RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 LONP1P36776 959 aaKnown RBP13.54□□□□□ -0.24
NPC1L1-204ENST00000546276 CEP128Q6ZU80 1094 aa13.54□□□□□ -0.24
NPC1L1-204ENST00000546276 LSM14BQ9BX40 385 aaKnown RBP13.54□□□□□ -0.24
NPC1L1-204ENST00000546276 ERVV-2B6SEH9 535 aa13.54□□□□□ -0.24
NPC1L1-204ENST00000546276 PUS3Q9BZE2 481 aaKnown RBP13.54□□□□□ -0.24
NPC1L1-204ENST00000546276 RAB17Q9H0T7 212 aa13.54□□□□□ -0.24
NPC1L1-204ENST00000546276 HDAC9Q9UKV0 1011 aa13.54□□□□□ -0.24
NPC1L1-204ENST00000546276 CLTCL1P53675 1640 aa13.54□□□□□ -0.24
NPC1L1-204ENST00000546276 ZBTB38Q8NAP3 1195 aaPredicted RBP13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 CTTNBP2NLQ9P2B4 639 aa13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 UNC13BO14795 1591 aa13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 SOWAHDA6NJG2 315 aa13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 USP17L12C9JPN9 530 aa13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 USP17L21D6R901 530 aa13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 ENC1O14682 589 aa13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 RNF40O75150 1001 aa13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 ATP2A2P16615 1042 aaKnown RBP13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 CCT5P48643 541 aa13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 CCDC144BQ3MJ40 725 aa13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 PPFIBP2Q8ND30 876 aa13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 ARPP21Q9UBL0 812 aaPredicted RBP13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 PANX2Q96RD6 677 aa13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 CDC42BPAQ5VT25 1732 aa13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 DDAH1O94760 285 aa13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 SLFN14P0C7P3 912 aa13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 PTPN12Q05209 780 aaKnown RBP13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 SREK1Q8WXA9 508 aaKnown RBP13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 KIFAP3Q92845 792 aa13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 TSNARE1Q96NA8 513 aa13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 SAMSN1Q9NSI8 373 aaKnown RBP13.53□□□□□ -0.24
NPC1L1-204ENST00000546276 KCNK3O14649 394 aa13.52□□□□□ -0.24
NPC1L1-204ENST00000546276 CERS3Q8IU89 383 aa13.52□□□□□ -0.24
NPC1L1-204ENST00000546276 CACNA2D3Q8IZS8 1091 aa13.52□□□□□ -0.24
NPC1L1-204ENST00000546276 WDR66Q8TBY9 1149 aa13.52□□□□□ -0.24
NPC1L1-204ENST00000546276 NGLY1Q96IV0 654 aa13.52□□□□□ -0.24
NPC1L1-204ENST00000546276 RNF26Q9BY78 433 aaPredicted RBP13.52□□□□□ -0.24
NPC1L1-204ENST00000546276 OSBPL5Q9H0X9 879 aaPredicted RBP13.52□□□□□ -0.24
NPC1L1-204ENST00000546276 BUB1O43683 1085 aa13.52□□□□□ -0.24
NPC1L1-204ENST00000546276 EEF1GP26641 437 aaKnown RBP13.52□□□□□ -0.24
NPC1L1-204ENST00000546276 LTKP29376 864 aa13.52□□□□□ -0.24
NPC1L1-204ENST00000546276 DENND2CQ68D51 928 aa13.52□□□□□ -0.24
NPC1L1-204ENST00000546276 GRAMD1CQ8IYS0 662 aa13.52□□□□□ -0.24
NPC1L1-204ENST00000546276 MYOCDQ8IZQ8 938 aa13.52□□□□□ -0.24
NPC1L1-204ENST00000546276 CEP83Q9Y592 693 aa13.52□□□□□ -0.24
NPC1L1-204ENST00000546276 STK24Q9Y6E0 443 aa13.52□□□□□ -0.24
NPC1L1-204ENST00000546276 MADDQ8WXG6 1647 aa13.52□□□□□ -0.25
NPC1L1-204ENST00000546276 SMCO2A6NFE2 343 aa13.52□□□□□ -0.25
NPC1L1-204ENST00000546276 HNRNPH2P55795 449 aaKnown RBP13.52□□□□□ -0.25
NPC1L1-204ENST00000546276 INF2Q27J81 1249 aa13.52□□□□□ -0.25
NPC1L1-204ENST00000546276 ZNF365Q70YC5 407 aa13.52□□□□□ -0.25
NPC1L1-204ENST00000546276 OSBP2Q969R2 916 aa13.52□□□□□ -0.25
NPC1L1-204ENST00000546276 PPP1R1BQ9UD71 204 aaPredicted RBP13.52□□□□□ -0.25
NPC1L1-204ENST00000546276 PRR36Q9H6K5 1346 aa13.52□□□□□ -0.25
NPC1L1-204ENST00000546276 ACRBPQ8NEB7 543 aa13.52□□□□□ -0.25
NPC1L1-204ENST00000546276 SDR42E1Q8WUS8 393 aa13.52□□□□□ -0.25
NPC1L1-204ENST00000546276 TUBGCP2Q9BSJ2 902 aa13.52□□□□□ -0.25
NPC1L1-204ENST00000546276 NT5C3AQ9H0P0 336 aa13.52□□□□□ -0.25
NPC1L1-204ENST00000546276 AMFRQ9UKV5 643 aa13.52□□□□□ -0.25
NPC1L1-204ENST00000546276 DNM3Q9UQ16 869 aa13.52□□□□□ -0.25
NPC1L1-204ENST00000546276 LAMC1P11047 1609 aa13.52□□□□□ -0.25
NPC1L1-204ENST00000546276 KAT6BQ8WYB5 2073 aa13.52□□□□□ -0.25
NPC1L1-204ENST00000546276 MMP1P03956 469 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 OR52Z1P0C646 297 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 SMYD4Q8IYR2 804 aaPredicted RBP13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 ASIC3Q9UHC3 531 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 PRAMEF22A3QJZ6 481 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 SH2B2O14492 632 aaPredicted RBP13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 TRAPPC10P48553 1259 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 KMT5BQ4FZB7 885 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 NCAPH2Q6IBW4 605 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 EFCAB13Q8IY85 973 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 ZC3H12CQ9C0D7 883 aaKnown RBP13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 BAIAP2L1Q9UHR4 511 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 PCK1P35558 622 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 EIF6P56537 245 aaKnown RBP13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 GALNT17Q6IS24 598 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 VSIG1Q86XK7 387 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 LMNTD2Q8IXW0 634 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 CCDC63Q8NA47 563 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 STMN2Q93045 179 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 BPIFA3Q9BQP9 254 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 ZFYVE16Q7Z3T8 1539 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 COBLO75128 1261 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 RAD51AP2Q09MP3 1159 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 RETREG2Q8NC44 543 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 GOLPH3LQ9H4A5 285 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 MAGEF1Q9HAY2 307 aa13.51□□□□□ -0.25
NPC1L1-204ENST00000546276 PNPLA6Q8IY17 1366 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 B4DLN1 442 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 KRIT1O00522 736 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 IFNAR1P17181 557 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 PHKA1P46020 1223 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 NAA30Q147X3 362 aaPredicted RBP13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 FYB2Q5VWT5 728 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 CNOT6LQ96LI5 555 aaKnown RBP13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 TFCP2L1Q9NZI6 479 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 PARP2Q9UGN5 583 aa13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 RGS16O15492 202 aaPredicted RBP13.5□□□□□ -0.25
NPC1L1-204ENST00000546276 GBP1P32455 592 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms