RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 IDH1O75874 414 aaKnown RBP13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 NDUFA10O95299 355 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 EXOSC10Q01780 885 aaKnown RBP13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 LAMB3Q13751 1172 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 HLTFQ14527 1009 aaKnown RBP eCLIP13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 RCSD1Q6JBY9 416 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 TLDC1Q6P9B6 456 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 KSR2Q6VAB6 950 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 MLKLQ8NB16 471 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 CUL5Q93034 780 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 TSC22D3Q99576 134 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 MTMR7Q9Y216 660 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 HPSEQ9Y251 543 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 MYH15Q9Y2K3 1946 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 ATP6V1G2O95670 118 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 FAM107AO95990 144 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 VAV2P52735 878 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 SLC8A3P57103 927 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 KIF23Q02241 960 aaPredicted RBP13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 SLC39A6Q13433 755 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 QPCTQ16769 361 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 IQCEQ6IPM2 695 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 NLRP3Q96P20 1036 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 ACTR5Q9H9F9 607 aaPredicted RBP13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 ABHD10Q9NUJ1 306 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 ZSCAN5CA6NGD5 496 aaPredicted RBP13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 E7EWF7 191 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 NEFHP12036 1026 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 UBXN1Q04323 297 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 GRIN1Q05586 938 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 VPS37DQ86XT2 251 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 TRIM22Q8IYM9 498 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 TMEM165Q9HC07 324 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 GNAT1P11488 350 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 OR2W6PQ8NHA6 318 aa13.29□□□□□ -0.28
RBFOX1-208ENST00000547372 FAM208AQ9UK61 1670 aaKnown RBP13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 KIDINS220Q9ULH0 1771 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 A0A1B0GTH6 734 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 ERICH2A1L162 156 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 ZNF609O15014 1411 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 CCDC96Q2M329 555 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 ANKRD20A8PQ5CZ79 823 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 ANKRD13CQ8N6S4 541 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 MYL10Q9BUA6 226 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 PAPOLBQ9NRJ5 636 aaKnown RBP13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 MYO1AQ9UBC5 1043 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 PIK3C2BO00750 1634 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 TARSL2A2RTX5 802 aaKnown RBP13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 A6NNZ2 444 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 KRT86O43790 486 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 CDKL5O76039 1030 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 FAM153BP0C7A2 387 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 RAB27AP51159 221 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 GUCY2DQ02846 1103 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 TUBB8Q3ZCM7 444 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 FAM153CQ494X1 144 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 C8orf74Q6P047 294 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 CCDC63Q8NA47 563 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 AENQ8WTP8 325 aaKnown RBP13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 HOOK2Q96ED9 719 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 MED15Q96RN5 788 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 FAM153AQ9UHL3 310 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 RPS6KL1Q9Y6S9 549 aa13.28□□□□□ -0.28
RBFOX1-208ENST00000547372 GMNCA6NCL1 334 aa13.27□□□□□ -0.28
RBFOX1-208ENST00000547372 POLE2P56282 527 aa13.27□□□□□ -0.28
RBFOX1-208ENST00000547372 COPS6Q7L5N1 327 aa13.27□□□□□ -0.28
RBFOX1-208ENST00000547372 LINS1Q8NG48 757 aa13.27□□□□□ -0.28
RBFOX1-208ENST00000547372 SEC16BQ96JE7 1060 aa13.27□□□□□ -0.28
RBFOX1-208ENST00000547372 EPB41L5Q9HCM4 733 aa13.27□□□□□ -0.28
RBFOX1-208ENST00000547372 CEP126Q9P2H0 1117 aa13.27□□□□□ -0.28
RBFOX1-208ENST00000547372 GOLGA8AA7E2F4 631 aa13.27□□□□□ -0.28
RBFOX1-208ENST00000547372 PDHA1P08559 390 aa13.27□□□□□ -0.28
RBFOX1-208ENST00000547372 SKOR1P84550 965 aa13.27□□□□□ -0.28
RBFOX1-208ENST00000547372 ENOX2Q16206 610 aaKnown RBP13.27□□□□□ -0.28
RBFOX1-208ENST00000547372 RESP18Q5W5W9 173 aa13.27□□□□□ -0.28
RBFOX1-208ENST00000547372 CCDC170Q8IYT3 715 aa13.27□□□□□ -0.28
RBFOX1-208ENST00000547372 TRIM58Q8NG06 486 aa13.27□□□□□ -0.28
RBFOX1-208ENST00000547372 CCDC47Q96A33 483 aaKnown RBP13.27□□□□□ -0.28
RBFOX1-208ENST00000547372 DLC1Q96QB1 1528 aa13.27□□□□□ -0.29
RBFOX1-208ENST00000547372 ANKRD33BA6NCL7 494 aa13.27□□□□□ -0.29
RBFOX1-208ENST00000547372 TTC36A6NLP5 189 aa13.27□□□□□ -0.29
RBFOX1-208ENST00000547372 ATP5JP18859 108 aa13.27□□□□□ -0.29
RBFOX1-208ENST00000547372 CARSP49589 748 aaKnown RBP13.27□□□□□ -0.29
RBFOX1-208ENST00000547372 PAPOLAP51003 745 aaKnown RBP13.27□□□□□ -0.29
RBFOX1-208ENST00000547372 EPHB4P54760 987 aa13.27□□□□□ -0.29
RBFOX1-208ENST00000547372 ELF3P78545 371 aaPredicted RBP13.27□□□□□ -0.29
RBFOX1-208ENST00000547372 MXRA7P84157 204 aa13.27□□□□□ -0.29
RBFOX1-208ENST00000547372 MIS18BP1Q6P0N0 1132 aa13.27□□□□□ -0.29
RBFOX1-208ENST00000547372 LMBR1LQ6UX01 489 aa13.27□□□□□ -0.29
RBFOX1-208ENST00000547372 YTHDF3Q7Z739 585 aaKnown RBP13.27□□□□□ -0.29
RBFOX1-208ENST00000547372 B4GALNT2Q8NHY0 566 aa13.27□□□□□ -0.29
RBFOX1-208ENST00000547372 AGXT2Q9BYV1 514 aa13.27□□□□□ -0.29
RBFOX1-208ENST00000547372 LACRTQ9GZZ8 138 aa13.27□□□□□ -0.29
RBFOX1-208ENST00000547372 BATF3Q9NR55 127 aa13.27□□□□□ -0.29
RBFOX1-208ENST00000547372 LEMD3Q9Y2U8 911 aa13.27□□□□□ -0.29
RBFOX1-208ENST00000547372 ZMYM6O95789 1325 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 SYNRGQ9UMZ2 1314 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 A0A1B0GVG6 124 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 ALS2CLQ60I27 953 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 PAG1Q9NWQ8 432 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms