RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 CRHR2Q13324 411 aa9.35□□□□□ -0.91
SNHG1-223ENST00000545440 SNAPC2Q13487 334 aa9.35□□□□□ -0.91
SNHG1-223ENST00000545440 PICALMQ13492 652 aa9.35□□□□□ -0.91
SNHG1-223ENST00000545440 PKN2Q16513 984 aaKnown RBP9.35□□□□□ -0.91
SNHG1-223ENST00000545440 CCL15Q16663 113 aa9.35□□□□□ -0.91
SNHG1-223ENST00000545440 C20orf194Q5TEA3 1177 aa9.35□□□□□ -0.91
SNHG1-223ENST00000545440 VASH1Q7L8A9 365 aaPredicted RBP9.35□□□□□ -0.91
SNHG1-223ENST00000545440 ZSCAN29Q8IWY8 852 aaPredicted RBP9.35□□□□□ -0.91
SNHG1-223ENST00000545440 ZFPM1Q8IX07 1006 aa9.35□□□□□ -0.91
SNHG1-223ENST00000545440 CLASRPQ8N2M8 674 aaKnown RBP9.35□□□□□ -0.91
SNHG1-223ENST00000545440 BRI3BPQ8WY22 251 aa9.35□□□□□ -0.91
SNHG1-223ENST00000545440 PTPN18Q99952 460 aa9.35□□□□□ -0.91
SNHG1-223ENST00000545440 NOL10Q9BSC4 688 aaKnown RBP9.35□□□□□ -0.91
SNHG1-223ENST00000545440 CCDC8Q9H0W5 538 aaPredicted RBP9.35□□□□□ -0.91
SNHG1-223ENST00000545440 DOLKQ9UPQ8 538 aa9.35□□□□□ -0.91
SNHG1-223ENST00000545440 PARP14Q460N5 1801 aa9.34□□□□□ -0.91
SNHG1-223ENST00000545440 DDTLA6NHG4 134 aaPredicted RBP9.34□□□□□ -0.91
SNHG1-223ENST00000545440 USP17L5A8MUK1 530 aa9.34□□□□□ -0.91
SNHG1-223ENST00000545440 PHF20L1A8MW92 1017 aa9.34□□□□□ -0.91
SNHG1-223ENST00000545440 SLC19A1P41440 591 aa9.34□□□□□ -0.91
SNHG1-223ENST00000545440 ZAP70P43403 619 aa9.34□□□□□ -0.91
SNHG1-223ENST00000545440 ARID5BQ14865 1188 aa9.34□□□□□ -0.91
SNHG1-223ENST00000545440 ADGRA1Q86SQ6 560 aa9.34□□□□□ -0.91
SNHG1-223ENST00000545440 TRIM50Q86XT4 487 aa9.34□□□□□ -0.91
SNHG1-223ENST00000545440 CERS3Q8IU89 383 aa9.34□□□□□ -0.91
SNHG1-223ENST00000545440 TEX11Q8IYF3 940 aa9.34□□□□□ -0.91
SNHG1-223ENST00000545440 TRMT44Q8IYL2 757 aaKnown RBP9.34□□□□□ -0.91
SNHG1-223ENST00000545440 SCYL3Q8IZE3 742 aa9.34□□□□□ -0.91
SNHG1-223ENST00000545440 PLPP7Q8NBV4 271 aa9.34□□□□□ -0.91
SNHG1-223ENST00000545440 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.34□□□□□ -0.91
SNHG1-223ENST00000545440 UCN2Q96RP3 112 aa9.34□□□□□ -0.91
SNHG1-223ENST00000545440 OSBPL5Q9H0X9 879 aaPredicted RBP9.34□□□□□ -0.91
SNHG1-223ENST00000545440 R3HDMLQ9H3Y0 253 aa9.34□□□□□ -0.91
SNHG1-223ENST00000545440 IL1RAPL2Q9NP60 686 aa9.34□□□□□ -0.91
SNHG1-223ENST00000545440 PIH1D3Q9NQM4 214 aaKnown RBP9.34□□□□□ -0.91
SNHG1-223ENST00000545440 AATFQ9NY61 560 aaKnown RBP eCLIP9.34□□□□□ -0.911e-323■■■□□ 16.4
SNHG1-223ENST00000545440 PLA2G2EQ9NZK7 142 aa9.34□□□□□ -0.91
SNHG1-223ENST00000545440 KCNH4Q9UQ05 1017 aa9.34□□□□□ -0.91
SNHG1-223ENST00000545440 KIAA0100Q14667 2235 aaKnown RBP9.33□□□□□ -0.92
SNHG1-223ENST00000545440 CTNND1O60716 968 aaKnown RBP9.33□□□□□ -0.92
SNHG1-223ENST00000545440 IDH1O75874 414 aaKnown RBP9.33□□□□□ -0.92
SNHG1-223ENST00000545440 TAF1CQ15572 869 aaPredicted RBP9.33□□□□□ -0.92
SNHG1-223ENST00000545440 USP17L2Q6R6M4 530 aa9.33□□□□□ -0.92
SNHG1-223ENST00000545440 PLEKHM2Q8IWE5 1019 aa9.33□□□□□ -0.92
SNHG1-223ENST00000545440 FAM43AQ8N2R8 423 aa9.33□□□□□ -0.92
SNHG1-223ENST00000545440 SH3RF3Q8TEJ3 882 aaPredicted RBP9.33□□□□□ -0.92
SNHG1-223ENST00000545440 ERO1AQ96HE7 468 aa9.33□□□□□ -0.92
SNHG1-223ENST00000545440 OCSTAMPQ9BR26 566 aa9.33□□□□□ -0.92
SNHG1-223ENST00000545440 PICK1Q9NRD5 415 aa9.33□□□□□ -0.92
SNHG1-223ENST00000545440 PDE4DIPQ5VU43 2346 aa9.33□□□□□ -0.92
SNHG1-223ENST00000545440 FLT1P17948 1338 aa9.32□□□□□ -0.92
SNHG1-223ENST00000545440 HTTP42858 3142 aa9.32□□□□□ -0.92
SNHG1-223ENST00000545440 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.32□□□□□ -0.92
SNHG1-223ENST00000545440 CCDC85CA6NKD9 419 aa9.32□□□□□ -0.92
SNHG1-223ENST00000545440 MYCP01106 439 aaPredicted RBP9.32□□□□□ -0.92
SNHG1-223ENST00000545440 IFIT2P09913 472 aaKnown RBP9.32□□□□□ -0.92
SNHG1-223ENST00000545440 ATP1A2P50993 1020 aa9.32□□□□□ -0.92
SNHG1-223ENST00000545440 MAP3K12Q12852 859 aa9.32□□□□□ -0.92
SNHG1-223ENST00000545440 TTF1Q15361 905 aaPredicted RBP9.32□□□□□ -0.92
SNHG1-223ENST00000545440 C1QTNF2Q9BXJ5 285 aa9.32□□□□□ -0.92
SNHG1-223ENST00000545440 DHX36Q9H2U1 1008 aaKnown RBP9.32□□□□□ -0.92
SNHG1-223ENST00000545440 ZFYVE28Q9HCC9 887 aa9.32□□□□□ -0.92
SNHG1-223ENST00000545440 HERC5Q9UII4 1024 aaKnown RBP9.32□□□□□ -0.92
SNHG1-223ENST00000545440 NOD1Q9Y239 953 aa9.32□□□□□ -0.92
SNHG1-223ENST00000545440 GREB1LQ9C091 1923 aaPredicted RBP9.31□□□□□ -0.92
SNHG1-223ENST00000545440 MYH4Q9Y623 1939 aa9.31□□□□□ -0.92
SNHG1-223ENST00000545440 BTBD19C9JJ37 291 aa9.31□□□□□ -0.92
SNHG1-223ENST00000545440 CXCL11O14625 94 aa9.31□□□□□ -0.92
SNHG1-223ENST00000545440 PTPRAP18433 802 aa9.31□□□□□ -0.92
SNHG1-223ENST00000545440 CYP7A1P22680 504 aa9.31□□□□□ -0.92
SNHG1-223ENST00000545440 SP3Q02447 781 aa9.31□□□□□ -0.92
SNHG1-223ENST00000545440 DHX9Q08211 1270 aaKnown RBP9.31□□□□□ -0.92
SNHG1-223ENST00000545440 USP4Q13107 963 aa9.31□□□□□ -0.92
SNHG1-223ENST00000545440 FBXO46Q6PJ61 603 aaPredicted RBP9.31□□□□□ -0.92
SNHG1-223ENST00000545440 ANKRD23Q86SG2 305 aa9.31□□□□□ -0.92
SNHG1-223ENST00000545440 MAGEB6Q8N7X4 407 aa9.31□□□□□ -0.92
SNHG1-223ENST00000545440 TGFBRAP1Q8WUH2 860 aa9.31□□□□□ -0.92
SNHG1-223ENST00000545440 KCTD15Q96SI1 283 aaPredicted RBP9.31□□□□□ -0.92
SNHG1-223ENST00000545440 LRRCC1Q9C099 1032 aa9.31□□□□□ -0.92
SNHG1-223ENST00000545440 ANTXR1Q9H6X2 564 aa9.31□□□□□ -0.92
SNHG1-223ENST00000545440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.31□□□□□ -0.92
SNHG1-223ENST00000545440 PI4KBQ9UBF8 816 aa9.31□□□□□ -0.92
SNHG1-223ENST00000545440 ADGRA2Q96PE1 1338 aa9.31□□□□□ -0.92
SNHG1-223ENST00000545440 A0A0G2JLL6 359 aaPredicted RBP9.3□□□□□ -0.92
SNHG1-223ENST00000545440 PIK3CDO00329 1044 aa9.3□□□□□ -0.92
SNHG1-223ENST00000545440 TLR2O60603 784 aa9.3□□□□□ -0.92
SNHG1-223ENST00000545440 RRP1P56182 461 aaKnown RBP9.3□□□□□ -0.92
SNHG1-223ENST00000545440 MOGSQ13724 837 aa9.3□□□□□ -0.92
SNHG1-223ENST00000545440 OTOP1Q7RTM1 612 aa9.3□□□□□ -0.92
SNHG1-223ENST00000545440 PRRT2Q7Z6L0 340 aaPredicted RBP9.3□□□□□ -0.92
SNHG1-223ENST00000545440 METTL16Q86W50 562 aaKnown RBP9.3□□□□□ -0.92
SNHG1-223ENST00000545440 MAPKAPK5Q8IW41 473 aa9.3□□□□□ -0.92
SNHG1-223ENST00000545440 PARK7Q99497 189 aaKnown RBP9.3□□□□□ -0.92
SNHG1-223ENST00000545440 MAP4K5Q9Y4K4 846 aa9.3□□□□□ -0.92
SNHG1-223ENST00000545440 AFG3L2Q9Y4W6 797 aa9.3□□□□□ -0.92
SNHG1-223ENST00000545440 TRIM17Q9Y577 477 aa9.3□□□□□ -0.92
SNHG1-223ENST00000545440 PLXNB2O15031 1838 aa9.3□□□□□ -0.92
SNHG1-223ENST00000545440 CENPFP49454 3210 aa9.3□□□□□ -0.92
SNHG1-223ENST00000545440 A0A0G2JMZ2 1700 aa9.29□□□□□ -0.92
SNHG1-223ENST00000545440 FAM196BA6NMK8 535 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms