RNA–Protein interactions for RNA: ENST00000545621.5

HMBS-222, Transcript of hydroxymethylbilane synthase, human

TSL 1 (best)

Gene HMBS, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMBS-222	ENST00000545621	FAM83B	Q5T0W9	1011 aa		18.88	■□□□□ 0.61
HMBS-222	ENST00000545621	MB21D1	Q8N884	522 aa		18.88	■□□□□ 0.61
HMBS-222	ENST00000545621	GMCL1	Q96IK5	515 aa		18.88	■□□□□ 0.61
HMBS-222	ENST00000545621	KRT23	Q9C075	422 aa		18.88	■□□□□ 0.61
HMBS-222	ENST00000545621	BTBD7	Q9P203	1132 aa		18.88	■□□□□ 0.61
HMBS-222	ENST00000545621	STX8	Q9UNK0	236 aa		18.88	■□□□□ 0.61
HMBS-222	ENST00000545621	HPS5	Q9UPZ3	1129 aa		18.88	■□□□□ 0.61
HMBS-222	ENST00000545621	RBM8A	Q9Y5S9	174 aa	Known RBP	18.88	■□□□□ 0.61
HMBS-222	ENST00000545621	KDM4A	O75164	1064 aa		18.87	■□□□□ 0.61
HMBS-222	ENST00000545621	FMNL1	O95466	1100 aa	Predicted RBP	18.87	■□□□□ 0.61
HMBS-222	ENST00000545621	HOXD10	P28358	340 aa		18.87	■□□□□ 0.61
HMBS-222	ENST00000545621	KIAA1211	Q6ZU35	1233 aa		18.87	■□□□□ 0.61
HMBS-222	ENST00000545621	ANKS1A	Q92625	1134 aa		18.87	■□□□□ 0.61
HMBS-222	ENST00000545621	NUP88	Q99567	741 aa	Predicted RBP	18.87	■□□□□ 0.61
HMBS-222	ENST00000545621	FBXO28	Q9NVF7	368 aa		18.87	■□□□□ 0.61
HMBS-222	ENST00000545621	ZSWIM5	Q9P217	1185 aa		18.87	■□□□□ 0.61
HMBS-222	ENST00000545621	PPP1R9A	Q9ULJ8	1098 aa		18.87	■□□□□ 0.61
HMBS-222	ENST00000545621	TOP1	P11387	765 aa	Known RBP	18.86	■□□□□ 0.61
HMBS-222	ENST00000545621	NECTIN1	Q15223	517 aa		18.86	■□□□□ 0.61
HMBS-222	ENST00000545621	SLFN13	Q68D06	897 aa		18.86	■□□□□ 0.61
HMBS-222	ENST00000545621	CASC1	Q6TDU7	716 aa		18.86	■□□□□ 0.61
HMBS-222	ENST00000545621	DGKH	Q86XP1	1220 aa		18.86	■□□□□ 0.61
HMBS-222	ENST00000545621	ATG4C	Q96DT6	458 aa		18.86	■□□□□ 0.61
HMBS-222	ENST00000545621	TMEM47	Q9BQJ4	181 aa		18.86	■□□□□ 0.61
HMBS-222	ENST00000545621	PAGR1	Q9BTK6	254 aa		18.86	■□□□□ 0.61
HMBS-222	ENST00000545621	PTCH2	Q9Y6C5	1203 aa		18.86	■□□□□ 0.61
HMBS-222	ENST00000545621	TAF6L	Q9Y6J9	622 aa		18.86	■□□□□ 0.61
HMBS-222	ENST00000545621	TNPO2	O14787	897 aa	Known RBP	18.85	■□□□□ 0.61
HMBS-222	ENST00000545621	PLA2G6	O60733	806 aa		18.85	■□□□□ 0.61
HMBS-222	ENST00000545621	IRF5	Q13568	498 aa		18.85	■□□□□ 0.61
HMBS-222	ENST00000545621	CCDC178	Q5BJE1	867 aa		18.85	■□□□□ 0.61
HMBS-222	ENST00000545621	STOX1	Q6ZVD7	989 aa		18.85	■□□□□ 0.61
HMBS-222	ENST00000545621	IQCA1	Q86XH1	822 aa		18.85	■□□□□ 0.61
HMBS-222	ENST00000545621	REPS2	Q8NFH8	660 aa		18.85	■□□□□ 0.61
HMBS-222	ENST00000545621	PORCN	Q9H237	461 aa		18.85	■□□□□ 0.61
HMBS-222	ENST00000545621	GJD2	Q9UKL4	321 aa		18.85	■□□□□ 0.61
HMBS-222	ENST00000545621	BAZ2B	Q9UIF8	2168 aa	Known RBP	18.84	■□□□□ 0.61
HMBS-222	ENST00000545621		E7EWF7	191 aa		18.84	■□□□□ 0.61
HMBS-222	ENST00000545621	VWA5A	O00534	786 aa		18.84	■□□□□ 0.61
HMBS-222	ENST00000545621	BMP3	P12645	472 aa		18.84	■□□□□ 0.61
HMBS-222	ENST00000545621	MAPK4	P31152	587 aa		18.84	■□□□□ 0.61
HMBS-222	ENST00000545621	CCNA1	P78396	465 aa		18.84	■□□□□ 0.61
HMBS-222	ENST00000545621	PRKCZ	Q05513	592 aa		18.84	■□□□□ 0.61
HMBS-222	ENST00000545621	PRPF38A	Q8NAV1	312 aa	Known RBP	18.84	■□□□□ 0.61
HMBS-222	ENST00000545621	COA7	Q96BR5	231 aa		18.84	■□□□□ 0.61
HMBS-222	ENST00000545621	ARMC5	Q96C12	935 aa		18.84	■□□□□ 0.61
HMBS-222	ENST00000545621	SLF1	Q9BQI6	1058 aa		18.84	■□□□□ 0.61
HMBS-222	ENST00000545621	ANO2	Q9NQ90	1003 aa		18.84	■□□□□ 0.61
HMBS-222	ENST00000545621	FEM1B	Q9UK73	627 aa		18.84	■□□□□ 0.61
HMBS-222	ENST00000545621	GABRQ	Q9UN88	632 aa		18.84	■□□□□ 0.61
HMBS-222	ENST00000545621	MCM3AP	O60318	1980 aa		18.83	■□□□□ 0.61
HMBS-222	ENST00000545621	ECM2	O94769	699 aa	Predicted RBP	18.83	■□□□□ 0.6
HMBS-222	ENST00000545621	SNHG28	P0DPA3	235 aa		18.83	■□□□□ 0.6
HMBS-222	ENST00000545621	ENAH	Q8N8S7	591 aa	Predicted RBP	18.83	■□□□□ 0.6
HMBS-222	ENST00000545621	SHCBP1	Q8NEM2	672 aa		18.83	■□□□□ 0.6
HMBS-222	ENST00000545621	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	18.83	■□□□□ 0.6
HMBS-222	ENST00000545621	ZKSCAN3	Q9BRR0	538 aa		18.83	■□□□□ 0.6
HMBS-222	ENST00000545621	SPATC1L	Q9H0A9	340 aa		18.83	■□□□□ 0.6
HMBS-222	ENST00000545621	ZNF214	Q9UL59	606 aa	Predicted RBP	18.83	■□□□□ 0.6
HMBS-222	ENST00000545621	FRMPD3	Q5JV73	1810 aa		18.83	■□□□□ 0.6
HMBS-222	ENST00000545621	LCT	P09848	1927 aa		18.82	■□□□□ 0.6
HMBS-222	ENST00000545621	SLC27A2	O14975	620 aa		18.82	■□□□□ 0.6
HMBS-222	ENST00000545621	ATP2A1	O14983	1001 aa		18.82	■□□□□ 0.6
HMBS-222	ENST00000545621	RAD21	O60216	631 aa		18.82	■□□□□ 0.6
HMBS-222	ENST00000545621	MCC	P23508	829 aa		18.82	■□□□□ 0.6
HMBS-222	ENST00000545621	SLC1A4	P43007	532 aa		18.82	■□□□□ 0.6
HMBS-222	ENST00000545621	FLT3LG	P49771	235 aa		18.82	■□□□□ 0.6
HMBS-222	ENST00000545621	TRDN	Q13061	729 aa		18.82	■□□□□ 0.6
HMBS-222	ENST00000545621	TMEM132B	Q14DG7	1078 aa		18.82	■□□□□ 0.6
HMBS-222	ENST00000545621	SEC23A	Q15436	765 aa		18.82	■□□□□ 0.6
HMBS-222	ENST00000545621	IFFO2	Q5TF58	517 aa		18.82	■□□□□ 0.6
HMBS-222	ENST00000545621	CYB5R4	Q7L1T6	521 aa		18.82	■□□□□ 0.6
HMBS-222	ENST00000545621	GPR142	Q7Z601	462 aa		18.82	■□□□□ 0.6
HMBS-222	ENST00000545621	NCOA7	Q8NI08	942 aa		18.82	■□□□□ 0.6
HMBS-222	ENST00000545621	DCAF4	Q8WV16	495 aa		18.82	■□□□□ 0.6
HMBS-222	ENST00000545621	USP6NL	Q92738	828 aa		18.82	■□□□□ 0.6
HMBS-222	ENST00000545621	MOV10L1	Q9BXT6	1211 aa	Known RBP	18.82	■□□□□ 0.6
HMBS-222	ENST00000545621	TNKS	O95271	1327 aa		18.81	■□□□□ 0.6
HMBS-222	ENST00000545621	FDX1	P10109	184 aa		18.81	■□□□□ 0.6
HMBS-222	ENST00000545621	PDHB	P11177	359 aa		18.81	■□□□□ 0.6
HMBS-222	ENST00000545621	STAT2	P52630	851 aa		18.81	■□□□□ 0.6
HMBS-222	ENST00000545621	MORN1	Q5T089	497 aa		18.81	■□□□□ 0.6
HMBS-222	ENST00000545621	CREB3L3	Q68CJ9	461 aa		18.81	■□□□□ 0.6
HMBS-222	ENST00000545621	RASGRP2	Q7LDG7	609 aa		18.81	■□□□□ 0.6
HMBS-222	ENST00000545621	MB21D2	Q8IYB1	491 aa	Predicted RBP	18.81	■□□□□ 0.6
HMBS-222	ENST00000545621	PXYLP1	Q8TE99	480 aa		18.81	■□□□□ 0.6
HMBS-222	ENST00000545621	TSGA10IP	Q3SY00	556 aa		18.8	■□□□□ 0.6
HMBS-222	ENST00000545621	BTNL9	Q6UXG8	535 aa		18.8	■□□□□ 0.6
HMBS-222	ENST00000545621	PLEKHH3	Q7Z736	793 aa		18.8	■□□□□ 0.6
HMBS-222	ENST00000545621	FAM160B2	Q86V87	743 aa		18.8	■□□□□ 0.6
HMBS-222	ENST00000545621	CHURC1	Q8WUH1	139 aa		18.8	■□□□□ 0.6
HMBS-222	ENST00000545621	SOCS4	Q8WXH5	440 aa		18.8	■□□□□ 0.6
HMBS-222	ENST00000545621	ZNF333	Q96JL9	665 aa		18.8	■□□□□ 0.6
HMBS-222	ENST00000545621	SLC38A10	Q9HBR0	1119 aa		18.8	■□□□□ 0.6
HMBS-222	ENST00000545621	TMEM232	C9JQI7	657 aa		18.79	■□□□□ 0.6
HMBS-222	ENST00000545621	EPB41L2	O43491	1005 aa	Known RBP	18.79	■□□□□ 0.6
HMBS-222	ENST00000545621	XRCC5	P13010	732 aa	Known RBP	18.79	■□□□□ 0.6
HMBS-222	ENST00000545621	GRB14	Q14449	540 aa		18.79	■□□□□ 0.6
HMBS-222	ENST00000545621	SLC9C1	Q4G0N8	1177 aa		18.79	■□□□□ 0.6
HMBS-222	ENST00000545621	KCTD1	Q719H9	257 aa		18.79	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms