RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 AFG3L2Q9Y4W6 797 aa18.4■□□□□ 0.54
TRAFD1-203ENST00000547063 PASKQ96RG2 1323 aa18.4■□□□□ 0.54
TRAFD1-203ENST00000547063 PHIPQ8WWQ0 1821 aa18.39■□□□□ 0.54
TRAFD1-203ENST00000547063 PTPDC1A2A3K4 754 aa18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 KLRF2D3W0D1 207 aa18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 CXCL11O14625 94 aa18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 BMP3P12645 472 aa18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 FMR1Q06787 632 aaKnown RBP eCLIP18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 SSRP1Q08945 709 aaKnown RBP18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 PPIL2Q13356 520 aa18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 NTRK3Q16288 839 aa18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 MOB2Q70IA6 237 aa18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 CCDC84Q86UT8 332 aaPredicted RBP18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 POTEDQ86YR6 584 aa18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 ZNF784Q8NCA9 323 aaPredicted RBP18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 SMARCC2Q8TAQ2 1214 aa18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 WASF1Q92558 559 aa18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 SPZ1Q9BXG8 430 aa18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 RNF26Q9BY78 433 aaPredicted RBP18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 TMOD4Q9NZQ9 345 aa18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 STK36Q9NRP7 1315 aa18.39■□□□□ 0.53
TRAFD1-203ENST00000547063 TRIM75PA6NK02 468 aa18.38■□□□□ 0.53
TRAFD1-203ENST00000547063 WDR46O15213 610 aaKnown RBP18.38■□□□□ 0.53
TRAFD1-203ENST00000547063 PDCP20941 246 aa18.38■□□□□ 0.53
TRAFD1-203ENST00000547063 MTMR2Q13614 643 aa18.38■□□□□ 0.53
TRAFD1-203ENST00000547063 CST9Q5W186 159 aa18.38■□□□□ 0.53
TRAFD1-203ENST00000547063 FAM184AQ8NB25 1140 aa18.38■□□□□ 0.53
TRAFD1-203ENST00000547063 SPRYD3Q8NCJ5 442 aa18.38■□□□□ 0.53
TRAFD1-203ENST00000547063 CLMNQ96JQ2 1002 aa18.38■□□□□ 0.53
TRAFD1-203ENST00000547063 C12orf42Q96LP6 360 aa18.38■□□□□ 0.53
TRAFD1-203ENST00000547063 ISY1Q9ULR0 285 aaKnown RBP18.38■□□□□ 0.53
TRAFD1-203ENST00000547063 FMNL1O95466 1100 aaPredicted RBP18.37■□□□□ 0.53
TRAFD1-203ENST00000547063 CTDNEP1O95476 244 aa18.37■□□□□ 0.53
TRAFD1-203ENST00000547063 GJB2P29033 226 aa18.37■□□□□ 0.53
TRAFD1-203ENST00000547063 ZYXQ15942 572 aaKnown RBP18.37■□□□□ 0.53
TRAFD1-203ENST00000547063 SH3D19Q5HYK7 790 aa18.37■□□□□ 0.53
TRAFD1-203ENST00000547063 STAG2Q8N3U4 1231 aa18.37■□□□□ 0.53
TRAFD1-203ENST00000547063 CHURC1Q8WUH1 139 aa18.37■□□□□ 0.53
TRAFD1-203ENST00000547063 OTUD5Q96G74 571 aa18.37■□□□□ 0.53
TRAFD1-203ENST00000547063 FOXD4L1Q9NU39 408 aa18.37■□□□□ 0.53
TRAFD1-203ENST00000547063 PRPF3O43395 683 aaKnown RBP18.36■□□□□ 0.53
TRAFD1-203ENST00000547063 PLA2G6O60733 806 aa18.36■□□□□ 0.53
TRAFD1-203ENST00000547063 PLEKHA8P1O95397 391 aa18.36■□□□□ 0.53
TRAFD1-203ENST00000547063 DEXIO95424 95 aa18.36■□□□□ 0.53
TRAFD1-203ENST00000547063 GOLGA8HP0CJ92 632 aa18.36■□□□□ 0.53
TRAFD1-203ENST00000547063 FRMPD2Q68DX3 1309 aaPredicted RBP18.36■□□□□ 0.53
TRAFD1-203ENST00000547063 FAM160B2Q86V87 743 aa18.36■□□□□ 0.53
TRAFD1-203ENST00000547063 SPICE1Q8N0Z3 855 aa18.36■□□□□ 0.53
TRAFD1-203ENST00000547063 SRBD1Q8N5C6 995 aaKnown RBP18.36■□□□□ 0.53
TRAFD1-203ENST00000547063 OPTNQ96CV9 577 aa18.36■□□□□ 0.53
TRAFD1-203ENST00000547063 SLC26A6Q9BXS9 759 aa18.36■□□□□ 0.53
TRAFD1-203ENST00000547063 GPCPD1Q9NPB8 672 aa18.36■□□□□ 0.53
TRAFD1-203ENST00000547063 ORC3Q9UBD5 711 aaPredicted RBP18.36■□□□□ 0.53
TRAFD1-203ENST00000547063 KCNH4Q9UQ05 1017 aa18.36■□□□□ 0.53
TRAFD1-203ENST00000547063 STAT2P52630 851 aa18.35■□□□□ 0.53
TRAFD1-203ENST00000547063 HMGCS2P54868 508 aa18.35■□□□□ 0.53
TRAFD1-203ENST00000547063 HUNKP57058 714 aa18.35■□□□□ 0.53
TRAFD1-203ENST00000547063 FUT2Q10981 343 aa18.35■□□□□ 0.53
TRAFD1-203ENST00000547063 IKQ13123 557 aaPredicted RBP18.35■□□□□ 0.53
TRAFD1-203ENST00000547063 BTNL9Q6UXG8 535 aa18.35■□□□□ 0.53
TRAFD1-203ENST00000547063 KCTD1Q719H9 257 aa18.35■□□□□ 0.53
TRAFD1-203ENST00000547063 NBPF11Q86T75 865 aa18.35■□□□□ 0.53
TRAFD1-203ENST00000547063 PROCA1Q8NCQ7 364 aaPredicted RBP18.35■□□□□ 0.53
TRAFD1-203ENST00000547063 RGS22Q8NE09 1264 aa18.35■□□□□ 0.53
TRAFD1-203ENST00000547063 RRP36Q96EU6 259 aaKnown RBP18.35■□□□□ 0.53
TRAFD1-203ENST00000547063 RIOX1Q9H6W3 641 aa18.35■□□□□ 0.53
TRAFD1-203ENST00000547063 SEC63Q9UGP8 760 aaKnown RBP18.35■□□□□ 0.53
TRAFD1-203ENST00000547063 FEM1BQ9UK73 627 aa18.35■□□□□ 0.53
TRAFD1-203ENST00000547063 CNTNAP5Q8WYK1 1306 aa18.34■□□□□ 0.53
TRAFD1-203ENST00000547063 TMEM232C9JQI7 657 aa18.34■□□□□ 0.53
TRAFD1-203ENST00000547063 JAK2O60674 1132 aa18.34■□□□□ 0.53
TRAFD1-203ENST00000547063 ZBTB48P10074 688 aaPredicted RBP18.34■□□□□ 0.53
TRAFD1-203ENST00000547063 XBP1P17861 261 aa18.34■□□□□ 0.53
TRAFD1-203ENST00000547063 VCAM1P19320 739 aa18.34■□□□□ 0.53
TRAFD1-203ENST00000547063 SNAPC2Q13487 334 aa18.34■□□□□ 0.53
TRAFD1-203ENST00000547063 FAM83BQ5T0W9 1011 aa18.34■□□□□ 0.53
TRAFD1-203ENST00000547063 FASTKD5Q7L8L6 764 aaKnown RBP18.34■□□□□ 0.53
TRAFD1-203ENST00000547063 CCDC82Q8N4S0 544 aa18.34■□□□□ 0.53
TRAFD1-203ENST00000547063 PHKBQ93100 1093 aa18.34■□□□□ 0.53
TRAFD1-203ENST00000547063 DDX11Q96FC9 970 aa18.34■□□□□ 0.53
TRAFD1-203ENST00000547063 EMILIN3Q9NT22 766 aa18.34■□□□□ 0.53
TRAFD1-203ENST00000547063 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.34■□□□□ 0.53
TRAFD1-203ENST00000547063 CIZ1Q9ULV3 898 aaPredicted RBP18.34■□□□□ 0.53
TRAFD1-203ENST00000547063 MYH6P13533 1939 aa18.33■□□□□ 0.53
TRAFD1-203ENST00000547063 A0A0G2JLL6 359 aaPredicted RBP18.33■□□□□ 0.52
TRAFD1-203ENST00000547063 IRF6O14896 467 aa18.33■□□□□ 0.52
TRAFD1-203ENST00000547063 TRAF1Q13077 416 aa18.33■□□□□ 0.52
TRAFD1-203ENST00000547063 LARP1BQ659C4 914 aaKnown RBP18.33■□□□□ 0.52
TRAFD1-203ENST00000547063 PRRT2Q7Z6L0 340 aaPredicted RBP18.33■□□□□ 0.52
TRAFD1-203ENST00000547063 FAM177A1Q8N128 213 aaPredicted RBP18.33■□□□□ 0.52
TRAFD1-203ENST00000547063 CMTR1Q8N1G2 835 aaKnown RBP18.33■□□□□ 0.52
TRAFD1-203ENST00000547063 WNK4Q96J92 1243 aa18.33■□□□□ 0.52
TRAFD1-203ENST00000547063 NUP88Q99567 741 aaPredicted RBP18.33■□□□□ 0.52
TRAFD1-203ENST00000547063 V9GY48 417 aaPredicted RBP18.33■□□□□ 0.52
TRAFD1-203ENST00000547063 PTPRFP10586 1907 aa18.33■□□□□ 0.52
TRAFD1-203ENST00000547063 TMEM88BA6NKF7 163 aa18.32■□□□□ 0.52
TRAFD1-203ENST00000547063 hCG_1984214I3L0E3 225 aa18.32■□□□□ 0.52
TRAFD1-203ENST00000547063 FDX1P10109 184 aa18.32■□□□□ 0.52
TRAFD1-203ENST00000547063 GTF2A2P52657 109 aa18.32■□□□□ 0.52
TRAFD1-203ENST00000547063 PABPC4Q13310 644 aaKnown RBP eCLIP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms