RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 RBM47A0AV96 593 aaKnown RBP8.72□□□□□ -1.01
LDHA-223ENST00000545215 SOBPA7XYQ1 873 aa8.72□□□□□ -1.01
LDHA-223ENST00000545215 KIAA0355O15063 1070 aa8.72□□□□□ -1.01
LDHA-223ENST00000545215 RAG1P15918 1043 aa8.72□□□□□ -1.01
LDHA-223ENST00000545215 SERPINB4P48594 390 aa8.72□□□□□ -1.01
LDHA-223ENST00000545215 CFAP100Q494V2 611 aa8.72□□□□□ -1.01
LDHA-223ENST00000545215 NYAP1Q6ZVC0 841 aa8.72□□□□□ -1.01
LDHA-223ENST00000545215 NLRP10Q86W26 655 aa8.72□□□□□ -1.01
LDHA-223ENST00000545215 LURAP1LQ8IV03 231 aa8.72□□□□□ -1.01
LDHA-223ENST00000545215 WRNIP1Q96S55 665 aa8.72□□□□□ -1.01
LDHA-223ENST00000545215 FSD1Q9BTV5 496 aa8.72□□□□□ -1.01
LDHA-223ENST00000545215 RRP7AQ9Y3A4 280 aaKnown RBP8.72□□□□□ -1.01
LDHA-223ENST00000545215 DAGLAQ9Y4D2 1042 aa8.72□□□□□ -1.01
LDHA-223ENST00000545215 MAGEB6P1A0A0J9YX57 407 aa8.71□□□□□ -1.02
LDHA-223ENST00000545215 H0Y858 1186 aa8.71□□□□□ -1.02
LDHA-223ENST00000545215 XRCC5P13010 732 aaKnown RBP8.71□□□□□ -1.02
LDHA-223ENST00000545215 IRS1P35568 1242 aa8.71□□□□□ -1.02
LDHA-223ENST00000545215 GTF2IP78347 998 aa8.71□□□□□ -1.02
LDHA-223ENST00000545215 LEXMQ3ZCV2 418 aa8.71□□□□□ -1.02
LDHA-223ENST00000545215 TMEM240Q5SV17 173 aa8.71□□□□□ -1.02
LDHA-223ENST00000545215 C16orf59Q7L2K0 433 aa8.71□□□□□ -1.02
LDHA-223ENST00000545215 TRMT44Q8IYL2 757 aaKnown RBP8.71□□□□□ -1.02
LDHA-223ENST00000545215 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.71□□□□□ -1.02
LDHA-223ENST00000545215 MTRQ99707 1265 aa8.71□□□□□ -1.02
LDHA-223ENST00000545215 TMEM39BQ9GZU3 492 aa8.71□□□□□ -1.02
LDHA-223ENST00000545215 COA1Q9GZY4 146 aa8.71□□□□□ -1.02
LDHA-223ENST00000545215 TLR9Q9NR96 1032 aa8.71□□□□□ -1.02
LDHA-223ENST00000545215 BSDC1Q9NW68 430 aaPredicted RBP8.71□□□□□ -1.02
LDHA-223ENST00000545215 SLC45A1Q9Y2W3 748 aa8.71□□□□□ -1.02
LDHA-223ENST00000545215 XDHP47989 1333 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 MED23Q9ULK4 1368 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 CACNA1HO95180 2353 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.7□□□□□ -1.02
LDHA-223ENST00000545215 RFXAPO00287 272 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 HMOX1P09601 288 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 IL9P15248 144 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 ERCC3P19447 782 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 SCNN1AP37088 669 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 SEC13P55735 322 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 TLE2Q04725 743 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 OCLNQ16625 522 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 FAM110CQ1W6H9 321 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 OXLD1Q5BKU9 147 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 C4orf48Q5BLP8 95 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 KRT40Q6A162 431 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 BPHLQ86WA6 291 aaPredicted RBP8.7□□□□□ -1.02
LDHA-223ENST00000545215 SUGP1Q8IWZ8 645 aaKnown RBP8.7□□□□□ -1.02
LDHA-223ENST00000545215 ANKRD13CQ8N6S4 541 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 BAP1Q92560 729 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 LPAR1Q92633 364 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 SLC6A16Q9GZN6 736 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 PANK3Q9H999 370 aa8.7□□□□□ -1.02
LDHA-223ENST00000545215 MYBBP1AQ9BQG0 1328 aaKnown RBP8.69□□□□□ -1.02
LDHA-223ENST00000545215 AK9Q5TCS8 1911 aa8.69□□□□□ -1.02
LDHA-223ENST00000545215 FRMPD3Q5JV73 1810 aa8.69□□□□□ -1.02
LDHA-223ENST00000545215 GVINP1Q7Z2Y8 2422 aa8.69□□□□□ -1.02
LDHA-223ENST00000545215 KMT2EQ8IZD2 1858 aa8.69□□□□□ -1.02
LDHA-223ENST00000545215 CXCL11O14625 94 aa8.69□□□□□ -1.02
LDHA-223ENST00000545215 CLTBP09497 229 aa8.69□□□□□ -1.02
LDHA-223ENST00000545215 MYL6BP14649 208 aa8.69□□□□□ -1.02
LDHA-223ENST00000545215 CYP2B6P20813 491 aa8.69□□□□□ -1.02
LDHA-223ENST00000545215 HERC4Q5GLZ8 1057 aaPredicted RBP8.69□□□□□ -1.02
LDHA-223ENST00000545215 EPHA10Q5JZY3 1008 aa8.69□□□□□ -1.02
LDHA-223ENST00000545215 RNF20Q5VTR2 975 aa8.69□□□□□ -1.02
LDHA-223ENST00000545215 TAS1R3Q7RTX0 852 aa8.69□□□□□ -1.02
LDHA-223ENST00000545215 ZNF511Q8NB15 262 aa8.69□□□□□ -1.02
LDHA-223ENST00000545215 SMCR8Q8TEV9 937 aaPredicted RBP8.69□□□□□ -1.02
LDHA-223ENST00000545215 EDAQ92838 391 aa8.69□□□□□ -1.02
LDHA-223ENST00000545215 FOXJ1Q92949 421 aa8.69□□□□□ -1.02
LDHA-223ENST00000545215 C1QTNF2Q9BXJ5 285 aa8.69□□□□□ -1.02
LDHA-223ENST00000545215 UPF3BQ9BZI7 483 aaKnown RBP8.69□□□□□ -1.02
LDHA-223ENST00000545215 ZNF70Q9UC06 446 aaPredicted RBP8.69□□□□□ -1.02
LDHA-223ENST00000545215 PCDHGA11Q9Y5H2 935 aa8.69□□□□□ -1.02
LDHA-223ENST00000545215 PLXNB2O15031 1838 aa8.69□□□□□ -1.02
LDHA-223ENST00000545215 ESPNB1AK53 854 aa8.68□□□□□ -1.02
LDHA-223ENST00000545215 SLC5A1P13866 664 aa8.68□□□□□ -1.02
LDHA-223ENST00000545215 CCDC102BQ68D86 513 aa8.68□□□□□ -1.02
LDHA-223ENST00000545215 CCDC174Q6PII3 467 aa8.68□□□□□ -1.02
LDHA-223ENST00000545215 FASTKD5Q7L8L6 764 aaKnown RBP8.68□□□□□ -1.02
LDHA-223ENST00000545215 FBXL6Q8N531 539 aa8.68□□□□□ -1.02
LDHA-223ENST00000545215 CERS5Q8N5B7 392 aa8.68□□□□□ -1.02
LDHA-223ENST00000545215 DLL3Q9NYJ7 618 aa8.68□□□□□ -1.02
LDHA-223ENST00000545215 GCN1Q92616 2671 aaKnown RBP8.68□□□□□ -1.02
LDHA-223ENST00000545215 ZNF521Q96K83 1311 aa8.68□□□□□ -1.02
LDHA-223ENST00000545215 TECTAO75443 2155 aa8.68□□□□□ -1.02
LDHA-223ENST00000545215 DMDP11532 3685 aa8.67□□□□□ -1.02
LDHA-223ENST00000545215 TMEM221A6NGB7 291 aa8.67□□□□□ -1.02
LDHA-223ENST00000545215 M0R296 226 aa8.67□□□□□ -1.02
LDHA-223ENST00000545215 PRMT3O60678 531 aa8.67□□□□□ -1.02
LDHA-223ENST00000545215 ZIC2O95409 532 aaPredicted RBP8.67□□□□□ -1.02
LDHA-223ENST00000545215 MORC1Q86VD1 984 aa8.67□□□□□ -1.02
LDHA-223ENST00000545215 TPCN2Q8NHX9 752 aa8.67□□□□□ -1.02
LDHA-223ENST00000545215 ZNF516Q92618 1163 aa8.67□□□□□ -1.02
LDHA-223ENST00000545215 NKD2Q969F2 451 aaPredicted RBP8.67□□□□□ -1.02
LDHA-223ENST00000545215 UBE2ZQ9H832 354 aaPredicted RBP8.67□□□□□ -1.02
LDHA-223ENST00000545215 JAG2Q9Y219 1238 aa8.67□□□□□ -1.02
LDHA-223ENST00000545215 WDR87Q6ZQQ6 2873 aa8.67□□□□□ -1.02
LDHA-223ENST00000545215 ARAP2Q8WZ64 1704 aa8.66□□□□□ -1.02
LDHA-223ENST00000545215 SFI1A8K8P3 1242 aa8.66□□□□□ -1.02
LDHA-223ENST00000545215 TCP10L2B9ZVM9 353 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms