RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 PPP2R3BQ9Y5P8 575 aa22.43■■□□□ 1.18
SKP2-208ENST00000546211 ZC3H4Q9UPT8 1303 aaKnown RBP22.43■■□□□ 1.18
SKP2-208ENST00000546211 MBD3O95983 291 aa22.42■■□□□ 1.18
SKP2-208ENST00000546211 HIRAP54198 1017 aaPredicted RBP22.42■■□□□ 1.18
SKP2-208ENST00000546211 MYSM1Q5VVJ2 828 aa22.42■■□□□ 1.18
SKP2-208ENST00000546211 DCAF15Q66K64 600 aa22.42■■□□□ 1.18
SKP2-208ENST00000546211 SLFN13Q68D06 897 aa22.42■■□□□ 1.18
SKP2-208ENST00000546211 GMCL1P1Q8NEA9 526 aa22.42■■□□□ 1.18
SKP2-208ENST00000546211 PHF20Q9BVI0 1012 aa22.42■■□□□ 1.18
SKP2-208ENST00000546211 FOXP1Q9H334 677 aaPredicted RBP22.42■■□□□ 1.18
SKP2-208ENST00000546211 BRMS1Q9HCU9 246 aa22.42■■□□□ 1.18
SKP2-208ENST00000546211 GPCPD1Q9NPB8 672 aa22.42■■□□□ 1.18
SKP2-208ENST00000546211 SEC63Q9UGP8 760 aaKnown RBP22.42■■□□□ 1.18
SKP2-208ENST00000546211 ELP1O95163 1332 aa22.42■■□□□ 1.18
SKP2-208ENST00000546211 MYH15Q9Y2K3 1946 aa22.42■■□□□ 1.18
SKP2-208ENST00000546211 SLC35G1Q2M3R5 365 aa22.42■■□□□ 1.18
SKP2-208ENST00000546211 SH3GLB2Q9NR46 395 aa22.42■■□□□ 1.18
SKP2-208ENST00000546211 PITPNM2Q9BZ72 1349 aa22.41■■□□□ 1.18
SKP2-208ENST00000546211 ASNSP08243 561 aa22.41■■□□□ 1.18
SKP2-208ENST00000546211 SLC1A4P43007 532 aa22.41■■□□□ 1.18
SKP2-208ENST00000546211 NBPF12Q5TAG4 269 aaPredicted RBP22.41■■□□□ 1.18
SKP2-208ENST00000546211 NOSTRINQ8IVI9 506 aa22.41■■□□□ 1.18
SKP2-208ENST00000546211 UBA5Q9GZZ9 404 aa22.41■■□□□ 1.18
SKP2-208ENST00000546211 CPVLQ9H3G5 476 aa22.41■■□□□ 1.18
SKP2-208ENST00000546211 RIOX1Q9H6W3 641 aa22.41■■□□□ 1.18
SKP2-208ENST00000546211 ISY1Q9ULR0 285 aaKnown RBP22.41■■□□□ 1.18
SKP2-208ENST00000546211 TCHHQ07283 1943 aa22.41■■□□□ 1.18
SKP2-208ENST00000546211 PHF20L1A8MW92 1017 aa22.4■■□□□ 1.18
SKP2-208ENST00000546211 BTBD18B2RXH4 712 aa22.4■■□□□ 1.18
SKP2-208ENST00000546211 F5H6K3 240 aa22.4■■□□□ 1.18
SKP2-208ENST00000546211 KRT2P35908 639 aa22.4■■□□□ 1.18
SKP2-208ENST00000546211 NLRP5P59047 1200 aa22.4■■□□□ 1.18
SKP2-208ENST00000546211 UBE2HP62256 183 aa22.4■■□□□ 1.18
SKP2-208ENST00000546211 KLRC3Q07444 240 aa22.4■■□□□ 1.18
SKP2-208ENST00000546211 FAM177A1Q8N128 213 aaPredicted RBP22.4■■□□□ 1.18
SKP2-208ENST00000546211 LEO1Q8WVC0 666 aaPredicted RBP22.4■■□□□ 1.18
SKP2-208ENST00000546211 USP28Q96RU2 1077 aa22.4■■□□□ 1.18
SKP2-208ENST00000546211 VAT1LQ9HCJ6 419 aa22.4■■□□□ 1.18
SKP2-208ENST00000546211 GINM1Q9NU53 330 aa22.4■■□□□ 1.18
SKP2-208ENST00000546211 GADD45BO75293 160 aaPredicted RBP22.39■■□□□ 1.18
SKP2-208ENST00000546211 HEATR3Q7Z4Q2 680 aa22.39■■□□□ 1.18
SKP2-208ENST00000546211 HOMER1Q86YM7 354 aa22.39■■□□□ 1.18
SKP2-208ENST00000546211 CCDC148Q8NFR7 591 aa22.39■■□□□ 1.18
SKP2-208ENST00000546211 SHISA4Q96DD7 197 aa22.39■■□□□ 1.18
SKP2-208ENST00000546211 GMCL1Q96IK5 515 aa22.39■■□□□ 1.18
SKP2-208ENST00000546211 L3MBTL3Q96JM7 780 aaPredicted RBP22.39■■□□□ 1.18
SKP2-208ENST00000546211 ZNF341Q9BYN7 854 aa22.39■■□□□ 1.18
SKP2-208ENST00000546211 SH2D4AQ9H788 454 aa22.39■■□□□ 1.18
SKP2-208ENST00000546211 CALML3P27482 149 aa22.38■■□□□ 1.17
SKP2-208ENST00000546211 CEBPZQ03701 1054 aaKnown RBP22.38■■□□□ 1.17
SKP2-208ENST00000546211 KCTD1Q719H9 257 aa22.38■■□□□ 1.17
SKP2-208ENST00000546211 GPT2Q8TD30 523 aa22.38■■□□□ 1.17
SKP2-208ENST00000546211 GPKOWQ92917 476 aaPredicted RBP eCLIP22.38■■□□□ 1.17
SKP2-208ENST00000546211 GOPCQ9HD26 462 aa22.38■■□□□ 1.17
SKP2-208ENST00000546211 TMX2Q9Y320 296 aa22.38■■□□□ 1.17
SKP2-208ENST00000546211 A0A1W2PRG0 241 aa22.38■■□□□ 1.17
SKP2-208ENST00000546211 CTNND1O60716 968 aaKnown RBP22.38■■□□□ 1.17
SKP2-208ENST00000546211 NDUFB10O96000 172 aa22.38■■□□□ 1.17
SKP2-208ENST00000546211 WWC2Q6AWC2 1192 aa22.38■■□□□ 1.17
SKP2-208ENST00000546211 CCDC12Q8WUD4 166 aaPredicted RBP22.38■■□□□ 1.17
SKP2-208ENST00000546211 PIGSQ96S52 555 aa22.38■■□□□ 1.17
SKP2-208ENST00000546211 BARHL2Q9NY43 387 aa22.38■■□□□ 1.17
SKP2-208ENST00000546211 RTEL1Q9NZ71 1219 aa22.38■■□□□ 1.17
SKP2-208ENST00000546211 hCG_1984214I3L0E3 225 aa22.37■■□□□ 1.17
SKP2-208ENST00000546211 VEGFAP15692 232 aaPredicted RBP22.37■■□□□ 1.17
SKP2-208ENST00000546211 TTBK2Q6IQ55 1244 aa22.37■■□□□ 1.17
SKP2-208ENST00000546211 ZNF713Q8N859 430 aaPredicted RBP22.37■■□□□ 1.17
SKP2-208ENST00000546211 DCPSQ96C86 337 aaKnown RBP22.37■■□□□ 1.17
SKP2-208ENST00000546211 POLR3EQ9NVU0 708 aa22.37■■□□□ 1.17
SKP2-208ENST00000546211 RCOR1Q9UKL0 485 aa22.37■■□□□ 1.17
SKP2-208ENST00000546211 GOLGA6L4A6NEF3 574 aa22.36■■□□□ 1.17
SKP2-208ENST00000546211 GLTPD2A6NH11 291 aa22.36■■□□□ 1.17
SKP2-208ENST00000546211 STXBP3O00186 592 aa22.36■■□□□ 1.17
SKP2-208ENST00000546211 ECE1P42892 770 aa22.36■■□□□ 1.17
SKP2-208ENST00000546211 NR5A1Q13285 461 aa22.36■■□□□ 1.17
SKP2-208ENST00000546211 SUPT20HL1Q3ZLR7 823 aa22.36■■□□□ 1.17
SKP2-208ENST00000546211 ADGRF4Q8IZF3 695 aa22.36■■□□□ 1.17
SKP2-208ENST00000546211 ACER1Q8TDN7 264 aa22.36■■□□□ 1.17
SKP2-208ENST00000546211 OXER1Q8TDS5 423 aa22.36■■□□□ 1.17
SKP2-208ENST00000546211 FTOQ9C0B1 505 aaKnown RBP eCLIP22.36■■□□□ 1.17
SKP2-208ENST00000546211 YEATS4O95619 227 aa22.35■■□□□ 1.17
SKP2-208ENST00000546211 BMP3P12645 472 aa22.35■■□□□ 1.17
SKP2-208ENST00000546211 GALNT17Q6IS24 598 aa22.35■■□□□ 1.17
SKP2-208ENST00000546211 USP50Q70EL3 339 aaPredicted RBP22.35■■□□□ 1.17
SKP2-208ENST00000546211 JMJD4Q9H9V9 463 aa22.35■■□□□ 1.17
SKP2-208ENST00000546211 SLC16A2P36021 539 aa22.34■■□□□ 1.17
SKP2-208ENST00000546211 NASPP49321 788 aaPredicted RBP22.34■■□□□ 1.17
SKP2-208ENST00000546211 STK38Q15208 465 aa22.34■■□□□ 1.17
SKP2-208ENST00000546211 RILPL1Q5EBL4 403 aa22.34■■□□□ 1.17
SKP2-208ENST00000546211 PRAMEF18Q5VWM3 479 aa22.34■■□□□ 1.17
SKP2-208ENST00000546211 ANO1Q5XXA6 986 aa22.34■■□□□ 1.17
SKP2-208ENST00000546211 GZF1Q9H116 711 aaPredicted RBP22.34■■□□□ 1.17
SKP2-208ENST00000546211 PCDHA4Q9UN74 947 aa22.34■■□□□ 1.17
SKP2-208ENST00000546211 CLIC4Q9Y696 253 aa22.34■■□□□ 1.17
SKP2-208ENST00000546211 PNMA6FA0A0J9YX94 578 aa22.33■■□□□ 1.17
SKP2-208ENST00000546211 NAPAP54920 295 aa22.33■■□□□ 1.17
SKP2-208ENST00000546211 NPY5RQ15761 445 aa22.33■■□□□ 1.17
SKP2-208ENST00000546211 TPRNQ4KMQ1 711 aa22.33■■□□□ 1.17
SKP2-208ENST00000546211 SULF1Q8IWU6 871 aa22.33■■□□□ 1.17
SKP2-208ENST00000546211 BLIDQ8IZY5 108 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms