RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	IRX2	Q9BZI1	471 aa	Predicted RBP	11.35	□□□□□ -0.59
UBC-213	ENST00000546120	THAP9	Q9H5L6	903 aa		11.35	□□□□□ -0.59
UBC-213	ENST00000546120	PAG1	Q9NWQ8	432 aa		11.35	□□□□□ -0.59
UBC-213	ENST00000546120	ETAA1	Q9NY74	926 aa		11.35	□□□□□ -0.59
UBC-213	ENST00000546120	CORO1C	Q9ULV4	474 aa	Predicted RBP	11.35	□□□□□ -0.59
UBC-213	ENST00000546120	HYOU1	Q9Y4L1	999 aa		11.35	□□□□□ -0.59
UBC-213	ENST00000546120	MROH7-TTC4	A0A0A0MT08	1334 aa		11.35	□□□□□ -0.59
UBC-213	ENST00000546120	TOPAZ1	Q8N9V7	1692 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120		E7ENQ6	273 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	AHCYL1	O43865	530 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	BMP6	P22004	513 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	MARCKS	P29966	332 aa	Predicted RBP	11.34	□□□□□ -0.59
UBC-213	ENST00000546120	IL15	P40933	162 aa	Predicted RBP	11.34	□□□□□ -0.59
UBC-213	ENST00000546120	METAP2	P50579	478 aa	Known RBP eCLIP	11.34	□□□□□ -0.59	2e-7	■■□□□ 11.9
UBC-213	ENST00000546120	CCNG1	P51959	295 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	ZBED6	P86452	979 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	GUCY1B3	Q02153	619 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	FMR1	Q06787	632 aa	Known RBP eCLIP	11.34	□□□□□ -0.59	3e-21	■■□□□ 11.5
UBC-213	ENST00000546120	PDE4B	Q07343	736 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	CUL1	Q13616	776 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	MTF1	Q14872	753 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	CMPK2	Q5EBM0	449 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	SLC9C2	Q5TAH2	1124 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	CCDC181	Q5TID7	509 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	DTNBP1	Q96EV8	351 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	CDC5L	Q99459	802 aa	Known RBP	11.34	□□□□□ -0.59
UBC-213	ENST00000546120	NUCKS1	Q9H1E3	243 aa	Known RBP	11.34	□□□□□ -0.59
UBC-213	ENST00000546120	SAMSN1	Q9NSI8	373 aa	Known RBP	11.34	□□□□□ -0.59
UBC-213	ENST00000546120	CTNNAL1	Q9UBT7	734 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	HPS5	Q9UPZ3	1129 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	TAF6L	Q9Y6J9	622 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	PEAK1	Q9H792	1746 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	FMN2	Q9NZ56	1722 aa		11.34	□□□□□ -0.59
UBC-213	ENST00000546120	TTC36	A6NLP5	189 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	MYO1F	O00160	1098 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	ZNF213	O14771	459 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	IFIT3	O14879	490 aa	Known RBP	11.33	□□□□□ -0.6
UBC-213	ENST00000546120	POLR2D	O15514	142 aa	Known RBP	11.33	□□□□□ -0.6
UBC-213	ENST00000546120	ACTN4	O43707	911 aa	Known RBP	11.33	□□□□□ -0.6
UBC-213	ENST00000546120	BUB1B	O60566	1050 aa	Predicted RBP	11.33	□□□□□ -0.6
UBC-213	ENST00000546120	FLOT1	O75955	427 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	CIAO1	O76071	339 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	PRR29	P0C7W0	189 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	IDE	P14735	1019 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	PECAM1	P16284	738 aa	Predicted RBP	11.33	□□□□□ -0.6
UBC-213	ENST00000546120	HNRNPH3	P31942	346 aa	Known RBP	11.33	□□□□□ -0.6
UBC-213	ENST00000546120	COPB1	P53618	953 aa	Known RBP	11.33	□□□□□ -0.6
UBC-213	ENST00000546120	EIF3B	P55884	814 aa	Known RBP	11.33	□□□□□ -0.6
UBC-213	ENST00000546120	SSRP1	Q08945	709 aa	Known RBP	11.33	□□□□□ -0.6
UBC-213	ENST00000546120	ITIH4	Q14624	930 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	CLUL1	Q15846	466 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	TCP11X2	Q5H9J9	407 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	NCAPH2	Q6IBW4	605 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	SPATA4	Q8NEY3	305 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	CUL5	Q93034	780 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	SUCLG2	Q96I99	432 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	SPAG5	Q96R06	1193 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	CNNM2	Q9H8M5	875 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	NCOA5	Q9HCD5	579 aa	Known RBP	11.33	□□□□□ -0.6
UBC-213	ENST00000546120	PLCB1	Q9NQ66	1216 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	GDF3	Q9NR23	364 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	NOP53	Q9NZM5	478 aa	Known RBP	11.33	□□□□□ -0.6
UBC-213	ENST00000546120	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.33	□□□□□ -0.6
UBC-213	ENST00000546120	DBNL	Q9UJU6	430 aa	Known RBP	11.33	□□□□□ -0.6
UBC-213	ENST00000546120	FBXO2	Q9UK22	296 aa	Predicted RBP	11.33	□□□□□ -0.6
UBC-213	ENST00000546120	GUCA1B	Q9UMX6	200 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	MST1R	Q04912	1400 aa		11.33	□□□□□ -0.6
UBC-213	ENST00000546120	ARHGAP23	Q9P227	1491 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	SLIT3	O75094	1523 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120		A0A087WWV3	80 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.32	□□□□□ -0.6
UBC-213	ENST00000546120	BTBD11	A6QL63	1104 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	LGALS16	A8MUM7	142 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	NUTM2E	B1AL46	878 aa	Predicted RBP	11.32	□□□□□ -0.6
UBC-213	ENST00000546120	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.32	□□□□□ -0.6
UBC-213	ENST00000546120	TRAPPC3	O43617	180 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	SNUPN	O95149	360 aa	Known RBP	11.32	□□□□□ -0.6
UBC-213	ENST00000546120	LCA5L	O95447	670 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	FES	P07332	822 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	MYZAP	P0CAP1	466 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	SETSIP	P0DME0	302 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	IFNAR1	P17181	557 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	EIF2S2	P20042	333 aa	Known RBP	11.32	□□□□□ -0.6
UBC-213	ENST00000546120	CCND1	P24385	295 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	FXR1	P51114	621 aa	Known RBP eCLIP	11.32	□□□□□ -0.6	1e-6	■■■□□ 17.1
UBC-213	ENST00000546120	ERVK-24	P63145	666 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	PAK1	Q13153	545 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	GCKR	Q14397	625 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	PPP2R5E	Q16537	467 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	IFI16	Q16666	785 aa	Known RBP	11.32	□□□□□ -0.6
UBC-213	ENST00000546120	MSL1	Q68DK7	614 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.32	□□□□□ -0.6
UBC-213	ENST00000546120	CEP57	Q86XR8	500 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	MFN1	Q8IWA4	741 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	CCDC26	Q8TAB7	109 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	ZNF483	Q8TF39	744 aa	Predicted RBP	11.32	□□□□□ -0.6
UBC-213	ENST00000546120	ZFAND2B	Q8WV99	257 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	SLF1	Q9BQI6	1058 aa		11.32	□□□□□ -0.6
UBC-213	ENST00000546120	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
UBC-213	ENST00000546120	MAGEF1	Q9HAY2	307 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms