RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 MCTP2Q6DN12 878 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 IFT81Q8WYA0 676 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 VPS18Q9P253 973 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 ACTN4O43707 911 aaKnown RBP11.58□□□□□ -0.56
SSH1-203ENST00000546433 STX10O60499 249 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 RHOXF2BP0C7M4 288 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 EVCP57679 992 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 TCP10Q12799 353 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 OTUD7AQ8TE49 926 aaPredicted RBP11.58□□□□□ -0.56
SSH1-203ENST00000546433 IFT74Q96LB3 600 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 FAM227BQ96M60 508 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 RHOXF2Q9BQY4 288 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 MAK16Q9BXY0 300 aaKnown RBP11.58□□□□□ -0.56
SSH1-203ENST00000546433 RBSNQ9H1K0 784 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 PODNQ7Z5L7 613 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 CPLX4Q7Z7G2 160 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 UBL4BQ8N7F7 174 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 CCDC63Q8NA47 563 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 PPP1R9BQ96SB3 815 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 PLIN2Q99541 437 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 GPCPD1Q9NPB8 672 aa11.58□□□□□ -0.56
SSH1-203ENST00000546433 SAP30BPQ9UHR5 308 aaKnown RBP11.58□□□□□ -0.56
SSH1-203ENST00000546433 SETDB1Q15047 1291 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 FAM212AQ96EL1 285 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 KCNG1Q9UIX4 513 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 ADAMTSL3P82987 1691 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 POLR2DO15514 142 aaKnown RBP11.57□□□□□ -0.56
SSH1-203ENST00000546433 ARHGAP6O43182 974 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 ZNF202O95125 648 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 KCTD2Q14681 263 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 OTUD6BQ8N6M0 293 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 RAB3IL1Q8TBN0 382 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 NOX5Q96PH1 765 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 AP5M1Q9H0R1 490 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 TRERF1Q96PN7 1200 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 FHDC1Q9C0D6 1143 aaPredicted RBP11.57□□□□□ -0.56
SSH1-203ENST00000546433 ATP2C2O75185 946 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 CHRNDQ07001 517 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 SLC9C1Q4G0N8 1177 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 ELMSAN1Q6PJG2 1045 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 CHURC1Q8WUH1 139 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 CCDC114Q96M63 670 aa11.57□□□□□ -0.56
SSH1-203ENST00000546433 MTIF3Q9H2K0 278 aaKnown RBP11.57□□□□□ -0.56
SSH1-203ENST00000546433 ARPP21Q9UBL0 812 aaPredicted RBP11.57□□□□□ -0.56
SSH1-203ENST00000546433 CYP27B1O15528 508 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 POSTNQ15063 836 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 KRT40Q6A162 431 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 CBX8Q9HC52 389 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 FAM169AQ9Y6X4 670 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 PNMA6EA0A0J9YXQ4 647 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 CDAN1Q8IWY9 1227 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 ZNF274Q96GC6 653 aaPredicted RBP11.56□□□□□ -0.56
SSH1-203ENST00000546433 VPS16Q9H269 839 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 NKIRAS1Q9NYS0 192 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 ZBTB21Q9ULJ3 1066 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 AXIN2Q9Y2T1 843 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 ARHGEF35A5YM69 484 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 GAS8O95995 478 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 SLC8A3P57103 927 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 STRN3Q13033 797 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 C8orf74Q6P047 294 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 RAET1EQ8TD07 263 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 SECISBP2LQ93073 1101 aaKnown RBP11.56□□□□□ -0.56
SSH1-203ENST00000546433 CCDC51Q96ER9 411 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 LRWD1Q9UFC0 647 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.56□□□□□ -0.56
SSH1-203ENST00000546433 NOP56O00567 594 aaKnown RBP11.56□□□□□ -0.56
SSH1-203ENST00000546433 SPOPO43791 374 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 CYP19A1P11511 503 aaPredicted RBP11.56□□□□□ -0.56
SSH1-203ENST00000546433 BIRC3Q13489 604 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 TTLL7Q6ZT98 887 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 SWAP70Q9UH65 585 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 TAF5LO75529 589 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 ERCC5P28715 1186 aaPredicted RBP11.56□□□□□ -0.56
SSH1-203ENST00000546433 PPM1FP49593 454 aaPredicted RBP11.56□□□□□ -0.56
SSH1-203ENST00000546433 NFIXQ14938 502 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 TBC1D10BQ4KMP7 808 aaPredicted RBP11.56□□□□□ -0.56
SSH1-203ENST00000546433 TBC1D9BQ66K14 1250 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 CCDC84Q86UT8 332 aaPredicted RBP11.56□□□□□ -0.56
SSH1-203ENST00000546433 IFT20Q8IY31 132 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 SYCE1Q8N0S2 351 aa11.56□□□□□ -0.56
SSH1-203ENST00000546433 CELF2O95319 508 aaKnown RBP11.55□□□□□ -0.56
SSH1-203ENST00000546433 GNA14O95837 355 aa11.55□□□□□ -0.56
SSH1-203ENST00000546433 KRT5P13647 590 aa11.55□□□□□ -0.56
SSH1-203ENST00000546433 AOC3Q16853 763 aa11.55□□□□□ -0.56
SSH1-203ENST00000546433 INF2Q27J81 1249 aa11.55□□□□□ -0.56
SSH1-203ENST00000546433 RRAGCQ9HB90 399 aa11.55□□□□□ -0.56
SSH1-203ENST00000546433 TNS2Q63HR2 1409 aa11.55□□□□□ -0.56
SSH1-203ENST00000546433 ZNF532Q9HCE3 1301 aa11.55□□□□□ -0.56
SSH1-203ENST00000546433 ALDH1A1P00352 501 aa11.55□□□□□ -0.56
SSH1-203ENST00000546433 TERF1P54274 439 aa11.55□□□□□ -0.56
SSH1-203ENST00000546433 MRPS9P82933 396 aaKnown RBP11.55□□□□□ -0.56
SSH1-203ENST00000546433 CDC37L1Q7L3B6 337 aa11.55□□□□□ -0.56
SSH1-203ENST00000546433 IL17REQ8NFR9 667 aa11.55□□□□□ -0.56
SSH1-203ENST00000546433 GTF3C2Q8WUA4 911 aaPredicted RBP11.55□□□□□ -0.56
SSH1-203ENST00000546433 UBLCP1Q8WVY7 318 aaPredicted RBP11.55□□□□□ -0.56
SSH1-203ENST00000546433 LBHD1Q9BQE6 289 aaPredicted RBP11.55□□□□□ -0.56
SSH1-203ENST00000546433 NCOA5Q9HCD5 579 aaKnown RBP11.55□□□□□ -0.56
SSH1-203ENST00000546433 ANAPC4Q9UJX5 808 aa11.55□□□□□ -0.56
SSH1-203ENST00000546433 UTP11Q9Y3A2 253 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms