RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 SCG2P13521 617 aa26.38■■□□□ 1.81
FOXA1-202ENST00000545425 GNAQP50148 359 aa26.38■■□□□ 1.81
FOXA1-202ENST00000545425 RPS8P62241 208 aaKnown RBP26.38■■□□□ 1.81
FOXA1-202ENST00000545425 TUBB2AQ13885 445 aa26.38■■□□□ 1.81
FOXA1-202ENST00000545425 ELF2Q15723 593 aa26.38■■□□□ 1.81
FOXA1-202ENST00000545425 PFKFB3Q16875 520 aaPredicted RBP26.38■■□□□ 1.81
FOXA1-202ENST00000545425 KMT5BQ4FZB7 885 aa26.38■■□□□ 1.81
FOXA1-202ENST00000545425 CERS3Q8IU89 383 aa26.38■■□□□ 1.81
FOXA1-202ENST00000545425 DHX58Q96C10 678 aa26.38■■□□□ 1.81
FOXA1-202ENST00000545425 ARID3AQ99856 593 aa26.38■■□□□ 1.81
FOXA1-202ENST00000545425 TUBB2BQ9BVA1 445 aa26.38■■□□□ 1.81
FOXA1-202ENST00000545425 USP17L12C9JPN9 530 aa26.37■■□□□ 1.81
FOXA1-202ENST00000545425 AKR1B15C9JRZ8 316 aaPredicted RBP26.37■■□□□ 1.81
FOXA1-202ENST00000545425 USP17L21D6R901 530 aa26.37■■□□□ 1.81
FOXA1-202ENST00000545425 HIBADHP31937 336 aaKnown RBP26.37■■□□□ 1.81
FOXA1-202ENST00000545425 CDKAL1Q5VV42 579 aa26.37■■□□□ 1.81
FOXA1-202ENST00000545425 GALNT17Q6IS24 598 aa26.37■■□□□ 1.81
FOXA1-202ENST00000545425 CMTR1Q8N1G2 835 aaKnown RBP26.37■■□□□ 1.81
FOXA1-202ENST00000545425 SYMPKQ92797 1274 aaKnown RBP26.37■■□□□ 1.81
FOXA1-202ENST00000545425 NLRP3Q96P20 1036 aa26.37■■□□□ 1.81
FOXA1-202ENST00000545425 UTRNP46939 3433 aa26.37■■□□□ 1.81
FOXA1-202ENST00000545425 DYNLL1P63167 89 aaKnown RBP26.37■■□□□ 1.81
FOXA1-202ENST00000545425 DGKHQ86XP1 1220 aa26.37■■□□□ 1.81
FOXA1-202ENST00000545425 DCP1AQ9NPI6 582 aaPredicted RBP26.37■■□□□ 1.81
FOXA1-202ENST00000545425 BAZ2AQ9UIF9 1905 aaKnown RBP26.36■■□□□ 1.81
FOXA1-202ENST00000545425 ATP8B1O43520 1251 aa26.36■■□□□ 1.81
FOXA1-202ENST00000545425 PLEKHA8P1O95397 391 aa26.36■■□□□ 1.81
FOXA1-202ENST00000545425 TUBB4BP68371 445 aa26.36■■□□□ 1.81
FOXA1-202ENST00000545425 BMS1Q14692 1282 aaKnown RBP26.36■■□□□ 1.81
FOXA1-202ENST00000545425 NPY5RQ15761 445 aa26.36■■□□□ 1.81
FOXA1-202ENST00000545425 PDILTQ8N807 584 aa26.36■■□□□ 1.81
FOXA1-202ENST00000545425 MNS1Q8NEH6 495 aa26.36■■□□□ 1.81
FOXA1-202ENST00000545425 TAOK2Q9UL54 1235 aa26.36■■□□□ 1.81
FOXA1-202ENST00000545425 SERPINB2P05120 415 aa26.35■■□□□ 1.81
FOXA1-202ENST00000545425 MYL1P05976 194 aa26.35■■□□□ 1.81
FOXA1-202ENST00000545425 LONP1P36776 959 aaKnown RBP26.35■■□□□ 1.81
FOXA1-202ENST00000545425 MECOMQ03112 1051 aa26.35■■□□□ 1.81
FOXA1-202ENST00000545425 TRIM14Q14142 442 aa26.35■■□□□ 1.81
FOXA1-202ENST00000545425 FBXO38Q6PIJ6 1188 aa26.35■■□□□ 1.81
FOXA1-202ENST00000545425 PPFIBP1Q86W92 1011 aa26.35■■□□□ 1.81
FOXA1-202ENST00000545425 UBXN4Q92575 508 aa26.35■■□□□ 1.81
FOXA1-202ENST00000545425 SHISA4Q96DD7 197 aa26.35■■□□□ 1.81
FOXA1-202ENST00000545425 VWA3AA6NCI4 1184 aa26.35■■□□□ 1.81
FOXA1-202ENST00000545425 GTPBP6O43824 516 aaPredicted RBP26.35■■□□□ 1.81
FOXA1-202ENST00000545425 KIF20AO95235 890 aa26.35■■□□□ 1.81
FOXA1-202ENST00000545425 ATP2B1P20020 1258 aa26.35■■□□□ 1.81
FOXA1-202ENST00000545425 TXLNAP40222 546 aa26.35■■□□□ 1.81
FOXA1-202ENST00000545425 NAA30Q147X3 362 aaPredicted RBP26.35■■□□□ 1.81
FOXA1-202ENST00000545425 ANKRD20A12PQ8NF67 263 aa26.35■■□□□ 1.81
FOXA1-202ENST00000545425 COL4A1P02462 1669 aa26.35■■□□□ 1.81
FOXA1-202ENST00000545425 NLRP5P59047 1200 aa26.34■■□□□ 1.81
FOXA1-202ENST00000545425 BICDL1Q6ZP65 573 aa26.34■■□□□ 1.81
FOXA1-202ENST00000545425 ROBO3Q96MS0 1386 aa26.33■■□□□ 1.81
FOXA1-202ENST00000545425 SPDYE4A6NLX3 237 aa26.33■■□□□ 1.81
FOXA1-202ENST00000545425 DPEP1P16444 411 aa26.33■■□□□ 1.81
FOXA1-202ENST00000545425 FECHP22830 423 aa26.33■■□□□ 1.81
FOXA1-202ENST00000545425 CASQ1P31415 396 aa26.33■■□□□ 1.81
FOXA1-202ENST00000545425 PBX1P40424 430 aa26.33■■□□□ 1.81
FOXA1-202ENST00000545425 TBC1D9BQ66K14 1250 aa26.33■■□□□ 1.81
FOXA1-202ENST00000545425 CNGA4Q8IV77 575 aa26.33■■□□□ 1.81
FOXA1-202ENST00000545425 ZNF384Q8TF68 577 aa26.33■■□□□ 1.81
FOXA1-202ENST00000545425 ADD3Q9UEY8 706 aaKnown RBP26.33■■□□□ 1.81
FOXA1-202ENST00000545425 CCDC175P0C221 793 aa26.32■■□□□ 1.8
FOXA1-202ENST00000545425 PTGDRQ13258 359 aa26.32■■□□□ 1.8
FOXA1-202ENST00000545425 E2F4Q16254 413 aa26.32■■□□□ 1.8
FOXA1-202ENST00000545425 USP49Q70CQ1 688 aa26.32■■□□□ 1.8
FOXA1-202ENST00000545425 APTXQ7Z2E3 356 aaKnown RBP26.32■■□□□ 1.8
FOXA1-202ENST00000545425 SRBD1Q8N5C6 995 aaKnown RBP26.32■■□□□ 1.8
FOXA1-202ENST00000545425 EPSTI1Q96J88 318 aa26.32■■□□□ 1.8
FOXA1-202ENST00000545425 SETDB2Q96T68 719 aa26.32■■□□□ 1.8
FOXA1-202ENST00000545425 RWDD2AQ9UIY3 292 aa26.32■■□□□ 1.8
FOXA1-202ENST00000545425 KIF13BQ9NQT8 1826 aa26.32■■□□□ 1.8
FOXA1-202ENST00000545425 LRRC10BA6NIK2 292 aa26.32■■□□□ 1.8
FOXA1-202ENST00000545425 GSTO1P78417 241 aa26.32■■□□□ 1.8
FOXA1-202ENST00000545425 CELF1Q92879 486 aaKnown RBP26.32■■□□□ 1.8
FOXA1-202ENST00000545425 MED15Q96RN5 788 aa26.32■■□□□ 1.8
FOXA1-202ENST00000545425 LZTS2Q9BRK4 669 aa26.32■■□□□ 1.8
FOXA1-202ENST00000545425 SAMSN1Q9NSI8 373 aaKnown RBP26.32■■□□□ 1.8
FOXA1-202ENST00000545425 TCP11L1Q9NUJ3 509 aa26.32■■□□□ 1.8
FOXA1-202ENST00000545425 GOLGB1Q14789 3259 aaKnown RBP26.32■■□□□ 1.8
FOXA1-202ENST00000545425 PPP1R3GB7ZBB8 358 aa26.31■■□□□ 1.8
FOXA1-202ENST00000545425 AMOTL1Q8IY63 956 aa26.31■■□□□ 1.8
FOXA1-202ENST00000545425 GRAMD1CQ8IYS0 662 aa26.31■■□□□ 1.8
FOXA1-202ENST00000545425 DAGLBQ8NCG7 672 aa26.31■■□□□ 1.8
FOXA1-202ENST00000545425 LIMA1Q9UHB6 759 aaKnown RBP26.31■■□□□ 1.8
FOXA1-202ENST00000545425 A0A087X0B3 334 aa26.3■■□□□ 1.8
FOXA1-202ENST00000545425 LAD1O00515 517 aa26.3■■□□□ 1.8
FOXA1-202ENST00000545425 TADA3O75528 432 aa26.3■■□□□ 1.8
FOXA1-202ENST00000545425 MAP3K9P80192 1104 aa26.3■■□□□ 1.8
FOXA1-202ENST00000545425 C3orf67Q6ZVT6 689 aa26.3■■□□□ 1.8
FOXA1-202ENST00000545425 TRMT44Q8IYL2 757 aaKnown RBP26.3■■□□□ 1.8
FOXA1-202ENST00000545425 CCDC148Q8NFR7 591 aa26.3■■□□□ 1.8
FOXA1-202ENST00000545425 TSPY2A6NKD2 308 aa26.3■■□□□ 1.8
FOXA1-202ENST00000545425 URI1O94763 535 aaPredicted RBP26.3■■□□□ 1.8
FOXA1-202ENST00000545425 ZNF174Q15697 407 aa26.3■■□□□ 1.8
FOXA1-202ENST00000545425 EARS2Q5JPH6 523 aaKnown RBP26.3■■□□□ 1.8
FOXA1-202ENST00000545425 TPTE2Q6XPS3 522 aa26.3■■□□□ 1.8
FOXA1-202ENST00000545425 WDR66Q8TBY9 1149 aa26.3■■□□□ 1.8
FOXA1-202ENST00000545425 KAT14Q9H8E8 782 aa26.3■■□□□ 1.8
FOXA1-202ENST00000545425 PRDM4Q9UKN5 801 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms