□ -0.25
RNF41-203ENST00000547967 AOPEPQ8N6M6 819 aa13.47□□□□□ -0.25
RNF41-203ENST00000547967 FAM198AQ9UFP1 575 aa13.47□□□□□ -0.25
RNF41-203ENST00000547967 RGPD3A6NKT7 1758 aaPredicted RBP13.47□□□□□ -0.25
RNF41-203ENST00000547967 RGPD4Q7Z3J3 1758 aa13.47□□□□□ -0.25
RNF41-203ENST00000547967 VWA3AA6NCI4 1184 aa13.46□□□□□ -0.25
RNF41-203ENST00000547967 ZBTB7AO95365 584 aa13.46□□□□□ -0.25
RNF41-203ENST00000547967 CAVIN2O95810 425 aa13.46□□□□□ -0.25
RNF41-203ENST00000547967 CALML3P27482 149 aa13.46□□□□□ -0.25
RNF41-203ENST00000547967 KRBA2Q6ZNG9 492 aa13.46□□□□□ -0.25
RNF41-203ENST00000547967 METTL16Q86W50 562 aaKnown RBP13.46□□□□□ -0.25
RNF41-203ENST00000547967 TIGD1Q96MW7 591 aa13.46□□□□□ -0.25
RNF41-203ENST00000547967 PIGSQ96S52 555 aa13.46□□□□□ -0.25
RNF41-203ENST00000547967 TTC12Q9H892 705 aaPredicted RBP13.46□□□□□ -0.25
RNF41-203ENST00000547967 GPCPD1Q9NPB8 672 aa13.46□□□□□ -0.25
RNF41-203ENST00000547967 PCDHA4Q9UN74 947 aa13.46□□□□□ -0.25
RNF41-203ENST00000547967 FAM237AA0A1B0GTK4 181 aa13.46□□□□□ -0.26
RNF41-203ENST00000547967 STXBP3O00186 592 aa13.46□□□□□ -0.26
RNF41-203ENST00000547967 PDHBP11177 359 aa13.46□□□□□ -0.26
RNF41-203ENST00000547967 CLCN1P35523 988 aa13.46□□□□□ -0.26
RNF41-203ENST00000547967 FOXP4Q8IVH2 680 aaPredicted RBP13.46□□□□□ -0.26
RNF41-203ENST00000547967 DHX40Q8IX18 779 aaKnown RBP13.46□□□□□ -0.26
RNF41-203ENST00000547967 GRAMD1CQ8IYS0 662 aa13.46□□□□□ -0.26
RNF41-203ENST00000547967 PRMT6Q96LA8 375 aaPredicted RBP13.46□□□□□ -0.26
RNF41-203ENST00000547967 DNAJC18Q9H819 358 aa13.46□□□□□ -0.26
RNF41-203ENST00000547967 BARHL2Q9NY43 387 aa13.46□□□□□ -0.26
RNF41-203ENST00000547967 SWAP70Q9UH65 585 aa13.46□□□□□ -0.26
RNF41-203ENST00000547967 SERTAD1Q9UHV2 236 aa13.46□□□□□ -0.26
RNF41-203ENST00000547967 TTLL1O95922 423 aa13.45□□□□□ -0.26
RNF41-203ENST00000547967 NAPAP54920 295 aa13.45□□□□□ -0.26
RNF41-203ENST00000547967 CFAP100Q494V2 611 aa13.45□□□□□ -0.26
RNF41-203ENST00000547967 CC2D2BQ6DHV5 1058 aa13.45□□□□□ -0.26
RNF41-203ENST00000547967 DRC7Q8IY82 874 aa13.45□□□□□ -0.26
RNF41-203ENST00000547967 LARGE2Q8N3Y3 721 aa13.45□□□□□ -0.26
RNF41-203ENST00000547967 SUPT20HQ8NEM7 779 aa13.45□□□□□ -0.26
RNF41-203ENST00000547967 RRP36Q96EU6 259 aaKnown RBP13.45□□□□□ -0.26
RNF41-203ENST00000547967 LZTS2Q9BRK4 669 aa13.45□□□□□ -0.26
RNF41-203ENST00000547967 NAT10Q9H0A0 1025 aaKnown RBP13.45□□□□□ -0.26
RNF41-203ENST00000547967 PPP1R1BQ9UD71 204 aaPredicted RBP13.45□□□□□ -0.26
RNF41-203ENST00000547967 SEC63Q9UGP8 760 aaKnown RBP13.45□□□□□ -0.26
RNF41-203ENST00000547967 ZKSCAN5Q9Y2L8 839 aa13.45□□□□□ -0.26
RNF41-203ENST00000547967 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.45□□□□□ -0.26
RNF41-203ENST00000547967 CCDC194A0A1B0GVG4 234 aa13.45□□□□□ -0.26
RNF41-203ENST00000547967 KCNA3P22001 575 aa13.45□□□□□ -0.26
RNF41-203ENST00000547967 SH3BP5LQ7L8J4 393 aa13.45□□□□□ -0.26
RNF41-203ENST00000547967 SPZ1Q9BXG8 430 aa13.45□□□□□ -0.26
RNF41-203ENST00000547967 SH3GLB2Q9NR46 395 aa13.45□□□□□ -0.26
RNF41-203ENST00000547967 SERPINA10Q9UK55 444 aa13.45□□□□□ -0.26
RNF41-203ENST00000547967 ZBTB12Q9Y330 459 aaPredicted RBP13.45□□□□□ -0.26
RNF41-203ENST00000547967 FOCADQ5VW36 1801 aa13.45□□□□□ -0.26
RNF41-203ENST00000547967 CCDC93Q567U6 631 aa13.44□□□□□ -0.26
RNF41-203ENST00000547967 ZNF579Q8NAF0 562 aaKnown RBP13.44□□□□□ -0.26
RNF41-203ENST00000547967 MRIQ9BWK5 157 aa13.44□□□□□ -0.26
RNF41-203ENST00000547967 PI4KBQ9UBF8 816 aa13.44□□□□□ -0.26
RNF41-203ENST00000547967 PCDHA6Q9UN73 950 aa13.44□□□□□ -0.26
RNF41-203ENST00000547967 ATF5Q9Y2D1 282 aaPredicted RBP13.44□□□□□ -0.26
RNF41-203ENST00000547967 PCDHA8Q9Y5H6 950 aa13.44□□□□□ -0.26
RNF41-203ENST00000547967 PCDHA5Q9Y5H7 936 aa13.44□□□□□ -0.26
RNF41-203ENST00000547967 NOVP48745 357 aa13.44□□□□□ -0.26
RNF41-203ENST00000547967 NLRP12P59046 1061 aa13.44□□□□□ -0.26
RNF41-203ENST00000547967 FKBP1AP62942 108 aaKnown RBP13.44□□□□□ -0.26
RNF41-203ENST00000547967 INF2Q27J81 1249 aa13.44□□□□□ -0.26
RNF41-203ENST00000547967 CCDC148Q8NFR7 591 aa13.44□□□□□ -0.26
RNF41-203ENST00000547967 SYMPKQ92797 1274 aaKnown RBP13.44□□□□□ -0.26
RNF41-203ENST00000547967 DHX58Q96C10 678 aa13.44□□□□□ -0.26
RNF41-203ENST00000547967 TRIM34Q9BYJ4 488 aa13.44□□□□□ -0.26
RNF41-203ENST00000547967 QSER1Q2KHR3 1735 aa13.44□□□□□ -0.26
RNF41-203ENST00000547967 A0A087X0B3 334 aa13.43□□□□□ -0.26
RNF41-203ENST00000547967 IGKV6D-41A0A0C4DH26 115 aa13.43□□□□□ -0.26
RNF41-203ENST00000547967 SMCO2A6NFE2 343 aa13.43□□□□□ -0.26
RNF41-203ENST00000547967 SLC16A2P36021 539 aa13.43□□□□□ -0.26
RNF41-203ENST00000547967 HDLBPQ00341 1268 aaKnown RBP13.43□□□□□ -0.26
RNF41-203ENST00000547967 CERKLQ49MI3 558 aaPredicted RBP13.43□□□□□ -0.26
RNF41-203ENST00000547967 TTBK2Q6IQ55 1244 aa13.43□□□□□ -0.26
RNF41-203ENST00000547967 KCTD1Q719H9 257 aa13.43□□□□□ -0.26
RNF41-203ENST00000547967 IDI2Q9BXS1 227 aa13.43□□□□□ -0.26
RNF41-203ENST00000547967 CLRN2A0PK11 232 aa13.43□□□□□ -0.26
RNF41-203ENST00000547967 PRR29P0C7W0 189 aa13.43□□□□□ -0.26
RNF41-203ENST00000547967 CDC25AP30304 524 aa13.43□□□□□ -0.26
RNF41-203ENST00000547967 ZNF75DP51815 510 aa13.43□□□□□ -0.26
RNF41-203ENST00000547967 ATP2C1P98194 919 aaPredicted RBP13.43□□□□□ -0.26
RNF41-203ENST00000547967 RTKN2Q8IZC4 609 aa13.43□□□□□ -0.26
RNF41-203ENST00000547967 COA7Q96BR5 231 aa13.43□□□□□ -0.26
RNF41-203ENST00000547967 DHX36Q9H2U1 1008 aaKnown RBP13.43□□□□□ -0.26
RNF41-203ENST00000547967 PLIN4Q96Q06 1357 aa13.43□□□□□ -0.26
RNF41-203ENST00000547967 M0R2N6 131 aa13.42□□□□□ -0.26
RNF41-203ENST00000547967 PSMD14O00487 310 aa13.42□□□□□ -0.26
RNF41-203ENST00000547967 GDF11O95390 407 aa13.42□□□□□ -0.26
RNF41-203ENST00000547967 AFMP43652 599 aa13.42□□□□□ -0.26
RNF41-203ENST00000547967 MDM2Q00987 491 aaPredicted RBP13.42□□□□□ -0.26
RNF41-203ENST00000547967 POSTNQ15063 836 aa13.42□□□□□ -0.26
RNF41-203ENST00000547967 CCDC96Q2M329 555 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms