RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 FRMPD2Q68DX3 1309 aaPredicted RBP13.12□□□□□ -0.31
TNC-213ENST00000544972 DDNO94850 711 aaPredicted RBP13.11□□□□□ -0.31
TNC-213ENST00000544972 XBP1P17861 261 aa13.11□□□□□ -0.31
TNC-213ENST00000544972 HIRAP54198 1017 aaPredicted RBP13.11□□□□□ -0.31
TNC-213ENST00000544972 NR5A1Q13285 461 aa13.11□□□□□ -0.31
TNC-213ENST00000544972 ASPRV1Q53RT3 343 aa13.11□□□□□ -0.31
TNC-213ENST00000544972 NOSTRINQ8IVI9 506 aa13.11□□□□□ -0.31
TNC-213ENST00000544972 PGBD1Q96JS3 809 aa13.11□□□□□ -0.31
TNC-213ENST00000544972 CABP5Q9NP86 173 aa13.11□□□□□ -0.31
TNC-213ENST00000544972 RTEL1Q9NZ71 1219 aa13.11□□□□□ -0.31
TNC-213ENST00000544972 A0A1W2PRG0 241 aa13.11□□□□□ -0.31
TNC-213ENST00000544972 SAFBQ15424 915 aaKnown RBP eCLIP13.11□□□□□ -0.31
TNC-213ENST00000544972 C9orf131Q5VYM1 1079 aa13.11□□□□□ -0.31
TNC-213ENST00000544972 TYW1BQ6NUM6 668 aa13.11□□□□□ -0.31
TNC-213ENST00000544972 UBA5Q9GZZ9 404 aa13.11□□□□□ -0.31
TNC-213ENST00000544972 DEFB129Q9H1M3 183 aa13.11□□□□□ -0.31
TNC-213ENST00000544972 POLR3EQ9NVU0 708 aa13.11□□□□□ -0.31
TNC-213ENST00000544972 TMEM63CQ9P1W3 806 aa13.11□□□□□ -0.31
TNC-213ENST00000544972 CLIC4Q9Y696 253 aa13.11□□□□□ -0.31
TNC-213ENST00000544972 PHF20L1A8MW92 1017 aa13.1□□□□□ -0.31
TNC-213ENST00000544972 CAP2P40123 477 aa13.1□□□□□ -0.31
TNC-213ENST00000544972 NASPP49321 788 aaPredicted RBP13.1□□□□□ -0.31
TNC-213ENST00000544972 GNL2Q13823 731 aaKnown RBP13.1□□□□□ -0.31
TNC-213ENST00000544972 GSE1Q14687 1217 aa13.1□□□□□ -0.31
TNC-213ENST00000544972 ANGEL2Q5VTE6 544 aaKnown RBP13.1□□□□□ -0.31
TNC-213ENST00000544972 WWC2Q6AWC2 1192 aa13.1□□□□□ -0.31
TNC-213ENST00000544972 CAVIN1Q6NZI2 390 aaKnown RBP13.1□□□□□ -0.31
TNC-213ENST00000544972 GPKOWQ92917 476 aaPredicted RBP eCLIP13.1□□□□□ -0.31
TNC-213ENST00000544972 TNFRSF25Q93038 417 aa13.1□□□□□ -0.31
TNC-213ENST00000544972 SH3GLB2Q9NR46 395 aa13.1□□□□□ -0.31
TNC-213ENST00000544972 ZBTB21Q9ULJ3 1066 aa13.1□□□□□ -0.31
TNC-213ENST00000544972 ADAMTS3O15072 1205 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 TOB1P50616 345 aaPredicted RBP13.09□□□□□ -0.31
TNC-213ENST00000544972 TTBK2Q6IQ55 1244 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 LINC00301Q8NCQ3 95 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 GMCL1P1Q8NEA9 526 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 GPCPD1Q9NPB8 672 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.09□□□□□ -0.31
TNC-213ENST00000544972 ATAD5Q96QE3 1844 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 F5H6K3 240 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 STXBP3O00186 592 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 YEATS4O95619 227 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 KRT2P35908 639 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 KLRC3Q07444 240 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 TPRNQ4KMQ1 711 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 EARS2Q5JPH6 523 aaKnown RBP13.09□□□□□ -0.31
TNC-213ENST00000544972 GPATCH4Q5T3I0 446 aaKnown RBP13.09□□□□□ -0.31
TNC-213ENST00000544972 NBPF12Q5TAG4 269 aaPredicted RBP13.09□□□□□ -0.31
TNC-213ENST00000544972 ANO1Q5XXA6 986 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 SLFN13Q68D06 897 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 KCTD1Q719H9 257 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 PIGSQ96S52 555 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 VAT1LQ9HCJ6 419 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 BARHL2Q9NY43 387 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 SYNPO2Q9UMS6 1093 aa13.09□□□□□ -0.31
TNC-213ENST00000544972 NDUFB10O96000 172 aa13.08□□□□□ -0.32
TNC-213ENST00000544972 ECE1P42892 770 aa13.08□□□□□ -0.32
TNC-213ENST00000544972 CCDC96Q2M329 555 aa13.08□□□□□ -0.32
TNC-213ENST00000544972 HOMER1Q86YM7 354 aa13.08□□□□□ -0.32
TNC-213ENST00000544972 ACER1Q8TDN7 264 aa13.08□□□□□ -0.32
TNC-213ENST00000544972 DCAF4Q8WV16 495 aa13.08□□□□□ -0.32
TNC-213ENST00000544972 RRP36Q96EU6 259 aaKnown RBP13.08□□□□□ -0.32
TNC-213ENST00000544972 JMJD4Q9H9V9 463 aa13.08□□□□□ -0.32
TNC-213ENST00000544972 POLR2AP24928 1970 aaKnown RBP13.07□□□□□ -0.32
TNC-213ENST00000544972 FAM205CA6NFA0 338 aa13.07□□□□□ -0.32
TNC-213ENST00000544972 M0R2N6 131 aa13.07□□□□□ -0.32
TNC-213ENST00000544972 SLC16A2P36021 539 aa13.07□□□□□ -0.32
TNC-213ENST00000544972 SLC1A4P43007 532 aa13.07□□□□□ -0.32
TNC-213ENST00000544972 NLRP5P59047 1200 aa13.07□□□□□ -0.32
TNC-213ENST00000544972 PTPAQ15257 358 aa13.07□□□□□ -0.32
TNC-213ENST00000544972 SF3A1Q15459 793 aaKnown RBP13.07□□□□□ -0.32
TNC-213ENST00000544972 NOM1Q5C9Z4 860 aaKnown RBP13.07□□□□□ -0.32
TNC-213ENST00000544972 HEATR3Q7Z4Q2 680 aa13.07□□□□□ -0.32
TNC-213ENST00000544972 APOBEC3FQ8IUX4 373 aaKnown RBP13.07□□□□□ -0.32
TNC-213ENST00000544972 ADGRF4Q8IZF3 695 aa13.07□□□□□ -0.32
TNC-213ENST00000544972 MTMR8Q96EF0 704 aa13.07□□□□□ -0.32
TNC-213ENST00000544972 GMCL1Q96IK5 515 aa13.07□□□□□ -0.32
TNC-213ENST00000544972 GGA3Q9NZ52 723 aa13.07□□□□□ -0.32
TNC-213ENST00000544972 TMX2Q9Y320 296 aa13.07□□□□□ -0.32
TNC-213ENST00000544972 LIG1P18858 919 aa13.06□□□□□ -0.32
TNC-213ENST00000544972 SLC39A14Q15043 492 aa13.06□□□□□ -0.32
TNC-213ENST00000544972 ZSCAN23Q3MJ62 389 aa13.06□□□□□ -0.32
TNC-213ENST00000544972 RILPL1Q5EBL4 403 aa13.06□□□□□ -0.32
TNC-213ENST00000544972 KIAA1755Q5JYT7 1200 aa13.06□□□□□ -0.32
TNC-213ENST00000544972 FAM177A1Q8N128 213 aaPredicted RBP13.06□□□□□ -0.32
TNC-213ENST00000544972 PCDHA7Q9UN72 937 aa13.06□□□□□ -0.32
TNC-213ENST00000544972 USP17L10C9JJH3 530 aa13.06□□□□□ -0.32
TNC-213ENST00000544972 SPTLC2O15270 562 aa13.06□□□□□ -0.32
TNC-213ENST00000544972 RAD21O60216 631 aa13.06□□□□□ -0.32
TNC-213ENST00000544972 ASNSP08243 561 aa13.06□□□□□ -0.32
TNC-213ENST00000544972 CALML3P27482 149 aa13.06□□□□□ -0.32
TNC-213ENST00000544972 STK38Q15208 465 aa13.06□□□□□ -0.32
TNC-213ENST00000544972 GPR162Q16538 588 aa13.06□□□□□ -0.32
TNC-213ENST00000544972 PRAMEF18Q5VWM3 479 aa13.06□□□□□ -0.32
TNC-213ENST00000544972 DAGLBQ8NCG7 672 aa13.06□□□□□ -0.32
TNC-213ENST00000544972 KCNG4Q8TDN1 519 aa13.06□□□□□ -0.32
TNC-213ENST00000544972 NUP88Q99567 741 aaPredicted RBP13.06□□□□□ -0.32
TNC-213ENST00000544972 GLIS2Q9BZE0 524 aaPredicted RBP13.06□□□□□ -0.32
TNC-213ENST00000544972 ZMYND12Q9H0C1 365 aa13.06□□□□□ -0.32
TNC-213ENST00000544972 ARHGEF10LQ9HCE6 1279 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms