RNA–Protein interactions for RNA: ENST00000547877.5

LETMD1-212, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 2,020 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-212ENST00000547877 KIAA1683Q9H0B3 1180 aa17.31■□□□□ 0.36
LETMD1-212ENST00000547877 VCPKMTQ9H867 229 aa17.31■□□□□ 0.36
LETMD1-212ENST00000547877 MAD2L2Q9UI95 211 aa17.31■□□□□ 0.36
LETMD1-212ENST00000547877 ZDHHC9Q9Y397 364 aa17.31■□□□□ 0.36
LETMD1-212ENST00000547877 AFG3L2Q9Y4W6 797 aa17.31■□□□□ 0.36
LETMD1-212ENST00000547877 CCDC196A0A1B0GTZ2 297 aa17.3■□□□□ 0.36
LETMD1-212ENST00000547877 SPDYE5A6NIY4 337 aa17.3■□□□□ 0.36
LETMD1-212ENST00000547877 DHX16O60231 1041 aaKnown RBP17.3■□□□□ 0.36
LETMD1-212ENST00000547877 DTNBO60941 627 aa17.3■□□□□ 0.36
LETMD1-212ENST00000547877 GOLGA8HP0CJ92 632 aa17.3■□□□□ 0.36
LETMD1-212ENST00000547877 PDIA4P13667 645 aaKnown RBP17.3■□□□□ 0.36
LETMD1-212ENST00000547877 KIF5BP33176 963 aa17.3■□□□□ 0.36
LETMD1-212ENST00000547877 BACE1P56817 501 aa17.3■□□□□ 0.36
LETMD1-212ENST00000547877 PPATQ06203 517 aa17.3■□□□□ 0.36
LETMD1-212ENST00000547877 KIAA1755Q5JYT7 1200 aa17.3■□□□□ 0.36
LETMD1-212ENST00000547877 STAG2Q8N3U4 1231 aa17.3■□□□□ 0.36
LETMD1-212ENST00000547877 CPLX1O14810 134 aa17.3■□□□□ 0.36
LETMD1-212ENST00000547877 PARP1P09874 1014 aaKnown RBP17.3■□□□□ 0.36
LETMD1-212ENST00000547877 SLC1A4P43007 532 aa17.3■□□□□ 0.36
LETMD1-212ENST00000547877 MRE11P49959 708 aa17.3■□□□□ 0.36
LETMD1-212ENST00000547877 CMTR1Q8N1G2 835 aaKnown RBP17.3■□□□□ 0.36
LETMD1-212ENST00000547877 SLC10A4Q96EP9 437 aa17.3■□□□□ 0.36
LETMD1-212ENST00000547877 GMCL1Q96IK5 515 aa17.3■□□□□ 0.36
LETMD1-212ENST00000547877 RBM28Q9NW13 759 aaKnown RBP17.3■□□□□ 0.36
LETMD1-212ENST00000547877 FRMPD2Q68DX3 1309 aaPredicted RBP17.29■□□□□ 0.36
LETMD1-212ENST00000547877 PALM3A6NDB9 673 aaPredicted RBP17.29■□□□□ 0.36
LETMD1-212ENST00000547877 IRF6O14896 467 aa17.29■□□□□ 0.36
LETMD1-212ENST00000547877 CTDNEP1O95476 244 aa17.29■□□□□ 0.36
LETMD1-212ENST00000547877 DGKZQ13574 1117 aa17.29■□□□□ 0.36
LETMD1-212ENST00000547877 OPTNQ96CV9 577 aa17.29■□□□□ 0.36
LETMD1-212ENST00000547877 PPFIA3O75145 1194 aa17.28■□□□□ 0.36
LETMD1-212ENST00000547877 PLEKHA8P1O95397 391 aa17.28■□□□□ 0.36
LETMD1-212ENST00000547877 USP14P54578 494 aa17.28■□□□□ 0.36
LETMD1-212ENST00000547877 HUNKP57058 714 aa17.28■□□□□ 0.36
LETMD1-212ENST00000547877 ZNF543Q08ER8 600 aa17.28■□□□□ 0.36
LETMD1-212ENST00000547877 FSTL1Q12841 308 aa17.28■□□□□ 0.36
LETMD1-212ENST00000547877 NTRK3Q16288 839 aa17.28■□□□□ 0.36
LETMD1-212ENST00000547877 ASPRV1Q53RT3 343 aa17.28■□□□□ 0.36
LETMD1-212ENST00000547877 KCTD1Q719H9 257 aa17.28■□□□□ 0.36
LETMD1-212ENST00000547877 CCDC82Q8N4S0 544 aa17.28■□□□□ 0.36
LETMD1-212ENST00000547877 DCAF4Q8WV16 495 aa17.28■□□□□ 0.36
LETMD1-212ENST00000547877 NUP88Q99567 741 aaPredicted RBP17.28■□□□□ 0.36
LETMD1-212ENST00000547877 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.28■□□□□ 0.36
LETMD1-212ENST00000547877 HMGCS2P54868 508 aa17.28■□□□□ 0.36
LETMD1-212ENST00000547877 CCDC96Q2M329 555 aa17.28■□□□□ 0.36
LETMD1-212ENST00000547877 GPATCH4Q5T3I0 446 aaKnown RBP17.28■□□□□ 0.36
LETMD1-212ENST00000547877 TMTC3Q6ZXV5 915 aa17.28■□□□□ 0.36
LETMD1-212ENST00000547877 NSUN7Q8NE18 718 aaKnown RBP17.28■□□□□ 0.36
LETMD1-212ENST00000547877 LPAR1Q92633 364 aa17.28■□□□□ 0.36
LETMD1-212ENST00000547877 EMILIN3Q9NT22 766 aa17.28■□□□□ 0.36
LETMD1-212ENST00000547877 LMBRD1Q9NUN5 540 aa17.28■□□□□ 0.36
LETMD1-212ENST00000547877 C19orf81C9J6K1 198 aa17.27■□□□□ 0.36
LETMD1-212ENST00000547877 KLRF2D3W0D1 207 aa17.27■□□□□ 0.36
LETMD1-212ENST00000547877 PPIL2Q13356 520 aa17.27■□□□□ 0.36
LETMD1-212ENST00000547877 SAPCD2Q86UD0 394 aa17.27■□□□□ 0.36
LETMD1-212ENST00000547877 SRBD1Q8N5C6 995 aaKnown RBP17.27■□□□□ 0.36
LETMD1-212ENST00000547877 LLPHQ9BRT6 129 aaKnown RBP17.27■□□□□ 0.36
LETMD1-212ENST00000547877 WDR33Q9C0J8 1336 aaKnown RBP17.27■□□□□ 0.35
LETMD1-212ENST00000547877 JAK2O60674 1132 aa17.26■□□□□ 0.35
LETMD1-212ENST00000547877 BMP3P12645 472 aa17.26■□□□□ 0.35
LETMD1-212ENST00000547877 IFNAR1P17181 557 aa17.26■□□□□ 0.35
LETMD1-212ENST00000547877 GNAQP50148 359 aa17.26■□□□□ 0.35
LETMD1-212ENST00000547877 CPLX2Q6PUV4 134 aaKnown RBP17.26■□□□□ 0.35
LETMD1-212ENST00000547877 NBPF11Q86T75 865 aa17.26■□□□□ 0.35
LETMD1-212ENST00000547877 PHKBQ93100 1093 aa17.26■□□□□ 0.35
LETMD1-212ENST00000547877 GPCPD1Q9NPB8 672 aa17.26■□□□□ 0.35
LETMD1-212ENST00000547877 PTPRFP10586 1907 aa17.26■□□□□ 0.35
LETMD1-212ENST00000547877 PTPDC1A2A3K4 754 aa17.26■□□□□ 0.35
LETMD1-212ENST00000547877 CDKL5O76039 1030 aa17.26■□□□□ 0.35
LETMD1-212ENST00000547877 GJA5P36382 358 aa17.26■□□□□ 0.35
LETMD1-212ENST00000547877 FUT2Q10981 343 aa17.26■□□□□ 0.35
LETMD1-212ENST00000547877 PKP1Q13835 747 aa17.26■□□□□ 0.35
LETMD1-212ENST00000547877 FAM83BQ5T0W9 1011 aa17.26■□□□□ 0.35
LETMD1-212ENST00000547877 CPVLQ9H3G5 476 aa17.26■□□□□ 0.35
LETMD1-212ENST00000547877 DDX49Q9Y6V7 483 aaKnown RBP17.26■□□□□ 0.35
LETMD1-212ENST00000547877 VCAM1P19320 739 aa17.25■□□□□ 0.35
LETMD1-212ENST00000547877 MCTP1Q6DN14 999 aa17.25■□□□□ 0.35
LETMD1-212ENST00000547877 TTBK2Q6IQ55 1244 aa17.25■□□□□ 0.35
LETMD1-212ENST00000547877 SMARCC2Q8TAQ2 1214 aa17.25■□□□□ 0.35
LETMD1-212ENST00000547877 DDX11Q96FC9 970 aa17.25■□□□□ 0.35
LETMD1-212ENST00000547877 UBA5Q9GZZ9 404 aa17.25■□□□□ 0.35
LETMD1-212ENST00000547877 KCNH4Q9UQ05 1017 aa17.25■□□□□ 0.35
LETMD1-212ENST00000547877 SMC3Q9UQE7 1217 aa17.25■□□□□ 0.35
LETMD1-212ENST00000547877 BAZ2BQ9UIF8 2168 aaKnown RBP17.25■□□□□ 0.35
LETMD1-212ENST00000547877 TMEM88BA6NKF7 163 aa17.25■□□□□ 0.35
LETMD1-212ENST00000547877 CXCL11O14625 94 aa17.25■□□□□ 0.35
LETMD1-212ENST00000547877 WDR46O15213 610 aaKnown RBP17.25■□□□□ 0.35
LETMD1-212ENST00000547877 SLC35G1Q2M3R5 365 aa17.25■□□□□ 0.35
LETMD1-212ENST00000547877 SH3D19Q5HYK7 790 aa17.25■□□□□ 0.35
LETMD1-212ENST00000547877 C12orf42Q96LP6 360 aa17.25■□□□□ 0.35
LETMD1-212ENST00000547877 LZTS2Q9BRK4 669 aa17.25■□□□□ 0.35
LETMD1-212ENST00000547877 GZF1Q9H116 711 aaPredicted RBP17.25■□□□□ 0.35
LETMD1-212ENST00000547877 A0A0G2JLL6 359 aaPredicted RBP17.24■□□□□ 0.35
LETMD1-212ENST00000547877 TMEM232C9JQI7 657 aa17.24■□□□□ 0.35
LETMD1-212ENST00000547877 CYTH3O43739 400 aa17.24■□□□□ 0.35
LETMD1-212ENST00000547877 GJB2P29033 226 aa17.24■□□□□ 0.35
LETMD1-212ENST00000547877 SLC16A2P36021 539 aa17.24■□□□□ 0.35
LETMD1-212ENST00000547877 PRRT2Q7Z6L0 340 aaPredicted RBP17.24■□□□□ 0.35
LETMD1-212ENST00000547877 WNK4Q96J92 1243 aa17.24■□□□□ 0.35
LETMD1-212ENST00000547877 SLC26A6Q9BXS9 759 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms