RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 RNF186Q9NXI6 227 aa19.13■□□□□ 0.65
CHMP1A-204ENST00000547687 GJA5P36382 358 aa19.12■□□□□ 0.65
CHMP1A-204ENST00000547687 SPRYD7Q5W111 196 aa19.12■□□□□ 0.65
CHMP1A-204ENST00000547687 SLC44A5Q8NCS7 719 aa19.12■□□□□ 0.65
CHMP1A-204ENST00000547687 TNMDQ9H2S6 317 aa19.12■□□□□ 0.65
CHMP1A-204ENST00000547687 FAM217BQ9NTX9 383 aaPredicted RBP19.12■□□□□ 0.65
CHMP1A-204ENST00000547687 TSPY2A6NKD2 308 aa19.12■□□□□ 0.65
CHMP1A-204ENST00000547687 ESPNB1AK53 854 aa19.12■□□□□ 0.65
CHMP1A-204ENST00000547687 NMT2O60551 498 aa19.12■□□□□ 0.65
CHMP1A-204ENST00000547687 NR1I2O75469 434 aa19.12■□□□□ 0.65
CHMP1A-204ENST00000547687 CCDC192P0DO97 292 aa19.12■□□□□ 0.65
CHMP1A-204ENST00000547687 FKBP1CQ5VVH2 108 aa19.12■□□□□ 0.65
CHMP1A-204ENST00000547687 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.12■□□□□ 0.65
CHMP1A-204ENST00000547687 FAM151AQ8WW52 585 aa19.12■□□□□ 0.65
CHMP1A-204ENST00000547687 ALG1Q9BT22 464 aa19.12■□□□□ 0.65
CHMP1A-204ENST00000547687 CLSTN2Q9H4D0 955 aa19.12■□□□□ 0.65
CHMP1A-204ENST00000547687 MKNK2Q9HBH9 465 aa19.12■□□□□ 0.65
CHMP1A-204ENST00000547687 GJB4Q9NTQ9 266 aa19.12■□□□□ 0.65
CHMP1A-204ENST00000547687 CENPFP49454 3210 aa19.11■□□□□ 0.65
CHMP1A-204ENST00000547687 VGLL4Q14135 290 aa19.11■□□□□ 0.65
CHMP1A-204ENST00000547687 NTRK3Q16288 839 aa19.11■□□□□ 0.65
CHMP1A-204ENST00000547687 BRAPQ7Z569 592 aa19.11■□□□□ 0.65
CHMP1A-204ENST00000547687 ANKRD13AQ8IZ07 590 aa19.11■□□□□ 0.65
CHMP1A-204ENST00000547687 PHKBQ93100 1093 aa19.11■□□□□ 0.65
CHMP1A-204ENST00000547687 ZKSCAN4Q969J2 545 aaPredicted RBP19.11■□□□□ 0.65
CHMP1A-204ENST00000547687 WNK4Q96J92 1243 aa19.11■□□□□ 0.65
CHMP1A-204ENST00000547687 PRDM10Q9NQV6 1147 aa19.11■□□□□ 0.65
CHMP1A-204ENST00000547687 RTEL1Q9NZ71 1219 aa19.11■□□□□ 0.65
CHMP1A-204ENST00000547687 WRNIP1Q96S55 665 aa19.1■□□□□ 0.65
CHMP1A-204ENST00000547687 TFAP4Q01664 338 aa19.1■□□□□ 0.65
CHMP1A-204ENST00000547687 IFIT1BQ5T764 474 aaKnown RBP19.1■□□□□ 0.65
CHMP1A-204ENST00000547687 CCAR1Q8IX12 1150 aaKnown RBP19.1■□□□□ 0.65
CHMP1A-204ENST00000547687 ZNF654Q8IZM8 581 aa19.1■□□□□ 0.65
CHMP1A-204ENST00000547687 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.1■□□□□ 0.658e-7■■□□□ 12.1
CHMP1A-204ENST00000547687 CDK8P49336 464 aa19.09■□□□□ 0.65
CHMP1A-204ENST00000547687 C16orf86Q6ZW13 317 aa19.09■□□□□ 0.65
CHMP1A-204ENST00000547687 SH3BP5LQ7L8J4 393 aa19.09■□□□□ 0.65
CHMP1A-204ENST00000547687 OPTNQ96CV9 577 aa19.09■□□□□ 0.65
CHMP1A-204ENST00000547687 AIFM3Q96NN9 605 aa19.09■□□□□ 0.65
CHMP1A-204ENST00000547687 MYH15Q9Y2K3 1946 aa19.09■□□□□ 0.65
CHMP1A-204ENST00000547687 ME1P48163 572 aa19.08■□□□□ 0.65
CHMP1A-204ENST00000547687 MAP3K9P80192 1104 aa19.08■□□□□ 0.65
CHMP1A-204ENST00000547687 SSRP1Q08945 709 aaKnown RBP19.08■□□□□ 0.65
CHMP1A-204ENST00000547687 HS1BP3Q53T59 392 aa19.08■□□□□ 0.65
CHMP1A-204ENST00000547687 ZSCAN29Q8IWY8 852 aaPredicted RBP19.08■□□□□ 0.65
CHMP1A-204ENST00000547687 ZNF444Q8N0Y2 327 aaPredicted RBP19.08■□□□□ 0.65
CHMP1A-204ENST00000547687 OSBPL5Q9H0X9 879 aaPredicted RBP19.08■□□□□ 0.65
CHMP1A-204ENST00000547687 KIF28PB7ZC32 967 aa19.08■□□□□ 0.64
CHMP1A-204ENST00000547687 CA12O43570 354 aa19.08■□□□□ 0.64
CHMP1A-204ENST00000547687 CAPN15O75808 1086 aa19.08■□□□□ 0.64
CHMP1A-204ENST00000547687 TBC1D8O95759 1140 aa19.08■□□□□ 0.64
CHMP1A-204ENST00000547687 RASA1P20936 1047 aa19.08■□□□□ 0.64
CHMP1A-204ENST00000547687 INPP5BP32019 993 aa19.08■□□□□ 0.64
CHMP1A-204ENST00000547687 MYSM1Q5VVJ2 828 aa19.08■□□□□ 0.64
CHMP1A-204ENST00000547687 RBM43Q6ZSC3 357 aaKnown RBP19.08■□□□□ 0.64
CHMP1A-204ENST00000547687 CKAP2LQ8IYA6 745 aa19.08■□□□□ 0.64
CHMP1A-204ENST00000547687 NUP133Q8WUM0 1156 aa19.08■□□□□ 0.64
CHMP1A-204ENST00000547687 NID2Q14112 1375 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 DDTLA6NHG4 134 aaPredicted RBP19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 RTN1Q16799 776 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 KRT40Q6A162 431 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 OTUD5Q96G74 571 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 IDI2Q9BXS1 227 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 SLC26A6Q9BXS9 759 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 ZNF287Q9HBT7 754 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 IL17RBQ9NRM6 502 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 CLIC4Q9Y696 253 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 STK36Q9NRP7 1315 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 FMNL1O95466 1100 aaPredicted RBP19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 TSPY3P0CV98 308 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 TSPY8P0CW00 308 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 IFNAR1P17181 557 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 NT5C2P49902 561 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 TYRO3Q06418 890 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 TRIM29Q14134 588 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 FANCBQ8NB91 859 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 LINC00301Q8NCQ3 95 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 POLR3EQ9NVU0 708 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 CSADQ9Y600 493 aa19.07■□□□□ 0.64
CHMP1A-204ENST00000547687 TM4SF4P48230 202 aa19.06■□□□□ 0.64
CHMP1A-204ENST00000547687 RCAN1P53805 252 aa19.06■□□□□ 0.64
CHMP1A-204ENST00000547687 STK38Q15208 465 aa19.06■□□□□ 0.64
CHMP1A-204ENST00000547687 RCSD1Q6JBY9 416 aa19.06■□□□□ 0.64
CHMP1A-204ENST00000547687 CCDC73Q6ZRK6 1079 aa19.06■□□□□ 0.64
CHMP1A-204ENST00000547687 WASF1Q92558 559 aa19.06■□□□□ 0.64
CHMP1A-204ENST00000547687 R3HDMLQ9H3Y0 253 aa19.06■□□□□ 0.64
CHMP1A-204ENST00000547687 PCDHA7Q9UN72 937 aa19.06■□□□□ 0.64
CHMP1A-204ENST00000547687 SNCAIPQ9Y6H5 919 aa19.06■□□□□ 0.64
CHMP1A-204ENST00000547687 CCDC196A0A1B0GTZ2 297 aa19.05■□□□□ 0.64
CHMP1A-204ENST00000547687 YEATS4O95619 227 aa19.05■□□□□ 0.64
CHMP1A-204ENST00000547687 SF3A1Q15459 793 aaKnown RBP19.05■□□□□ 0.64
CHMP1A-204ENST00000547687 CATIPQ7Z7H3 387 aa19.05■□□□□ 0.64
CHMP1A-204ENST00000547687 GOLPH3LQ9H4A5 285 aa19.05■□□□□ 0.64
CHMP1A-204ENST00000547687 FAM196BA6NMK8 535 aa19.05■□□□□ 0.64
CHMP1A-204ENST00000547687 IGF2BP3O00425 579 aaKnown RBP eCLIP19.05■□□□□ 0.649e-11■■□□□ 12.9
CHMP1A-204ENST00000547687 ZBTB48P10074 688 aaPredicted RBP19.05■□□□□ 0.64
CHMP1A-204ENST00000547687 CLCN1P35523 988 aa19.05■□□□□ 0.64
CHMP1A-204ENST00000547687 GABPAQ06546 454 aa19.05■□□□□ 0.64
CHMP1A-204ENST00000547687 TROAPQ12815 778 aa19.05■□□□□ 0.64
CHMP1A-204ENST00000547687 DCAF15Q66K64 600 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms