RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 LSRQ86X29 649 aaPredicted RBP4.31□□□□□ -1.72
CEP290-204ENST00000547926 DMRTB1Q96MA1 342 aa4.31□□□□□ -1.72
CEP290-204ENST00000547926 SMPD4Q9NXE4 827 aa4.31□□□□□ -1.72
CEP290-204ENST00000547926 UPK3BL1B0FP48 263 aa4.3□□□□□ -1.72
CEP290-204ENST00000547926 UPK3BL2E5RIL1 263 aa4.3□□□□□ -1.72
CEP290-204ENST00000547926 DSC3Q14574 896 aa4.3□□□□□ -1.72
CEP290-204ENST00000547926 VWA3BQ502W6 1294 aa4.3□□□□□ -1.72
CEP290-204ENST00000547926 ALKBH8Q96BT7 664 aaKnown RBP4.3□□□□□ -1.72
CEP290-204ENST00000547926 COX4I2Q96KJ9 171 aa4.3□□□□□ -1.72
CEP290-204ENST00000547926 SETDB2Q96T68 719 aa4.3□□□□□ -1.72
CEP290-204ENST00000547926 OSBPL7Q9BZF2 842 aa4.3□□□□□ -1.72
CEP290-204ENST00000547926 PRDM14Q9GZV8 571 aa4.3□□□□□ -1.72
CEP290-204ENST00000547926 TREHO43280 583 aa4.3□□□□□ -1.72
CEP290-204ENST00000547926 RBM15Q96T37 977 aaKnown RBP eCLIP4.3□□□□□ -1.72
CEP290-204ENST00000547926 PALD1Q9ULE6 856 aa4.3□□□□□ -1.72
CEP290-204ENST00000547926 HRKO00198 91 aa4.29□□□□□ -1.72
CEP290-204ENST00000547926 PLA2G1BP04054 148 aaKnown RBP4.29□□□□□ -1.72
CEP290-204ENST00000547926 RPL10P27635 214 aaKnown RBP4.29□□□□□ -1.72
CEP290-204ENST00000547926 CEP128Q6ZU80 1094 aa4.29□□□□□ -1.72
CEP290-204ENST00000547926 SPRED1Q7Z699 444 aa4.29□□□□□ -1.72
CEP290-204ENST00000547926 MRPL41Q8IXM3 137 aaKnown RBP4.29□□□□□ -1.72
CEP290-204ENST00000547926 ZNF526Q8TF50 670 aaPredicted RBP4.29□□□□□ -1.72
CEP290-204ENST00000547926 ACSF2Q96CM8 615 aaPredicted RBP4.29□□□□□ -1.72
CEP290-204ENST00000547926 HHIPL1Q96JK4 782 aa4.29□□□□□ -1.72
CEP290-204ENST00000547926 TMEM87BQ96K49 555 aa4.29□□□□□ -1.72
CEP290-204ENST00000547926 C8orf49Q96NF6 230 aa4.29□□□□□ -1.72
CEP290-204ENST00000547926 IGSF5Q9NSI5 407 aa4.29□□□□□ -1.72
CEP290-204ENST00000547926 PPP4R2Q9NY27 417 aa4.29□□□□□ -1.72
CEP290-204ENST00000547926 CYP8B1Q9UNU6 501 aa4.29□□□□□ -1.72
CEP290-204ENST00000547926 CEP131Q9UPN4 1083 aa4.29□□□□□ -1.72
CEP290-204ENST00000547926 PCDHB5Q9Y5E4 795 aa4.29□□□□□ -1.72
CEP290-204ENST00000547926 TMEM82A0PJX8 343 aa4.28□□□□□ -1.72
CEP290-204ENST00000547926 CNR2P34972 360 aa4.28□□□□□ -1.72
CEP290-204ENST00000547926 SEPT6Q14141 434 aa4.28□□□□□ -1.72
CEP290-204ENST00000547926 HCFC2Q9Y5Z7 792 aa4.28□□□□□ -1.72
CEP290-204ENST00000547926 PATL2C9JE40 543 aaKnown RBP4.28□□□□□ -1.72
CEP290-204ENST00000547926 PGRP06401 933 aa4.28□□□□□ -1.72
CEP290-204ENST00000547926 ETV3P41162 512 aa4.28□□□□□ -1.72
CEP290-204ENST00000547926 LRRC14Q15048 493 aa4.28□□□□□ -1.72
CEP290-204ENST00000547926 SND1Q7KZF4 910 aaKnown RBP eCLIP4.28□□□□□ -1.72
CEP290-204ENST00000547926 ASB16Q96NS5 453 aa4.28□□□□□ -1.72
CEP290-204ENST00000547926 PNMA6FA0A0J9YX94 578 aa4.27□□□□□ -1.73
CEP290-204ENST00000547926 NUDT19A8MXV4 375 aa4.27□□□□□ -1.73
CEP290-204ENST00000547926 NRDCO43847 1150 aa4.27□□□□□ -1.73
CEP290-204ENST00000547926 ZNF20P17024 532 aa4.27□□□□□ -1.73
CEP290-204ENST00000547926 IGFBP6P24592 240 aaPredicted RBP4.27□□□□□ -1.73
CEP290-204ENST00000547926 DUSP4Q13115 394 aa4.27□□□□□ -1.73
CEP290-204ENST00000547926 CORINQ9Y5Q5 1042 aa4.27□□□□□ -1.73
CEP290-204ENST00000547926 SNCAIPQ9Y6H5 919 aa4.27□□□□□ -1.73
CEP290-204ENST00000547926 MAPK8P45983 427 aa4.27□□□□□ -1.73
CEP290-204ENST00000547926 USHBP1Q8N6Y0 703 aa4.27□□□□□ -1.73
CEP290-204ENST00000547926 WWC3Q9ULE0 1092 aa4.27□□□□□ -1.73
CEP290-204ENST00000547926 ITGB3P05106 788 aa4.26□□□□□ -1.73
CEP290-204ENST00000547926 ACVRL1P37023 503 aa4.26□□□□□ -1.73
CEP290-204ENST00000547926 ERVFRD-1P60508 538 aa4.26□□□□□ -1.73
CEP290-204ENST00000547926 FMR1Q06787 632 aaKnown RBP eCLIP4.26□□□□□ -1.73
CEP290-204ENST00000547926 ENOX2Q16206 610 aaKnown RBP4.26□□□□□ -1.73
CEP290-204ENST00000547926 WAPLQ7Z5K2 1190 aa4.26□□□□□ -1.73
CEP290-204ENST00000547926 MCATQ8IVS2 390 aaKnown RBP4.26□□□□□ -1.73
CEP290-204ENST00000547926 ZSCAN29Q8IWY8 852 aaPredicted RBP4.26□□□□□ -1.73
CEP290-204ENST00000547926 MAP6Q96JE9 813 aa4.26□□□□□ -1.73
CEP290-204ENST00000547926 FOXP3Q9BZS1 431 aa4.26□□□□□ -1.73
CEP290-204ENST00000547926 CRTAC1Q9NQ79 661 aa4.26□□□□□ -1.73
CEP290-204ENST00000547926 SAMM50Q9Y512 469 aa4.26□□□□□ -1.73
CEP290-204ENST00000547926 CEBPAP49715 358 aaPredicted RBP4.25□□□□□ -1.73
CEP290-204ENST00000547926 CPZQ66K79 652 aa4.25□□□□□ -1.73
CEP290-204ENST00000547926 CEP44Q9C0F1 390 aa4.25□□□□□ -1.73
CEP290-204ENST00000547926 GZF1Q9H116 711 aaPredicted RBP4.25□□□□□ -1.73
CEP290-204ENST00000547926 SLITRK6Q9H5Y7 841 aa4.25□□□□□ -1.73
CEP290-204ENST00000547926 USP40Q9NVE5 1235 aa4.25□□□□□ -1.73
CEP290-204ENST00000547926 ING1Q9UK53 422 aaPredicted RBP4.25□□□□□ -1.73
CEP290-204ENST00000547926 RBM47A0AV96 593 aaKnown RBP4.25□□□□□ -1.73
CEP290-204ENST00000547926 C1QTNF3-AMACRE9PGA6 284 aa4.25□□□□□ -1.73
CEP290-204ENST00000547926 P4HBP07237 508 aaKnown RBP4.25□□□□□ -1.73
CEP290-204ENST00000547926 DLX2Q07687 328 aaPredicted RBP4.25□□□□□ -1.73
CEP290-204ENST00000547926 SLC14A2Q15849 920 aa4.25□□□□□ -1.73
CEP290-204ENST00000547926 LIPIQ6XZB0 460 aa4.25□□□□□ -1.73
CEP290-204ENST00000547926 FNIP1Q8TF40 1166 aa4.25□□□□□ -1.73
CEP290-204ENST00000547926 ZMYM5Q9UJ78 669 aa4.25□□□□□ -1.73
CEP290-204ENST00000547926 ANKRD33BA6NCL7 494 aa4.24□□□□□ -1.73
CEP290-204ENST00000547926 FKTNO75072 461 aa4.24□□□□□ -1.73
CEP290-204ENST00000547926 PNLIPP16233 465 aa4.24□□□□□ -1.73
CEP290-204ENST00000547926 TACR2P21452 398 aa4.24□□□□□ -1.73
CEP290-204ENST00000547926 ZNF200P98182 395 aaPredicted RBP4.24□□□□□ -1.73
CEP290-204ENST00000547926 RAB3GAP1Q15042 981 aa4.24□□□□□ -1.73
CEP290-204ENST00000547926 SLC6A19Q695T7 634 aa4.24□□□□□ -1.73
CEP290-204ENST00000547926 SYTL4Q96C24 671 aaPredicted RBP4.24□□□□□ -1.73
CEP290-204ENST00000547926 SUSD2Q9UGT4 822 aa4.24□□□□□ -1.73
CEP290-204ENST00000547926 CNOT11Q9UKZ1 510 aaKnown RBP4.24□□□□□ -1.73
CEP290-204ENST00000547926 MINPP1Q9UNW1 487 aa4.24□□□□□ -1.73
CEP290-204ENST00000547926 GSTT1P30711 240 aa4.24□□□□□ -1.73
CEP290-204ENST00000547926 RPTNQ6XPR3 784 aa4.24□□□□□ -1.73
CEP290-204ENST00000547926 NOBOXO60393 691 aa4.23□□□□□ -1.73
CEP290-204ENST00000547926 RTP1P59025 263 aa4.23□□□□□ -1.73
CEP290-204ENST00000547926 DNAJC14Q6Y2X3 702 aaPredicted RBP4.23□□□□□ -1.73
CEP290-204ENST00000547926 SH3RF3Q8TEJ3 882 aaPredicted RBP4.23□□□□□ -1.73
CEP290-204ENST00000547926 C1QTNF3Q9BXJ4 246 aa4.23□□□□□ -1.73
CEP290-204ENST00000547926 RNF19AQ9NV58 838 aa4.23□□□□□ -1.73
CEP290-204ENST00000547926 KCNH3Q9ULD8 1083 aa4.23□□□□□ -1.73
CEP290-204ENST00000547926 IRS2Q9Y4H2 1338 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms