RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 RASSF7Q02833 373 aa13.72□□□□□ -0.21
CCDC38-202ENST00000546386 CCDC173Q0VFZ6 552 aa13.72□□□□□ -0.21
CCDC38-202ENST00000546386 TIAM2Q8IVF5 1701 aa13.72□□□□□ -0.21
CCDC38-202ENST00000546386 DHX58Q96C10 678 aa13.72□□□□□ -0.21
CCDC38-202ENST00000546386 ZFP91Q96JP5 570 aaPredicted RBP13.72□□□□□ -0.21
CCDC38-202ENST00000546386 CSRNP1Q96S65 589 aa13.72□□□□□ -0.21
CCDC38-202ENST00000546386 PFKFB3Q16875 520 aaPredicted RBP13.72□□□□□ -0.21
CCDC38-202ENST00000546386 TMC4Q7Z404 712 aa13.72□□□□□ -0.21
CCDC38-202ENST00000546386 NLGN2Q8NFZ4 835 aa13.72□□□□□ -0.21
CCDC38-202ENST00000546386 NEDD1Q8NHV4 660 aa13.72□□□□□ -0.21
CCDC38-202ENST00000546386 RBM28Q9NW13 759 aaKnown RBP13.72□□□□□ -0.21
CCDC38-202ENST00000546386 KCNH3Q9ULD8 1083 aa13.72□□□□□ -0.21
CCDC38-202ENST00000546386 GJA3Q9Y6H8 435 aa13.72□□□□□ -0.21
CCDC38-202ENST00000546386 KIAA1551Q9HCM1 1747 aa13.71□□□□□ -0.21
CCDC38-202ENST00000546386 YEATS4O95619 227 aa13.71□□□□□ -0.21
CCDC38-202ENST00000546386 PDIA4P13667 645 aaKnown RBP13.71□□□□□ -0.21
CCDC38-202ENST00000546386 KIF5BP33176 963 aa13.71□□□□□ -0.21
CCDC38-202ENST00000546386 NAPAP54920 295 aa13.71□□□□□ -0.21
CCDC38-202ENST00000546386 IKQ13123 557 aaPredicted RBP13.71□□□□□ -0.21
CCDC38-202ENST00000546386 AOPEPQ8N6M6 819 aa13.71□□□□□ -0.21
CCDC38-202ENST00000546386 TRIM34Q9BYJ4 488 aa13.71□□□□□ -0.21
CCDC38-202ENST00000546386 SERTAD1Q9UHV2 236 aa13.71□□□□□ -0.21
CCDC38-202ENST00000546386 MYH6P13533 1939 aa13.71□□□□□ -0.21
CCDC38-202ENST00000546386 COL4A5P29400 1685 aa13.71□□□□□ -0.22
CCDC38-202ENST00000546386 ESPNB1AK53 854 aa13.71□□□□□ -0.22
CCDC38-202ENST00000546386 CALM1P0DP23 149 aa13.71□□□□□ -0.22
CCDC38-202ENST00000546386 CALM2P0DP24 149 aa13.71□□□□□ -0.22
CCDC38-202ENST00000546386 CALM3P0DP25 149 aa13.71□□□□□ -0.22
CCDC38-202ENST00000546386 PDHBP11177 359 aa13.71□□□□□ -0.22
CCDC38-202ENST00000546386 XBP1P17861 261 aa13.71□□□□□ -0.22
CCDC38-202ENST00000546386 UBE2SQ16763 222 aa13.71□□□□□ -0.22
CCDC38-202ENST00000546386 DRC7Q8IY82 874 aa13.71□□□□□ -0.22
CCDC38-202ENST00000546386 SMYD4Q8IYR2 804 aaPredicted RBP13.71□□□□□ -0.22
CCDC38-202ENST00000546386 FOXP1Q9H334 677 aaPredicted RBP13.71□□□□□ -0.22
CCDC38-202ENST00000546386 ECM29Q5VYK3 1845 aa13.71□□□□□ -0.22
CCDC38-202ENST00000546386 STK36Q9NRP7 1315 aa13.7□□□□□ -0.22
CCDC38-202ENST00000546386 MYH1P12882 1939 aa13.7□□□□□ -0.22
CCDC38-202ENST00000546386 EEF2P13639 858 aaKnown RBP13.7□□□□□ -0.22
CCDC38-202ENST00000546386 ECE1P42892 770 aa13.7□□□□□ -0.22
CCDC38-202ENST00000546386 GABPAQ06546 454 aa13.7□□□□□ -0.22
CCDC38-202ENST00000546386 IL17AQ16552 155 aa13.7□□□□□ -0.22
CCDC38-202ENST00000546386 KRI1Q8N9T8 703 aaKnown RBP13.7□□□□□ -0.22
CCDC38-202ENST00000546386 CNNM3Q8NE01 707 aa13.7□□□□□ -0.22
CCDC38-202ENST00000546386 TRIM5Q9C035 493 aa13.7□□□□□ -0.22
CCDC38-202ENST00000546386 FBXO2Q9UK22 296 aaPredicted RBP13.7□□□□□ -0.22
CCDC38-202ENST00000546386 DDX60LQ5H9U9 1706 aaKnown RBP13.7□□□□□ -0.22
CCDC38-202ENST00000546386 TRIM75PA6NK02 468 aa13.7□□□□□ -0.22
CCDC38-202ENST00000546386 USP17L10C9JJH3 530 aa13.7□□□□□ -0.22
CCDC38-202ENST00000546386 GH2P01242 217 aa13.7□□□□□ -0.22
CCDC38-202ENST00000546386 DHX8Q14562 1220 aaKnown RBP13.7□□□□□ -0.22
CCDC38-202ENST00000546386 GRM4Q14833 912 aa13.7□□□□□ -0.22
CCDC38-202ENST00000546386 LETM2Q2VYF4 491 aa13.7□□□□□ -0.22
CCDC38-202ENST00000546386 CERKLQ49MI3 558 aaPredicted RBP13.7□□□□□ -0.22
CCDC38-202ENST00000546386 SAMD7Q7Z3H4 446 aa13.7□□□□□ -0.22
CCDC38-202ENST00000546386 FAM200AQ8TCP9 573 aa13.7□□□□□ -0.22
CCDC38-202ENST00000546386 EEF2KMTQ96G04 330 aa13.7□□□□□ -0.22
CCDC38-202ENST00000546386 ZDHHC15Q96MV8 337 aa13.7□□□□□ -0.22
CCDC38-202ENST00000546386 BLZF1Q9H2G9 400 aa13.7□□□□□ -0.22
CCDC38-202ENST00000546386 LETM1O95202 739 aaPredicted RBP13.69□□□□□ -0.22
CCDC38-202ENST00000546386 HLA-DOAP06340 250 aa13.69□□□□□ -0.22
CCDC38-202ENST00000546386 CMA1P23946 247 aa13.69□□□□□ -0.22
CCDC38-202ENST00000546386 ARID5BQ14865 1188 aa13.69□□□□□ -0.22
CCDC38-202ENST00000546386 USH1GQ495M9 461 aa13.69□□□□□ -0.22
CCDC38-202ENST00000546386 HHIPL2Q6UWX4 724 aa13.69□□□□□ -0.22
CCDC38-202ENST00000546386 TMEM60Q9H2L4 133 aa13.69□□□□□ -0.22
CCDC38-202ENST00000546386 PALM3A6NDB9 673 aaPredicted RBP13.69□□□□□ -0.22
CCDC38-202ENST00000546386 SMCO2A6NFE2 343 aa13.69□□□□□ -0.22
CCDC38-202ENST00000546386 CXCL9Q07325 125 aa13.69□□□□□ -0.22
CCDC38-202ENST00000546386 CCDC93Q567U6 631 aa13.69□□□□□ -0.22
CCDC38-202ENST00000546386 RILPL1Q5EBL4 403 aa13.69□□□□□ -0.22
CCDC38-202ENST00000546386 TTC38Q5R3I4 469 aa13.69□□□□□ -0.22
CCDC38-202ENST00000546386 METTL16Q86W50 562 aaKnown RBP13.69□□□□□ -0.22
CCDC38-202ENST00000546386 SYMPKQ92797 1274 aaKnown RBP13.69□□□□□ -0.22
CCDC38-202ENST00000546386 PPP1R9BQ96SB3 815 aa13.69□□□□□ -0.22
CCDC38-202ENST00000546386 KIAA1468Q9P260 1216 aa13.69□□□□□ -0.22
CCDC38-202ENST00000546386 MAPK8IP1Q9UQF2 711 aa13.69□□□□□ -0.22
CCDC38-202ENST00000546386 CDK5RAP2Q96SN8 1893 aa13.68□□□□□ -0.22
CCDC38-202ENST00000546386 BECN2A8MW95 431 aa13.68□□□□□ -0.22
CCDC38-202ENST00000546386 PCP11498 1178 aaKnown RBP13.68□□□□□ -0.22
CCDC38-202ENST00000546386 SLC30A10Q6XR72 485 aa13.68□□□□□ -0.22
CCDC38-202ENST00000546386 CREBRFQ8IUR6 639 aa13.68□□□□□ -0.22
CCDC38-202ENST00000546386 TRMT44Q8IYL2 757 aaKnown RBP13.68□□□□□ -0.22
CCDC38-202ENST00000546386 BLIDQ8IZY5 108 aa13.68□□□□□ -0.22
CCDC38-202ENST00000546386 OGFOD1Q8N543 542 aa13.68□□□□□ -0.22
CCDC38-202ENST00000546386 GLIS2Q9BZE0 524 aaPredicted RBP13.68□□□□□ -0.22
CCDC38-202ENST00000546386 ZNF287Q9HBT7 754 aa13.68□□□□□ -0.22
CCDC38-202ENST00000546386 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.68□□□□□ -0.22
CCDC38-202ENST00000546386 PCDHA5Q9Y5H7 936 aa13.68□□□□□ -0.22
CCDC38-202ENST00000546386 LTBP1Q14766 1721 aa13.68□□□□□ -0.22
CCDC38-202ENST00000546386 PPP1R11O60927 126 aaPredicted RBP13.68□□□□□ -0.22
CCDC38-202ENST00000546386 TOP1P11387 765 aaKnown RBP13.68□□□□□ -0.22
CCDC38-202ENST00000546386 LMOD1P29536 600 aaPredicted RBP13.68□□□□□ -0.22
CCDC38-202ENST00000546386 PRKG1Q13976 671 aa13.68□□□□□ -0.22
CCDC38-202ENST00000546386 ADGRF4Q8IZF3 695 aa13.68□□□□□ -0.22
CCDC38-202ENST00000546386 PIM2Q9P1W9 311 aa13.68□□□□□ -0.22
CCDC38-202ENST00000546386 PCDHA6Q9UN73 950 aa13.68□□□□□ -0.22
CCDC38-202ENST00000546386 PCDHA8Q9Y5H6 950 aa13.68□□□□□ -0.22
CCDC38-202ENST00000546386 STXBP3O00186 592 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 TTLL1O95922 423 aa13.67□□□□□ -0.22
CCDC38-202ENST00000546386 DLGAP5Q15398 846 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms