RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 RNF113AO15541 343 aaKnown RBP22.39■■□□□ 1.17
CHERP-204ENST00000546538 STRNO43815 780 aa22.39■■□□□ 1.17
CHERP-204ENST00000546538 PLS1Q14651 629 aa22.39■■□□□ 1.17
CHERP-204ENST00000546538 SAMD1Q6SPF0 538 aaPredicted RBP22.39■■□□□ 1.17
CHERP-204ENST00000546538 AMOTL1Q8IY63 956 aa22.39■■□□□ 1.17
CHERP-204ENST00000546538 SH2D4AQ9H788 454 aa22.39■■□□□ 1.17
CHERP-204ENST00000546538 GPAA1O43292 621 aa22.38■■□□□ 1.17
CHERP-204ENST00000546538 DPP9Q86TI2 863 aa22.38■■□□□ 1.17
CHERP-204ENST00000546538 NCAPG2Q86XI2 1143 aa22.38■■□□□ 1.17
CHERP-204ENST00000546538 SEC62Q99442 399 aaKnown RBP22.38■■□□□ 1.17
CHERP-204ENST00000546538 NUP88Q99567 741 aaPredicted RBP22.38■■□□□ 1.17
CHERP-204ENST00000546538 MROH8Q9H579 483 aa22.38■■□□□ 1.17
CHERP-204ENST00000546538 CNGA1P29973 690 aa22.37■■□□□ 1.17
CHERP-204ENST00000546538 PRAMEF19Q5SWL8 479 aa22.37■■□□□ 1.17
CHERP-204ENST00000546538 FAM83BQ5T0W9 1011 aa22.37■■□□□ 1.17
CHERP-204ENST00000546538 ANO1Q5XXA6 986 aa22.37■■□□□ 1.17
CHERP-204ENST00000546538 GIMAP6Q6P9H5 292 aa22.37■■□□□ 1.17
CHERP-204ENST00000546538 DDRGK1Q96HY6 314 aa22.37■■□□□ 1.17
CHERP-204ENST00000546538 ZNF214Q9UL59 606 aaPredicted RBP22.37■■□□□ 1.17
CHERP-204ENST00000546538 IGKV6D-41A0A0C4DH26 115 aa22.36■■□□□ 1.17
CHERP-204ENST00000546538 ABRAQ8N0Z2 381 aa22.36■■□□□ 1.17
CHERP-204ENST00000546538 MAML3Q96JK9 1138 aa22.36■■□□□ 1.17
CHERP-204ENST00000546538 PPP1R9AQ9ULJ8 1098 aa22.36■■□□□ 1.17
CHERP-204ENST00000546538 MINDY4BA8MYZ0 360 aa22.35■■□□□ 1.17
CHERP-204ENST00000546538 VWA5AO00534 786 aa22.35■■□□□ 1.17
CHERP-204ENST00000546538 SENP6Q9GZR1 1112 aaPredicted RBP22.35■■□□□ 1.17
CHERP-204ENST00000546538 SALL3Q9BXA9 1300 aa22.34■■□□□ 1.17
CHERP-204ENST00000546538 RIOX2Q8IUF8 465 aa22.34■■□□□ 1.17
CHERP-204ENST00000546538 GOPCQ9HD26 462 aa22.34■■□□□ 1.17
CHERP-204ENST00000546538 DNM1LO00429 736 aa22.33■■□□□ 1.17
CHERP-204ENST00000546538 FOXP2O15409 715 aa22.33■■□□□ 1.17
CHERP-204ENST00000546538 MSCO60682 206 aa22.33■■□□□ 1.17
CHERP-204ENST00000546538 PRDM1O75626 825 aa22.33■■□□□ 1.17
CHERP-204ENST00000546538 PGK2P07205 417 aa22.33■■□□□ 1.17
CHERP-204ENST00000546538 GJC2Q5T442 439 aaPredicted RBP22.33■■□□□ 1.17
CHERP-204ENST00000546538 GPATCH3Q96I76 525 aa22.33■■□□□ 1.17
CHERP-204ENST00000546538 SMCHD1A6NHR9 2005 aa22.33■■□□□ 1.17
CHERP-204ENST00000546538 PLXNA1Q9UIW2 1896 aa22.33■■□□□ 1.17
CHERP-204ENST00000546538 TTC41PQ6P2S7 1318 aa22.33■■□□□ 1.16
CHERP-204ENST00000546538 MYH4Q9Y623 1939 aa22.32■■□□□ 1.16
CHERP-204ENST00000546538 NDUFB10O96000 172 aa22.32■■□□□ 1.16
CHERP-204ENST00000546538 ZFYP08048 801 aaPredicted RBP22.32■■□□□ 1.16
CHERP-204ENST00000546538 ATN1P54259 1190 aaPredicted RBP22.32■■□□□ 1.16
CHERP-204ENST00000546538 NYAP2Q9P242 653 aa22.32■■□□□ 1.16
CHERP-204ENST00000546538 A0A0C4DFX4 3053 aa22.32■■□□□ 1.16
CHERP-204ENST00000546538 F5H6K3 240 aa22.31■■□□□ 1.16
CHERP-204ENST00000546538 SEPT4O43236 478 aa22.31■■□□□ 1.16
CHERP-204ENST00000546538 RAD21O60216 631 aa22.31■■□□□ 1.16
CHERP-204ENST00000546538 SLC25A27O95847 323 aa22.31■■□□□ 1.16
CHERP-204ENST00000546538 FCER1AP12319 257 aa22.31■■□□□ 1.16
CHERP-204ENST00000546538 KLRC3Q07444 240 aa22.31■■□□□ 1.16
CHERP-204ENST00000546538 ZNF792Q3KQV3 632 aa22.31■■□□□ 1.16
CHERP-204ENST00000546538 IFNL3Q8IZI9 196 aa22.31■■□□□ 1.16
CHERP-204ENST00000546538 MKNK2Q9HBH9 465 aa22.31■■□□□ 1.16
CHERP-204ENST00000546538 RIPK3Q9Y572 518 aa22.31■■□□□ 1.16
CHERP-204ENST00000546538 TAL1P17542 331 aaPredicted RBP22.31■■□□□ 1.16
CHERP-204ENST00000546538 STAT3P40763 770 aa22.31■■□□□ 1.16
CHERP-204ENST00000546538 CEP95Q96GE4 821 aa22.31■■□□□ 1.16
CHERP-204ENST00000546538 MMP19Q99542 508 aa22.31■■□□□ 1.16
CHERP-204ENST00000546538 LTBP2Q14767 1821 aa22.3■■□□□ 1.16
CHERP-204ENST00000546538 PATL2C9JE40 543 aaKnown RBP22.3■■□□□ 1.16
CHERP-204ENST00000546538 TDO2P48775 406 aa22.3■■□□□ 1.16
CHERP-204ENST00000546538 RRP1P56182 461 aaKnown RBP22.3■■□□□ 1.16
CHERP-204ENST00000546538 MDM2Q00987 491 aaPredicted RBP22.3■■□□□ 1.16
CHERP-204ENST00000546538 FAM47AQ5JRC9 791 aa22.3■■□□□ 1.16
CHERP-204ENST00000546538 ZMYM1Q5SVZ6 1142 aa22.3■■□□□ 1.16
CHERP-204ENST00000546538 TDHQ8IZJ6 230 aa22.3■■□□□ 1.16
CHERP-204ENST00000546538 SLF1Q9BQI6 1058 aa22.3■■□□□ 1.16
CHERP-204ENST00000546538 GNAT2P19087 354 aa22.29■■□□□ 1.16
CHERP-204ENST00000546538 MKL1Q969V6 931 aa22.29■■□□□ 1.16
CHERP-204ENST00000546538 MTMR4Q9NYA4 1195 aa22.29■■□□□ 1.16
CHERP-204ENST00000546538 CLIP2Q9UDT6 1046 aa22.29■■□□□ 1.16
CHERP-204ENST00000546538 TACC3Q9Y6A5 838 aa22.29■■□□□ 1.16
CHERP-204ENST00000546538 RTP1P59025 263 aa22.28■■□□□ 1.16
CHERP-204ENST00000546538 LRIT3Q3SXY7 679 aa22.28■■□□□ 1.16
CHERP-204ENST00000546538 UBE2OQ9C0C9 1292 aaKnown RBP22.28■■□□□ 1.16
CHERP-204ENST00000546538 PLIN4Q96Q06 1357 aa22.28■■□□□ 1.16
CHERP-204ENST00000546538 APPP05067 770 aa22.27■■□□□ 1.16
CHERP-204ENST00000546538 MX1P20591 662 aa22.27■■□□□ 1.16
CHERP-204ENST00000546538 LRRC41Q15345 812 aa22.27■■□□□ 1.16
CHERP-204ENST00000546538 CCDC129Q6ZRS4 1044 aa22.27■■□□□ 1.16
CHERP-204ENST00000546538 LRRC47Q8N1G4 583 aaKnown RBP22.27■■□□□ 1.16
CHERP-204ENST00000546538 LENG1Q96BZ8 264 aaPredicted RBP22.27■■□□□ 1.16
CHERP-204ENST00000546538 CRBNQ96SW2 442 aa22.27■■□□□ 1.16
CHERP-204ENST00000546538 TINF2Q9BSI4 451 aa22.27■■□□□ 1.16
CHERP-204ENST00000546538 SLC5A4Q9NY91 659 aa22.27■■□□□ 1.16
CHERP-204ENST00000546538 CDH23Q9H251 3354 aa22.26■■□□□ 1.15
CHERP-204ENST00000546538 ZNF865P0CJ78 1059 aaPredicted RBP22.26■■□□□ 1.15
CHERP-204ENST00000546538 SNX17Q15036 470 aa22.26■■□□□ 1.15
CHERP-204ENST00000546538 FSD1Q9BTV5 496 aa22.26■■□□□ 1.15
CHERP-204ENST00000546538 INCENPQ9NQS7 918 aa22.26■■□□□ 1.15
CHERP-204ENST00000546538 DNAJC25-GNG10A0A024R161 153 aa22.25■■□□□ 1.15
CHERP-204ENST00000546538 ERC2O15083 957 aa22.25■■□□□ 1.15
CHERP-204ENST00000546538 KCTD2Q14681 263 aa22.25■■□□□ 1.15
CHERP-204ENST00000546538 SNRNP48Q6IEG0 339 aaKnown RBP22.25■■□□□ 1.15
CHERP-204ENST00000546538 SLC39A5Q6ZMH5 540 aa22.25■■□□□ 1.15
CHERP-204ENST00000546538 Q7L0L9 218 aa22.25■■□□□ 1.15
CHERP-204ENST00000546538 ARRDC4Q8NCT1 418 aa22.25■■□□□ 1.15
CHERP-204ENST00000546538 NEDD1Q8NHV4 660 aa22.25■■□□□ 1.15
CHERP-204ENST00000546538 FGD4Q96M96 766 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms