RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 BADQ92934 168 aa20.14■□□□□ 0.81
CPSF7-225ENST00000545934 TRIM43Q96BQ3 446 aaPredicted RBP20.14■□□□□ 0.81
CPSF7-225ENST00000545934 KIF1BPQ96EK5 621 aa20.14■□□□□ 0.81
CPSF7-225ENST00000545934 CCDC17Q96LX7 622 aa20.14■□□□□ 0.81
CPSF7-225ENST00000545934 DNAJC2Q99543 621 aaKnown RBP20.14■□□□□ 0.81
CPSF7-225ENST00000545934 PHF24Q9UPV7 400 aa20.14■□□□□ 0.81
CPSF7-225ENST00000545934 SPTBN5Q9NRC6 3674 aaKnown RBP20.13■□□□□ 0.81
CPSF7-225ENST00000545934 ZBED9Q6R2W3 1325 aa20.13■□□□□ 0.81
CPSF7-225ENST00000545934 FCER1AP12319 257 aa20.13■□□□□ 0.81
CPSF7-225ENST00000545934 PLS1Q14651 629 aa20.13■□□□□ 0.81
CPSF7-225ENST00000545934 SLFNL1Q499Z3 407 aa20.13■□□□□ 0.81
CPSF7-225ENST00000545934 C12orf60Q5U649 245 aa20.13■□□□□ 0.81
CPSF7-225ENST00000545934 SH3RF1Q7Z6J0 888 aa20.13■□□□□ 0.81
CPSF7-225ENST00000545934 PRDM5Q9NQX1 630 aaPredicted RBP20.13■□□□□ 0.81
CPSF7-225ENST00000545934 MBD4O95243 580 aa20.12■□□□□ 0.81
CPSF7-225ENST00000545934 CDK8P49336 464 aa20.12■□□□□ 0.81
CPSF7-225ENST00000545934 C16orf86Q6ZW13 317 aa20.12■□□□□ 0.81
CPSF7-225ENST00000545934 RIOX2Q8IUF8 465 aa20.12■□□□□ 0.81
CPSF7-225ENST00000545934 SIRT2Q8IXJ6 389 aa20.12■□□□□ 0.81
CPSF7-225ENST00000545934 RPAP2Q8IXW5 612 aaPredicted RBP20.12■□□□□ 0.81
CPSF7-225ENST00000545934 CDX2Q99626 313 aaPredicted RBP20.12■□□□□ 0.81
CPSF7-225ENST00000545934 SEMA6BQ9H3T3 888 aa20.12■□□□□ 0.81
CPSF7-225ENST00000545934 PAG1Q9NWQ8 432 aa20.12■□□□□ 0.81
CPSF7-225ENST00000545934 DIS3Q9Y2L1 958 aaKnown RBP20.12■□□□□ 0.81
CPSF7-225ENST00000545934 VCANP13611 3396 aa20.12■□□□□ 0.81
CPSF7-225ENST00000545934 CYP2D7A0A087X1C5 515 aa20.11■□□□□ 0.81
CPSF7-225ENST00000545934 IFIT2P09913 472 aaKnown RBP20.11■□□□□ 0.81
CPSF7-225ENST00000545934 SMAD3P84022 425 aaKnown RBP20.11■□□□□ 0.81
CPSF7-225ENST00000545934 HNRNPUQ00839 825 aaKnown RBP eCLIP20.11■□□□□ 0.81
CPSF7-225ENST00000545934 ZNF792Q3KQV3 632 aa20.11■□□□□ 0.81
CPSF7-225ENST00000545934 REPS2Q8NFH8 660 aa20.11■□□□□ 0.81
CPSF7-225ENST00000545934 FERMT2Q96AC1 680 aa20.11■□□□□ 0.81
CPSF7-225ENST00000545934 TINF2Q9BSI4 451 aa20.11■□□□□ 0.81
CPSF7-225ENST00000545934 XPNPEP3Q9NQH7 507 aa20.11■□□□□ 0.81
CPSF7-225ENST00000545934 FBXO28Q9NVF7 368 aa20.11■□□□□ 0.81
CPSF7-225ENST00000545934 ZNF214Q9UL59 606 aaPredicted RBP20.11■□□□□ 0.81
CPSF7-225ENST00000545934 EEF2P13639 858 aaKnown RBP20.1■□□□□ 0.81
CPSF7-225ENST00000545934 ATP5JP18859 108 aa20.1■□□□□ 0.81
CPSF7-225ENST00000545934 ITGB8P26012 769 aa20.1■□□□□ 0.81
CPSF7-225ENST00000545934 TLE2Q04725 743 aa20.1■□□□□ 0.81
CPSF7-225ENST00000545934 MMP19Q99542 508 aa20.1■□□□□ 0.81
CPSF7-225ENST00000545934 TTYH1Q9H313 450 aaPredicted RBP20.1■□□□□ 0.81
CPSF7-225ENST00000545934 PRUNE2Q8WUY3 3088 aa20.1■□□□□ 0.81
CPSF7-225ENST00000545934 USP17L12C9JPN9 530 aa20.09■□□□□ 0.81
CPSF7-225ENST00000545934 USP17L21D6R901 530 aa20.09■□□□□ 0.81
CPSF7-225ENST00000545934 VWA5AO00534 786 aa20.09■□□□□ 0.81
CPSF7-225ENST00000545934 RAB11FIP3O75154 756 aa20.09■□□□□ 0.81
CPSF7-225ENST00000545934 CHGBP05060 677 aa20.09■□□□□ 0.81
CPSF7-225ENST00000545934 PGK2P07205 417 aa20.09■□□□□ 0.81
CPSF7-225ENST00000545934 ZNF865P0CJ78 1059 aaPredicted RBP20.09■□□□□ 0.81
CPSF7-225ENST00000545934 RARBP10826 455 aa20.09■□□□□ 0.81
CPSF7-225ENST00000545934 UBE3CQ15386 1083 aa20.09■□□□□ 0.81
CPSF7-225ENST00000545934 HAUS7Q99871 368 aa20.09■□□□□ 0.81
CPSF7-225ENST00000545934 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.09■□□□□ 0.81
CPSF7-225ENST00000545934 KANSL2Q9H9L4 492 aa20.09■□□□□ 0.81
CPSF7-225ENST00000545934 PPP1R9AQ9ULJ8 1098 aa20.09■□□□□ 0.81
CPSF7-225ENST00000545934 APBB1O00213 710 aa20.08■□□□□ 0.81
CPSF7-225ENST00000545934 KIAA0355O15063 1070 aa20.08■□□□□ 0.81
CPSF7-225ENST00000545934 MYCNP04198 464 aaPredicted RBP20.08■□□□□ 0.81
CPSF7-225ENST00000545934 TAL1P17542 331 aaPredicted RBP20.08■□□□□ 0.81
CPSF7-225ENST00000545934 BOLA2Q9H3K6 86 aa20.08■□□□□ 0.81
CPSF7-225ENST00000545934 ZBTB40Q9NUA8 1239 aa20.08■□□□□ 0.81
CPSF7-225ENST00000545934 TACC3Q9Y6A5 838 aa20.08■□□□□ 0.81
CPSF7-225ENST00000545934 ADAMTS4O75173 837 aa20.07■□□□□ 0.8
CPSF7-225ENST00000545934 CLTBP09497 229 aa20.07■□□□□ 0.8
CPSF7-225ENST00000545934 STAT3P40763 770 aa20.07■□□□□ 0.8
CPSF7-225ENST00000545934 EPHB4P54760 987 aa20.07■□□□□ 0.8
CPSF7-225ENST00000545934 KCTD2Q14681 263 aa20.07■□□□□ 0.8
CPSF7-225ENST00000545934 CTR9Q6PD62 1173 aa20.07■□□□□ 0.8
CPSF7-225ENST00000545934 RNF180Q86T96 592 aa20.07■□□□□ 0.8
CPSF7-225ENST00000545934 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.07■□□□□ 0.84e-7■■■□□ 16.7
CPSF7-225ENST00000545934 A0A1W2PQ45 241 aaPredicted RBP20.06■□□□□ 0.8
CPSF7-225ENST00000545934 A0A1W2PQY0 241 aa20.06■□□□□ 0.8
CPSF7-225ENST00000545934 HMMRO75330 724 aa20.06■□□□□ 0.8
CPSF7-225ENST00000545934 PGK1P00558 417 aa20.06■□□□□ 0.8
CPSF7-225ENST00000545934 AKR1A1P14550 325 aa20.06■□□□□ 0.8
CPSF7-225ENST00000545934 COPB2P35606 906 aa20.06■□□□□ 0.8
CPSF7-225ENST00000545934 SAMD1Q6SPF0 538 aaPredicted RBP20.06■□□□□ 0.8
CPSF7-225ENST00000545934 GBF1Q92538 1859 aa20.06■□□□□ 0.8
CPSF7-225ENST00000545934 GOPCQ9HD26 462 aa20.06■□□□□ 0.8
CPSF7-225ENST00000545934 TMEM265A0A087WTH1 108 aa20.05■□□□□ 0.8
CPSF7-225ENST00000545934 FAM83BQ5T0W9 1011 aa20.05■□□□□ 0.8
CPSF7-225ENST00000545934 AMOTL1Q8IY63 956 aa20.05■□□□□ 0.8
CPSF7-225ENST00000545934 MSL3Q8N5Y2 521 aaKnown RBP20.05■□□□□ 0.8
CPSF7-225ENST00000545934 MAFAQ8NHW3 353 aaPredicted RBP20.05■□□□□ 0.8
CPSF7-225ENST00000545934 MYLIPQ8WY64 445 aa20.05■□□□□ 0.8
CPSF7-225ENST00000545934 LRRC37A2A6NM11 1700 aa20.05■□□□□ 0.8
CPSF7-225ENST00000545934 DNAJC25-GNG10A0A024R161 153 aa20.04■□□□□ 0.8
CPSF7-225ENST00000545934 MS4A1P11836 297 aa20.04■□□□□ 0.8
CPSF7-225ENST00000545934 CCSAPQ6IQ19 270 aaPredicted RBP20.04■□□□□ 0.8
CPSF7-225ENST00000545934 ANKRD33Q7Z3H0 272 aa20.04■□□□□ 0.8
CPSF7-225ENST00000545934 KLHDC9Q8NEP7 349 aa20.04■□□□□ 0.8
CPSF7-225ENST00000545934 LENG1Q96BZ8 264 aaPredicted RBP20.04■□□□□ 0.8
CPSF7-225ENST00000545934 TOX2Q96NM4 488 aa20.04■□□□□ 0.8
CPSF7-225ENST00000545934 TSEN34Q9BSV6 310 aaKnown RBP20.04■□□□□ 0.8
CPSF7-225ENST00000545934 PUS7LQ9H0K6 701 aaKnown RBP20.04■□□□□ 0.8
CPSF7-225ENST00000545934 DDX19BQ9UMR2 479 aa20.04■□□□□ 0.8
CPSF7-225ENST00000545934 SLC4A4Q9Y6R1 1079 aa20.04■□□□□ 0.8
CPSF7-225ENST00000545934 SYNGAP1Q96PV0 1343 aa20.03■□□□□ 0.8
CPSF7-225ENST00000545934 SYNRGQ9UMZ2 1314 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms