RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 RFX7Q2KHR2 1363 aa7.67□□□□□ -1.18
PRKDC-211ENST00000546304 LAMB1P07942 1786 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 TMEM229AB2RXF0 380 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 ATP9BO43861 1147 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 IDH1O75874 414 aaKnown RBP7.66□□□□□ -1.18
PRKDC-211ENST00000546304 F11P03951 625 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 EPHX2P34913 555 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 EPS15P42566 896 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 MMP14P50281 582 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 TLR1Q15399 786 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 TMEM214Q6NUQ4 689 aaKnown RBP7.66□□□□□ -1.18
PRKDC-211ENST00000546304 SKAP1Q86WV1 359 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 TRPM4Q8TD43 1214 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 RHBDD1Q8TEB9 315 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 TEKT1Q969V4 418 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 ZNF837Q96EG3 531 aaPredicted RBP7.66□□□□□ -1.18
PRKDC-211ENST00000546304 TAF1DQ9H5J8 278 aaPredicted RBP7.66□□□□□ -1.18
PRKDC-211ENST00000546304 ANTXR1Q9H6X2 564 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 MYOZ2Q9NPC6 264 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 ADARB2Q9NS39 739 aaKnown RBP7.66□□□□□ -1.18
PRKDC-211ENST00000546304 RAI14Q9P0K7 980 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 LRP2BPQ9P2M1 347 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 CNOT7Q9UIV1 285 aaKnown RBP7.66□□□□□ -1.18
PRKDC-211ENST00000546304 SERPINA10Q9UK55 444 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 TRPM7Q96QT4 1865 aa7.66□□□□□ -1.18
PRKDC-211ENST00000546304 MROH7-TTC4A0A0A0MT08 1334 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 A0A1B0GTH6 734 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 H7C1D1 291 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 GAKO14976 1311 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 IGSF3O75054 1194 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 MAP4K4O95819 1239 aaPredicted RBP7.65□□□□□ -1.18
PRKDC-211ENST00000546304 EGFRP00533 1210 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 MYH1P12882 1939 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 VEGFAP15692 232 aaPredicted RBP7.65□□□□□ -1.18
PRKDC-211ENST00000546304 CRKP46108 304 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 SMTNP53814 917 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 HDLBPQ00341 1268 aaKnown RBP7.65□□□□□ -1.18
PRKDC-211ENST00000546304 MECOMQ03112 1051 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 MAP3K12Q12852 859 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 LAMA4Q16363 1823 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 DBN1Q16643 649 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 TBC1D10BQ4KMP7 808 aaPredicted RBP7.65□□□□□ -1.18
PRKDC-211ENST00000546304 C4orf17Q53FE4 359 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 RNFT1Q5M7Z0 435 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 TTC22Q5TAA0 569 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 USP17L2Q6R6M4 530 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 KBTBD3Q8NAB2 608 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 ZNF384Q8TF68 577 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 GLMNQ92990 594 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 NSUN4Q96CB9 384 aaKnown RBP7.65□□□□□ -1.18
PRKDC-211ENST00000546304 FSD1Q9BTV5 496 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.65□□□□□ -1.183e-7■■□□□ 13.5
PRKDC-211ENST00000546304 BAZ2AQ9UIF9 1905 aaKnown RBP7.65□□□□□ -1.18
PRKDC-211ENST00000546304 DAGLAQ9Y4D2 1042 aa7.65□□□□□ -1.18
PRKDC-211ENST00000546304 OTOFQ9HC10 1997 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 MYH8P13535 1937 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 GSPT1P15170 499 aaKnown RBP7.64□□□□□ -1.19
PRKDC-211ENST00000546304 PDE6AP16499 860 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 RGS3P49796 1198 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 RBM5P52756 815 aaKnown RBP eCLIP7.64□□□□□ -1.19
PRKDC-211ENST00000546304 GSTO1P78417 241 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 MTFR1Q15390 333 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 DLGAP5Q15398 846 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 CFAP100Q494V2 611 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 EAPPQ56P03 285 aaPredicted RBP7.64□□□□□ -1.19
PRKDC-211ENST00000546304 NAA16Q6N069 864 aaPredicted RBP7.64□□□□□ -1.19
PRKDC-211ENST00000546304 TMED8Q6PL24 325 aaPredicted RBP7.64□□□□□ -1.19
PRKDC-211ENST00000546304 RIPOR1Q6ZS17 1223 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 USP50Q70EL3 339 aaPredicted RBP7.64□□□□□ -1.19
PRKDC-211ENST00000546304 PNMA8AQ86V59 439 aaPredicted RBP7.64□□□□□ -1.19
PRKDC-211ENST00000546304 TRIM50Q86XT4 487 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 CNTROBQ8N137 903 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 DEPDC4Q8N2C3 294 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 MAGEB6Q8N7X4 407 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 ZDHHC15Q96MV8 337 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 CNTNAP3BQ96NU0 1288 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 GAS2L1Q99501 681 aaPredicted RBP7.64□□□□□ -1.19
PRKDC-211ENST00000546304 CNTNAP3Q9BZ76 1288 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 RRAGCQ9HB90 399 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 GGA3Q9NZ52 723 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 PCDHAC2Q9Y5I4 1007 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 SIPA1L1O43166 1804 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 PAPPA2Q9BXP8 1791 aa7.64□□□□□ -1.19
PRKDC-211ENST00000546304 ASTN2O75129 1339 aaPredicted RBP7.63□□□□□ -1.19
PRKDC-211ENST00000546304 FAM181BA6NEQ2 426 aa7.63□□□□□ -1.19
PRKDC-211ENST00000546304 WNT10BO00744 389 aa7.63□□□□□ -1.19
PRKDC-211ENST00000546304 MYO1BO43795 1136 aa7.63□□□□□ -1.19
PRKDC-211ENST00000546304 SLURP2P0DP57 97 aa7.63□□□□□ -1.19
PRKDC-211ENST00000546304 CYP7A1P22680 504 aa7.63□□□□□ -1.19
PRKDC-211ENST00000546304 ADD2P35612 726 aa7.63□□□□□ -1.19
PRKDC-211ENST00000546304 BTDP43251 543 aa7.63□□□□□ -1.19
PRKDC-211ENST00000546304 SLC9C2Q5TAH2 1124 aa7.63□□□□□ -1.19
PRKDC-211ENST00000546304 FOXR1Q6PIV2 292 aa7.63□□□□□ -1.19
PRKDC-211ENST00000546304 HHIPL2Q6UWX4 724 aa7.63□□□□□ -1.19
PRKDC-211ENST00000546304 ADGRA1Q86SQ6 560 aa7.63□□□□□ -1.19
PRKDC-211ENST00000546304 LDHDQ86WU2 507 aa7.63□□□□□ -1.19
PRKDC-211ENST00000546304 EVI5LQ96CN4 794 aa7.63□□□□□ -1.19
PRKDC-211ENST00000546304 ZBED3Q96IU2 234 aaPredicted RBP7.63□□□□□ -1.19
PRKDC-211ENST00000546304 CEP350Q5VT06 3117 aa7.63□□□□□ -1.19
PRKDC-211ENST00000546304 RPAP1Q9BWH6 1393 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms