RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 SLC35F6Q8N357 371 aa17.88■□□□□ 0.45
LDLR-204ENST00000545707 NELFBQ8WX92 580 aa17.88■□□□□ 0.45
LDLR-204ENST00000545707 FAM205AQ6ZU69 1335 aa17.87■□□□□ 0.45
LDLR-204ENST00000545707 TSPY2A6NKD2 308 aa17.87■□□□□ 0.45
LDLR-204ENST00000545707 GYS2P54840 703 aa17.87■□□□□ 0.45
LDLR-204ENST00000545707 CHMP4BP1P59074 171 aa17.87■□□□□ 0.45
LDLR-204ENST00000545707 KIF4BQ2VIQ3 1234 aa17.87■□□□□ 0.45
LDLR-204ENST00000545707 SLC51AQ86UW1 340 aa17.87■□□□□ 0.45
LDLR-204ENST00000545707 RABGGTAQ92696 567 aa17.87■□□□□ 0.45
LDLR-204ENST00000545707 NUP88Q99567 741 aaPredicted RBP17.87■□□□□ 0.45
LDLR-204ENST00000545707 ARFGAP3Q9NP61 516 aa17.87■□□□□ 0.45
LDLR-204ENST00000545707 TRIM49BA6NDI0 452 aa17.87■□□□□ 0.45
LDLR-204ENST00000545707 USP17L8P0C7I0 530 aa17.87■□□□□ 0.45
LDLR-204ENST00000545707 COPB1P53618 953 aaKnown RBP17.87■□□□□ 0.45
LDLR-204ENST00000545707 STAG2Q8N3U4 1231 aa17.87■□□□□ 0.45
LDLR-204ENST00000545707 EEF2KMTQ96G04 330 aa17.87■□□□□ 0.45
LDLR-204ENST00000545707 SLF1Q9BQI6 1058 aa17.87■□□□□ 0.45
LDLR-204ENST00000545707 CACNA1SQ13698 1873 aa17.87■□□□□ 0.45
LDLR-204ENST00000545707 MYH14Q7Z406 1995 aaKnown RBP17.86■□□□□ 0.45
LDLR-204ENST00000545707 OAS2P29728 719 aaKnown RBP17.86■□□□□ 0.45
LDLR-204ENST00000545707 TXLNAP40222 546 aa17.86■□□□□ 0.45
LDLR-204ENST00000545707 PRCPP42785 496 aa17.86■□□□□ 0.45
LDLR-204ENST00000545707 ST5P78524 1137 aa17.86■□□□□ 0.45
LDLR-204ENST00000545707 PAK1Q13153 545 aa17.86■□□□□ 0.45
LDLR-204ENST00000545707 PFKFB3Q16875 520 aaPredicted RBP17.86■□□□□ 0.45
LDLR-204ENST00000545707 CT47A1Q5JQC4 288 aaPredicted RBP17.86■□□□□ 0.45
LDLR-204ENST00000545707 RCSD1Q6JBY9 416 aa17.86■□□□□ 0.45
LDLR-204ENST00000545707 CNGA4Q8IV77 575 aa17.86■□□□□ 0.45
LDLR-204ENST00000545707 NAA15Q9BXJ9 866 aaKnown RBP17.86■□□□□ 0.45
LDLR-204ENST00000545707 KCNJ18B7U540 433 aa17.86■□□□□ 0.45
LDLR-204ENST00000545707 RPN1P04843 607 aaKnown RBP17.86■□□□□ 0.45
LDLR-204ENST00000545707 KCNJ12Q14500 433 aa17.86■□□□□ 0.45
LDLR-204ENST00000545707 SMC1AQ14683 1233 aaKnown RBP17.86■□□□□ 0.45
LDLR-204ENST00000545707 SRGAP1Q7Z6B7 1085 aa17.86■□□□□ 0.45
LDLR-204ENST00000545707 TXNRD3Q86VQ6 643 aa17.86■□□□□ 0.45
LDLR-204ENST00000545707 CHP1Q99653 195 aa17.86■□□□□ 0.45
LDLR-204ENST00000545707 FUT8Q9BYC5 575 aa17.86■□□□□ 0.45
LDLR-204ENST00000545707 ABHD10Q9NUJ1 306 aa17.86■□□□□ 0.45
LDLR-204ENST00000545707 LIMA1Q9UHB6 759 aaKnown RBP17.86■□□□□ 0.45
LDLR-204ENST00000545707 GTPBP6O43824 516 aaPredicted RBP17.85■□□□□ 0.45
LDLR-204ENST00000545707 TCP11X2Q5H9J9 407 aa17.85■□□□□ 0.45
LDLR-204ENST00000545707 TYW1BQ6NUM6 668 aa17.85■□□□□ 0.45
LDLR-204ENST00000545707 FBXO33Q7Z6M2 555 aa17.85■□□□□ 0.45
LDLR-204ENST00000545707 DYNLL2Q96FJ2 89 aa17.85■□□□□ 0.45
LDLR-204ENST00000545707 ANKZF1Q9H8Y5 726 aa17.85■□□□□ 0.45
LDLR-204ENST00000545707 RWDD2AQ9UIY3 292 aa17.85■□□□□ 0.45
LDLR-204ENST00000545707 CDC23Q9UJX2 597 aa17.85■□□□□ 0.45
LDLR-204ENST00000545707 DOT1LQ8TEK3 1739 aa17.85■□□□□ 0.45
LDLR-204ENST00000545707 PES1O00541 588 aaKnown RBP17.84■□□□□ 0.45
LDLR-204ENST00000545707 SEMA3EO15041 775 aa17.84■□□□□ 0.45
LDLR-204ENST00000545707 CYP2C19P33261 490 aa17.84■□□□□ 0.45
LDLR-204ENST00000545707 LONRF2Q1L5Z9 754 aa17.84■□□□□ 0.45
LDLR-204ENST00000545707 C4orf32Q8N8J7 132 aa17.84■□□□□ 0.45
LDLR-204ENST00000545707 PNKPQ96T60 521 aa17.84■□□□□ 0.45
LDLR-204ENST00000545707 CRNKL1Q9BZJ0 848 aaKnown RBP17.84■□□□□ 0.45
LDLR-204ENST00000545707 MCM9Q9NXL9 1143 aa17.84■□□□□ 0.45
LDLR-204ENST00000545707 TRIM10Q9UDY6 481 aa17.84■□□□□ 0.45
LDLR-204ENST00000545707 TFR2Q9UP52 801 aa17.84■□□□□ 0.45
LDLR-204ENST00000545707 ZNF652Q9Y2D9 606 aa17.84■□□□□ 0.45
LDLR-204ENST00000545707 ORC4O43929 436 aa17.84■□□□□ 0.45
LDLR-204ENST00000545707 KRT9P35527 623 aa17.84■□□□□ 0.45
LDLR-204ENST00000545707 PMS1P54277 932 aaKnown RBP17.84■□□□□ 0.45
LDLR-204ENST00000545707 UBXN1Q04323 297 aa17.84■□□□□ 0.45
LDLR-204ENST00000545707 SF3B3Q15393 1217 aaKnown RBP17.84■□□□□ 0.45
LDLR-204ENST00000545707 SUGCTQ9HAC7 445 aa17.84■□□□□ 0.45
LDLR-204ENST00000545707 LRRC10BA6NIK2 292 aa17.83■□□□□ 0.45
LDLR-204ENST00000545707 RHOXF2BP0C7M4 288 aa17.83■□□□□ 0.45
LDLR-204ENST00000545707 TFAP4Q01664 338 aa17.83■□□□□ 0.45
LDLR-204ENST00000545707 ZNF658Q5TYW1 1059 aaPredicted RBP17.83■□□□□ 0.45
LDLR-204ENST00000545707 TBC1D9BQ66K14 1250 aa17.83■□□□□ 0.45
LDLR-204ENST00000545707 IRF2BP1Q8IU81 584 aa17.83■□□□□ 0.45
LDLR-204ENST00000545707 BLIDQ8IZY5 108 aa17.83■□□□□ 0.45
LDLR-204ENST00000545707 NEK11Q8NG66 645 aa17.83■□□□□ 0.45
LDLR-204ENST00000545707 RHOXF2Q9BQY4 288 aa17.83■□□□□ 0.45
LDLR-204ENST00000545707 UBXN6Q9BZV1 441 aa17.83■□□□□ 0.45
LDLR-204ENST00000545707 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.83■□□□□ 0.45
LDLR-204ENST00000545707 STAT6P42226 847 aa17.83■□□□□ 0.44
LDLR-204ENST00000545707 RASSF8Q8NHQ8 419 aa17.83■□□□□ 0.44
LDLR-204ENST00000545707 TMEM60Q9H2L4 133 aa17.83■□□□□ 0.44
LDLR-204ENST00000545707 IL17RBQ9NRM6 502 aa17.83■□□□□ 0.44
LDLR-204ENST00000545707 CTAGE9A4FU28 777 aa17.82■□□□□ 0.44
LDLR-204ENST00000545707 HIBADHP31937 336 aaKnown RBP17.82■□□□□ 0.44
LDLR-204ENST00000545707 ARHGAP25P42331 645 aa17.82■□□□□ 0.44
LDLR-204ENST00000545707 PHLPP1O60346 1717 aa17.82■□□□□ 0.44
LDLR-204ENST00000545707 ITIH6Q6UXX5 1313 aa17.82■□□□□ 0.44
LDLR-204ENST00000545707 USP17L3A6NCW0 530 aa17.82■□□□□ 0.44
LDLR-204ENST00000545707 USP17L4A6NCW7 530 aa17.82■□□□□ 0.44
LDLR-204ENST00000545707 NAALADL2Q58DX5 795 aa17.82■□□□□ 0.44
LDLR-204ENST00000545707 WWC2Q6AWC2 1192 aa17.82■□□□□ 0.44
LDLR-204ENST00000545707 USP17L1Q7RTZ2 530 aa17.82■□□□□ 0.44
LDLR-204ENST00000545707 TMTC1Q8IUR5 882 aa17.82■□□□□ 0.44
LDLR-204ENST00000545707 LINC00116Q8NCU8 138 aa17.82■□□□□ 0.44
LDLR-204ENST00000545707 CPVLQ9H3G5 476 aa17.82■□□□□ 0.44
LDLR-204ENST00000545707 KAT14Q9H8E8 782 aa17.82■□□□□ 0.44
LDLR-204ENST00000545707 H3BQF6 201 aa17.81■□□□□ 0.44
LDLR-204ENST00000545707 ATP8B1O43520 1251 aa17.81■□□□□ 0.44
LDLR-204ENST00000545707 TRAPPC10P48553 1259 aa17.81■□□□□ 0.44
LDLR-204ENST00000545707 RPS8P62241 208 aaKnown RBP17.81■□□□□ 0.44
LDLR-204ENST00000545707 MCM6Q14566 821 aa17.81■□□□□ 0.44
LDLR-204ENST00000545707 INF2Q27J81 1249 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms