RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 FAM196BA6NMK8 535 aa11.24□□□□□ -0.61
CIT-216ENST00000544872 USP17L10C9JJH3 530 aa11.24□□□□□ -0.61
CIT-216ENST00000544872 PDHXO00330 501 aa11.24□□□□□ -0.61
CIT-216ENST00000544872 REC8O95072 547 aa11.24□□□□□ -0.61
CIT-216ENST00000544872 GH2P01242 217 aa11.24□□□□□ -0.61
CIT-216ENST00000544872 FGAP02671 866 aa11.24□□□□□ -0.61
CIT-216ENST00000544872 CHGBP05060 677 aa11.24□□□□□ -0.61
CIT-216ENST00000544872 KCNQ1P51787 676 aa11.24□□□□□ -0.61
CIT-216ENST00000544872 TFF2Q03403 129 aa11.24□□□□□ -0.61
CIT-216ENST00000544872 SKIV2LQ15477 1246 aaKnown RBP11.24□□□□□ -0.61
CIT-216ENST00000544872 CCDC178Q5BJE1 867 aa11.24□□□□□ -0.61
CIT-216ENST00000544872 CNNM2Q9H8M5 875 aa11.24□□□□□ -0.61
CIT-216ENST00000544872 ANO2Q9NQ90 1003 aa11.24□□□□□ -0.61
CIT-216ENST00000544872 PNMA3Q9UL41 463 aa11.24□□□□□ -0.61
CIT-216ENST00000544872 SNCAIPQ9Y6H5 919 aa11.24□□□□□ -0.61
CIT-216ENST00000544872 IRF6O14896 467 aa11.23□□□□□ -0.61
CIT-216ENST00000544872 RANBP6O60518 1105 aaKnown RBP11.23□□□□□ -0.61
CIT-216ENST00000544872 GDF11O95390 407 aa11.23□□□□□ -0.61
CIT-216ENST00000544872 CYP2D6P10635 497 aa11.23□□□□□ -0.61
CIT-216ENST00000544872 ZKSCAN1P17029 563 aaPredicted RBP11.23□□□□□ -0.61
CIT-216ENST00000544872 DNAJB2P25686 324 aa11.23□□□□□ -0.61
CIT-216ENST00000544872 ATP2B2Q01814 1243 aa11.23□□□□□ -0.61
CIT-216ENST00000544872 SPP2Q13103 211 aa11.23□□□□□ -0.61
CIT-216ENST00000544872 IRF5Q13568 498 aa11.23□□□□□ -0.61
CIT-216ENST00000544872 GADL1Q6ZQY3 521 aa11.23□□□□□ -0.61
CIT-216ENST00000544872 STK11IPQ8N1F8 1099 aa11.23□□□□□ -0.61
CIT-216ENST00000544872 ESR2Q92731 530 aa11.23□□□□□ -0.61
CIT-216ENST00000544872 DYNLL2Q96FJ2 89 aa11.23□□□□□ -0.61
CIT-216ENST00000544872 RNPC3Q96LT9 517 aaKnown RBP11.23□□□□□ -0.61
CIT-216ENST00000544872 WDR18Q9BV38 432 aa11.23□□□□□ -0.61
CIT-216ENST00000544872 KRT23Q9C075 422 aa11.23□□□□□ -0.61
CIT-216ENST00000544872 PRDM12Q9H4Q4 367 aa11.23□□□□□ -0.61
CIT-216ENST00000544872 ZBTB21Q9ULJ3 1066 aa11.23□□□□□ -0.61
CIT-216ENST00000544872 BAHCC1Q9P281 2608 aa11.23□□□□□ -0.61
CIT-216ENST00000544872 ZMYM6O95789 1325 aa11.23□□□□□ -0.61
CIT-216ENST00000544872 SGSM2O43147 1006 aa11.22□□□□□ -0.61
CIT-216ENST00000544872 MCCP23508 829 aa11.22□□□□□ -0.61
CIT-216ENST00000544872 GABPAQ06546 454 aa11.22□□□□□ -0.61
CIT-216ENST00000544872 RRP12Q5JTH9 1297 aaKnown RBP11.22□□□□□ -0.61
CIT-216ENST00000544872 USP17L2Q6R6M4 530 aa11.22□□□□□ -0.61
CIT-216ENST00000544872 RALYLQ86SE5 291 aaKnown RBP11.22□□□□□ -0.61
CIT-216ENST00000544872 IQCA1Q86XH1 822 aa11.22□□□□□ -0.61
CIT-216ENST00000544872 MICALL1Q8N3F8 863 aa11.22□□□□□ -0.61
CIT-216ENST00000544872 GOPCQ9HD26 462 aa11.22□□□□□ -0.61
CIT-216ENST00000544872 ANAPC4Q9UJX5 808 aa11.22□□□□□ -0.61
CIT-216ENST00000544872 OGDHLQ9ULD0 1010 aa11.22□□□□□ -0.61
CIT-216ENST00000544872 AFG3L2Q9Y4W6 797 aa11.22□□□□□ -0.61
CIT-216ENST00000544872 CYP2D7A0A087X1C5 515 aa11.21□□□□□ -0.61
CIT-216ENST00000544872 ERICH2A1L162 156 aa11.21□□□□□ -0.61
CIT-216ENST00000544872 RAD21O60216 631 aa11.21□□□□□ -0.61
CIT-216ENST00000544872 HMGCRP04035 888 aa11.21□□□□□ -0.61
CIT-216ENST00000544872 SHMT1P34896 483 aa11.21□□□□□ -0.61
CIT-216ENST00000544872 BACE1P56817 501 aa11.21□□□□□ -0.61
CIT-216ENST00000544872 TFAP4Q01664 338 aa11.21□□□□□ -0.61
CIT-216ENST00000544872 ICA1Q05084 483 aa11.21□□□□□ -0.61
CIT-216ENST00000544872 SART3Q15020 963 aaKnown RBP11.21□□□□□ -0.61
CIT-216ENST00000544872 VPS53Q5VIR6 699 aa11.21□□□□□ -0.61
CIT-216ENST00000544872 ZNF589Q86UQ0 364 aaPredicted RBP11.21□□□□□ -0.61
CIT-216ENST00000544872 PROCA1Q8NCQ7 364 aaPredicted RBP11.21□□□□□ -0.61
CIT-216ENST00000544872 KHSRPQ92945 711 aaKnown RBP eCLIP11.21□□□□□ -0.61
CIT-216ENST00000544872 COA7Q96BR5 231 aa11.21□□□□□ -0.61
CIT-216ENST00000544872 TIFAQ96CG3 184 aa11.21□□□□□ -0.61
CIT-216ENST00000544872 PARK7Q99497 189 aaKnown RBP11.21□□□□□ -0.61
CIT-216ENST00000544872 ESYT1Q9BSJ8 1104 aa11.21□□□□□ -0.61
CIT-216ENST00000544872 KCNH6Q9H252 994 aa11.21□□□□□ -0.61
CIT-216ENST00000544872 PRDM5Q9NQX1 630 aaPredicted RBP11.21□□□□□ -0.61
CIT-216ENST00000544872 KCNH4Q9UQ05 1017 aa11.21□□□□□ -0.61
CIT-216ENST00000544872 IRX3P78415 501 aaPredicted RBP11.2□□□□□ -0.62
CIT-216ENST00000544872 ANKRD23Q86SG2 305 aa11.2□□□□□ -0.62
CIT-216ENST00000544872 CCAR1Q8IX12 1150 aaKnown RBP11.2□□□□□ -0.62
CIT-216ENST00000544872 SMCR8Q8TEV9 937 aaPredicted RBP11.2□□□□□ -0.62
CIT-216ENST00000544872 LPAR1Q92633 364 aa11.2□□□□□ -0.62
CIT-216ENST00000544872 PHOX2BQ99453 314 aa11.2□□□□□ -0.62
CIT-216ENST00000544872 UBAC1Q9BSL1 405 aa11.2□□□□□ -0.62
CIT-216ENST00000544872 EPB41L4AQ9HCS5 686 aaPredicted RBP11.2□□□□□ -0.62
CIT-216ENST00000544872 ISY1Q9ULR0 285 aaKnown RBP11.2□□□□□ -0.62
CIT-216ENST00000544872 CTDP1Q9Y5B0 961 aaPredicted RBP11.2□□□□□ -0.62
CIT-216ENST00000544872 CHD8Q9HCK8 2581 aa11.2□□□□□ -0.62
CIT-216ENST00000544872 OTOFQ9HC10 1997 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 A0A0G2JLL6 359 aaPredicted RBP11.19□□□□□ -0.62
CIT-216ENST00000544872 PI4K2BG5E9Z4 385 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 ORC4O43929 436 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 PRDM1O75626 825 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 TTLL1O95922 423 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 ATN1P54259 1190 aaPredicted RBP11.19□□□□□ -0.62
CIT-216ENST00000544872 HAND2P61296 217 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 CTDSPL2Q05D32 466 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 MTMR2Q13614 643 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 KRT32Q14532 448 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 SEPT2Q15019 361 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 PRRT2Q7Z6L0 340 aaPredicted RBP11.19□□□□□ -0.62
CIT-216ENST00000544872 SLC44A5Q8NCS7 719 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 GTF3C2Q8WUA4 911 aaPredicted RBP11.19□□□□□ -0.62
CIT-216ENST00000544872 STAG1Q8WVM7 1258 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 MAP4K1Q92918 833 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 BADQ92934 168 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 KIAA1683Q9H0B3 1180 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 DNAJC18Q9H819 358 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 SYNPO2Q9UMS6 1093 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 STX8Q9UNK0 236 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms