RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-225ENST00000545930 Q6ZUG5 572 aa11.38□□□□□ -0.59
DDB1-225ENST00000545930 SLC44A5Q8NCS7 719 aa11.38□□□□□ -0.59
DDB1-225ENST00000545930 SMC1BQ8NDV3 1235 aa11.38□□□□□ -0.59
DDB1-225ENST00000545930 ZSCAN31Q96LW9 406 aaPredicted RBP11.38□□□□□ -0.59
DDB1-225ENST00000545930 UPF3BQ9BZI7 483 aaKnown RBP11.38□□□□□ -0.59
DDB1-225ENST00000545930 DNAJC18Q9H819 358 aa11.38□□□□□ -0.59
DDB1-225ENST00000545930 INCENPQ9NQS7 918 aa11.38□□□□□ -0.59
DDB1-225ENST00000545930 ANGEL1Q9UNK9 670 aaKnown RBP11.38□□□□□ -0.59
DDB1-225ENST00000545930 PCDHB3Q9Y5E6 796 aa11.38□□□□□ -0.59
DDB1-225ENST00000545930 TAF6LQ9Y6J9 622 aa11.38□□□□□ -0.59
DDB1-225ENST00000545930 CCDC69A6NI79 296 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 USP2O75604 605 aaPredicted RBP11.37□□□□□ -0.59
DDB1-225ENST00000545930 TOMM70O94826 608 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 TTLL1O95922 423 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 COPS2P61201 443 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 TTLL12Q14166 644 aaPredicted RBP11.37□□□□□ -0.59
DDB1-225ENST00000545930 MAP3K11Q16584 847 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 IFIT1BQ5T764 474 aaKnown RBP11.37□□□□□ -0.59
DDB1-225ENST00000545930 NFXL1Q6ZNB6 911 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 CYB5R4Q7L1T6 521 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 ANKRD13AQ8IZ07 590 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 C2orf69Q8N8R5 385 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 IGDCC4Q8TDY8 1250 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 ANKS1AQ92625 1134 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 SNX21Q969T3 373 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 KLRG1Q96E93 195 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 AGXT2Q9BYV1 514 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 TMEM134Q9H6X4 195 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 AS3MTQ9HBK9 375 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 PICK1Q9NRD5 415 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 SYNPO2Q9UMS6 1093 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 SCAF8Q9UPN6 1271 aaKnown RBP11.37□□□□□ -0.59
DDB1-225ENST00000545930 CSADQ9Y600 493 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 TACC3Q9Y6A5 838 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 PLIN4Q96Q06 1357 aa11.37□□□□□ -0.59
DDB1-225ENST00000545930 PHF20L1A8MW92 1017 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 SMIM22K7EJ46 135 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 CALM1P0DP23 149 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 CALM2P0DP24 149 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 CALM3P0DP25 149 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 AKR1B1P15121 316 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 PPP2R5BQ15173 497 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 NOL9Q5SY16 702 aaKnown RBP11.36□□□□□ -0.59
DDB1-225ENST00000545930 PRAMEF18Q5VWM3 479 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 CHST3Q7LGC8 479 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 HSCBQ8IWL3 235 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 ZNF274Q96GC6 653 aaPredicted RBP11.36□□□□□ -0.59
DDB1-225ENST00000545930 WRNIP1Q96S55 665 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 SH2D4AQ9H788 454 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 KAT14Q9H8E8 782 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 ARHGEF10LQ9HCE6 1279 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 SH2B1Q9NRF2 756 aaPredicted RBP11.36□□□□□ -0.59
DDB1-225ENST00000545930 MTMR4Q9NYA4 1195 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 NYAP2Q9P242 653 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 DAXXQ9UER7 740 aaPredicted RBP11.36□□□□□ -0.59
DDB1-225ENST00000545930 LIMCH1Q9UPQ0 1083 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
DDB1-225ENST00000545930 ADGRG1Q9Y653 693 aa11.36□□□□□ -0.59
DDB1-225ENST00000545930 TNKSO95271 1327 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 SIPA1L1O43166 1804 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 FAM196BA6NMK8 535 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 USP17L5A8MUK1 530 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 SH2B2O14492 632 aaPredicted RBP11.35□□□□□ -0.59
DDB1-225ENST00000545930 GH2P01242 217 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 TOP1P11387 765 aaKnown RBP11.35□□□□□ -0.59
DDB1-225ENST00000545930 RCAN1P53805 252 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 AK2P54819 239 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 ANTXR2P58335 489 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 FSTL1Q12841 308 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 RAB3GAP1Q15042 981 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 KMT5BQ4FZB7 885 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 CATIPQ7Z7H3 387 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 SGMS1Q86VZ5 419 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 SCYL3Q8IZE3 742 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 BRF1Q92994 677 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 MKL1Q969V6 931 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 ZKSCAN3Q9BRR0 538 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 ZBTB21Q9ULJ3 1066 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 STX8Q9UNK0 236 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 SLC12A7Q9Y666 1083 aa11.35□□□□□ -0.59
DDB1-225ENST00000545930 IGKV6D-41A0A0C4DH26 115 aa11.34□□□□□ -0.59
DDB1-225ENST00000545930 CCDC196A0A1B0GTZ2 297 aa11.34□□□□□ -0.59
DDB1-225ENST00000545930 DHX16O60231 1041 aaKnown RBP11.34□□□□□ -0.59
DDB1-225ENST00000545930 GDF11O95390 407 aa11.34□□□□□ -0.59
DDB1-225ENST00000545930 CPA1P15085 419 aa11.34□□□□□ -0.59
DDB1-225ENST00000545930 NOVP48745 357 aa11.34□□□□□ -0.59
DDB1-225ENST00000545930 EVCP57679 992 aa11.34□□□□□ -0.59
DDB1-225ENST00000545930 ICA1Q05084 483 aa11.34□□□□□ -0.59
DDB1-225ENST00000545930 SEPT2Q15019 361 aa11.34□□□□□ -0.59
DDB1-225ENST00000545930 SEC23AQ15436 765 aa11.34□□□□□ -0.59
DDB1-225ENST00000545930 ENAHQ8N8S7 591 aaPredicted RBP11.34□□□□□ -0.59
DDB1-225ENST00000545930 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.34□□□□□ -0.59
DDB1-225ENST00000545930 CEP95Q96GE4 821 aa11.34□□□□□ -0.59
DDB1-225ENST00000545930 MAP3K14Q99558 947 aa11.34□□□□□ -0.59
DDB1-225ENST00000545930 LY9Q9HBG7 655 aa11.34□□□□□ -0.59
DDB1-225ENST00000545930 GBA2Q9HCG7 927 aaPredicted RBP11.34□□□□□ -0.59
DDB1-225ENST00000545930 IL17RBQ9NRM6 502 aa11.34□□□□□ -0.59
DDB1-225ENST00000545930 CLIP2Q9UDT6 1046 aa11.34□□□□□ -0.59
DDB1-225ENST00000545930 C19orf81C9J6K1 198 aa11.33□□□□□ -0.6
DDB1-225ENST00000545930 ZBTB43O43298 467 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms